Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
Uncovering the epigenomic determinants of kidney vascular development [scATAC-seq]
GEO Series GSE218568. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia [scATAC-seq]
GEO Series GSE289851. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [NAMDC_scATAC]
GEO Series GSE217448. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dependence on Bcl6 and Blimp1 identifies distinct mechanisms driving memory and follicular helper CD4+ T cell differentiation [scATAC-Seq]
GEO Series GSE184846. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multiplex profiling of developmental enhancers with quantitative, single-cell expression reporters [scATAC_mEBs]
GEO Series GSE217683. Mus musculus. 4 samples. Type: Other.
scATAC-seq and scRNA-seq of Mouse Mammary Epithelial Cells
GEO Series GSE157890. Mus musculus. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Intestinal secretory differentiation reflects niche-driven phenotypic and epigenetic plasticity of a common signal-responsive terminal cell [scATAC-Seq]
GEO Series GSE271615. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
TCF1 dosage determines cell fate during T cell development. [scATAC-Seq]
GEO Series GSE275377. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Longitudinal single cell transcriptional and epigenetic mapping of effector, memory, and exhausted CD8 T cells reveals shared biological circuits across distinct cell fates [scATAC-Seq 2]
GEO Series GSE199557. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Taz protects aged hematopoietic stem cells from exhaustion [scATAC-seq]
GEO Series GSE157463. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Heterogeneity and Homogeneity in Treg responses to Interleukin-2 [scATAC-seq1: IL2 2h and PBS Ctl]
GEO Series GSE299316. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ecDNA hubs drive cooperative intermolecular oncogene expression [scRNA and scATAC-Seq]
GEO Series GSE160148. Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Longitudinal single cell transcriptional and epigenetic mapping of effector, memory, and exhausted CD8 T cells reveals shared biological circuits across distinct cell fates [scRNA-seq and scATAC-seq c
GEO Series GSE230363. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Enhancing single-cell ATAC sequencing with formaldehyde fixation, cryopreservation, and multiplexing for flexible analysis [scATAC-seq]
GEO Series GSE281809. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo [scATAC-Seq]
GEO Series GSE158196. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Tcell_scATAC_ASAP]
GEO Series GSE217449. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin and gene-regulatory dynamics of mouse nephron progenitors at single-cell resolution [scATAC-Seq]
GEO Series GSE180898. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A novel lineage of RORγt+ antigen presenting cells instructs microbiota-dependent regulatory T cell differentiation and tolerance during early life [multiome scATAC-seq]
GEO Series GSE205065. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Effect of depletion of Bcor, Zc3h12a or both on chromatin accessibility of P14 CD8 T cells at single cell level [scATAC-seq]
GEO Series GSE285184. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A longitudinal single-cell atlas of treatment response in pediatric AML (scATAC-Seq)
GEO Series GSE235308. Homo sapiens. 64 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.