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144 results for “statistical model”
Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations
GEO Series GSE250148. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Statistical and Dynamic Model of Surface Morphology Evolution during Polishing in Additive Manufacturing
<p>This repository maintains data and code associated with our accepted paper in IISE Transactions titled "Statistical and Dynamical Model of Surface Morphology Evolution during Polishing in Additive Manufacturing". To briefly summarize,</p><p><strong>1. Polishing_stagewise_data.zip</strong> - Contains height values measured at 32 different locations on the 3D printed sample using an optical profilometer prior to polishing (Stage 0) and post every stage of polishing (Stages 1 to 6). Please refer to the following paper for experimentation details and process parameters: "<i>Jin, S., A. Iquebal, S. Bukkapatnam, A. Gaynor, and Y. Ding (2019, 10). A Gaussian process model-guided surface polishing process in additive manufacturing. Journal of Manufacturing Science and Engineering 142, 1–17.</i>"</p><p><strong>2. Initial_surface_generation.m</strong> - Script containing the Initial surface generation algorithm using the random circle packing algorithm. This file generates the surface asperity distribution and their graph connectivity of a 3D printed sample prior to polishing (Figure 4(b) in paper). One such realization is stored and compared with experimental data (Refer #3).</p><p><strong>3. Stage0_fitted_data.mat</strong> - .mat file containing data pertaining to height measures of the 3D printed sample prior to polishing and generated initial surface (simulation) which is statistically similar to the actual data.</p><p><strong>4. Parameter_fitting_Polishing.m</strong> - Script containing the model capturing polishing dynamics with network formation, evaluated at each stage of polishing. This file generates the Bearing Area Curves of the initial surface simulated after each stage of polishing and compares them with experimental data (Figures 3, 5, 6, 7, and 8 in paper). (The script makes use of other functions defined in #5).</p><p><strong>5. surface_roughness.m, graph_evolution.m, solve_for_d.m, KLDiv.m</strong> and <strong>Gen_hurst.m</strong> - Matlab scripts containing functions that are called within the main script (Parameter_fitting_Polishing.m)</p><p><strong>6. Simulated_Annealing.zip</strong> - A zip file containing files related to Simulated Annealing Algorithm. Please read the <strong>README_Simulated_Annealing.txt</strong> for instructions to reproduce the optimized parameter solutions.</p><p><strong>7. pub_fig.m</strong> - Script containing the formatting options for plots and figures.</p>
Improving inference in wastewater-based epidemiology by modelling the statistical features of digital PCR
<p>This repository contains the simulation code, data, and analysis scripts of the study "Improving inference in wastewater-based epidemiology by modelling the statistical features of digital PCR". The code can be used to reproduce all figures and numerical results in the paper.</p>
Thesis: Locate and understand the mortality risk of forest tree under climate change. A multi-scale approach combining statistical and mechanistic modeling
<p>Data and tables in chapters 2 and 3 of the thesis</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.