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FIGURE 8 in Hiding in plain sight on Gunung Muria: A new species and first record of rock gecko (Cnemaspis Strauch, 1887; Squamata, Gekkonidae) from Java, Indonesia
FIGURE 8. The habitat type of Cnemaspis muria sp. nov. in Kajar village, Dawe District, Kudus Regency in Gunung Muria. (A) Large rocks in a small river and (B) Large rock in a coffee plantation. Photos by A. I. S. Martamenggala.
FIGURE 3 in Taxonomizing a truly morphologically cryptic complex of dwarf geckos from Madagascar: molecular evidence for new species-level lineages within the Lygodactylus tolampyae complex
FIGURE 3. Haplotype networks calculated from phased sequences of five nuclear-encoded protein-coding gene fragments (including two non-overlapping fragments of the RAG1 gene analyzed separately) for samples of the L. tolampyae complex. Based on alignments of 834 bp for 68 samples (KIAA1239), 466 bp for 65 samples (PRLR), 318 bp for 51 samples (CMOS), 307 bp for 43 samples (RAG1-B), and 818 bp for 52 samples (RAG1-V). Colours correspond to those used for mitochondrial lineages of the respective samples.
FIGURE 1 in Finaritra! A splendid new leaf-tailed gecko (Uroplatus) species from Marojejy National Park in north-eastern Madagascar
FIGURE 1. (a) Bayesian inference phylogenetic tree of the Uroplatus ebenaui group based on a 2326 bp alignment of four concatenated mitochondrial gene fragments (ND4, 12S rRNA, 16S rRNA, COX1). Only posterior probability values of 0.94 or greater are displayed at nodes. An outgroup (U. alluaudi) was used for rooting but omitted from the tree for graphical reasons. (b) Haplotype network independently calculated from sequences of the nuclear gene c-mos.
FIGURE 4 in A new species of Phyllurus leaf-tailed gecko (Lacertilia: Carphodactylidae) from The Pinnacles, north-east Australia
FIGURE 4. Holotypes of (A) P. pinnaclensis sp. nov. (QMJ96418) and (B) P. gulbaru (QMJ75778) (photo: Conrad Hoskin).
FIGURE 6 in Diversification in the mountains: a generic reappraisal of the Western Ghats endemic gecko genus Dravidogecko Smith, 1933 (Squamata: Gekkonidae) with descriptions of six new species
FIGURE 6. Holotype of D. anamallensis. A) Full-body dorsal B) Head dorsal C) Head lateral D) Head ventral. Scale bar = 10 mm.
FIGURE 4. A in Diversification in the mountains: a generic reappraisal of the Western Ghats endemic gecko genus Dravidogecko Smith, 1933 (Squamata: Gekkonidae) with descriptions of six new species
FIGURE 4. A) In-situ photograph of an uncollected specimen of D. anamallensis B) Cloacal region showing precloacofemoral pores in an uncollected specimen of D. anamallensis C) Undivided lamellae on the right manus of D. septentrionalis sp. nov.
FIGURE 7 in A new species of rock-dwelling gecko (Gekkonidae: Gehyra) from the Mt Surprise region of northern Queensland, Australia
FIGURE 7. Comparison of (A) Gehyra electrum sp. nov. (SMZ0974), (B) G. einasleighensis (uncollected), and (C) G. catenata (uncollected). Photos: Stephen Zozaya.
APPENDIX. Comparative material of Gehyra dubia (n=25) from northern Queensland examined for morphological comparison. in A new species of rock-dwelling gecko (Gekkonidae: Gehyra) from the Mt Surprise region of northern Queensland, Australia
APPENDIX. Comparative material of Gehyra dubia (n=25) from northern Queensland examined for morphological comparison.
Fig. 3 in Resurrection of the Comoran fish scale gecko Geckolepis humbloti Vaillant, 1887 reveals a disjunct distribution caused by natural overseas dispersal
Fig. 3 Map created in QGIS 2.8.1 showing the known distribution of Geckolepis humbloti. Colored dots represent known localities: Red = Anjouan, blue = Mohéli, green = Mayotte, yellow = Grand Comoro, black = Madagascar (Tsingy de Bemaraha). In addition to the samples used in this study, locality data was taken from Hawlitschek et al. (2011), Hawlitschek and Glaw (2014), and Wang et al. (2015). Inlay shows the position in the context of the African continent
Fig. 2 in Morphology and molecules reveal two new species of the poorly studied gecko genus Paragehyra (Squamata: Gekkonidae) from Madagascar
Fig. 2 Paragehyra austini sp. nov., male holotype (ZSM 339/ 2005) (above) in dorsal and ventral view. In the dorsal view, the absence of enlarged tubercles along the body and limbs and on the tail (characters BT, TDL, and TT) is evident; while in the ventral view, the uniform smooth surface characterised by pigmented scales along the body, limbs and tail (characters VE and SC) is visible. Paragehyra felicitae sp. nov., male holotype (ZSM 1611/2010) (below) in dorsal and ventral view. In the dorsal view, it is possible to observe the 12 longitudinal rows of enlarged tubercles (character BT), and the presence of enlarged tubercles on the distal and proximal segments of the limbs (TDL) and on the dorsal surface of tail (character TT). In the ventral view, the uniform smooth surface characterised by unpigmented scales along the body and the limbs (character VE) and by pigmented scales along the ventral surface of tail (character SC) is shown
Fig. 1 a in Morphology and molecules reveal two new species of the poorly studied gecko genus Paragehyra (Squamata: Gekkonidae) from Madagascar
Fig. 1 a Paragehyra petiti from near Toliara; b Paragehyra felicitae sp. nov., male holotype (ZSM 1611/2010) from Anja reserve; c Paragehyra gabriellae from eastern slopes of Andohahela; d Paragehyra austini sp. nov., male holotype (ZSM 339/2005) from Grotte Ampasy (near Esomony), showing colouration in life
Fig. 6 in Northern origin and diversification in the central lowlands? - Complex phylogeography and taxonomy of widespread day geckos (Phelsuma) from Madagascar
Fig. 6 Median-joining network of 32 RAG-1 haplotypes of the Phelsuma lineata subgroup (P. dorsivittata, red; P. l. lineata, green; P. l. elanthana, yellow; P. l. punctulata, orange; P. lineata (St. Luce), blue). The consensus network of all the shortest trees is shown. Numbers denote unique haplotypes; black dots are median vectors or presumed unsampled or missing intermediates; size is proportional to their frequencies
Fig. 4 in Northern origin and diversification in the central lowlands? - Complex phylogeography and taxonomy of widespread day geckos (Phelsuma) from Madagascar
Fig. 4 Map of central eastern Madagascar showing the detailed distribution of haplotypes of P. l. lineata (squares and diamonds) and P. l. elanthana (circles) along the Mangoro and Nosivolo Rivers (blue lines). Colors are in accordance with major mtDNA clades as identified by phylogenetic analyses (light green squares: northern P. l. lineata; dark green diamonds: southern P. l. lineata)
Fig. 5 in Northern origin and diversification in the central lowlands? - Complex phylogeography and taxonomy of widespread day geckos (Phelsuma) from Madagascar
Fig. 5 Results of Phylomapper and Bayesian skyline plot (BSLP) analysis. (i) A simplified phylogram of the Phelsuma lineata subgroup; symbols indicate the nodes that were used for the BSLP analyses. (ii) Results of the Phylomapper analysis showing the 95 % confidence surface of the center of origin of different P. lineata subgroup clades calculated with one dispersal class and three dispersal classes (for details see text). (iii) Bayesian skyline plots for selected major mtDNA clades of the Phelsuma lineata subgroup. The x-axis is in units of years from the past to the present, and the y-axis is the estimated effective population size. The thick solid line is the median estimate of the demographic history; the blue underlay is the estimated median and 95 % HPD limits of the posterior distribution of the demographic history (see text for details)
Fig. 2 in Diversification of Hemidactylus geckos (Squamata: Gekkonidae) in coastal plains and islands of southwestern Arabia with descriptions and complete mitochondrial genomes of two endemic species to Saudi Arabia
Fig. 2 Phylogenetic network resulting from the SplitsTree analysis. Species are highlighted with colors that match those in Figs. 1, 3, and 7. The branch leading to the outgroup has been truncated, which is indicated by its transparency. Bootstrap values are shown for major clades
Fig. 6 in Diversification of Hemidactylus geckos (Squamata: Gekkonidae) in coastal plains and islands of southwestern Arabia with descriptions and complete mitochondrial genomes of two endemic species to Saudi Arabia
Fig. 6 Paratypes of H. almakhwah sp. n. in life and the species' type locality. A – adult male NMP 76093/6; B – subadult NMP 76093/3; C – adult female NMP 76093/4; D – subadult NMP 76093/5; E and F – the type locality, a dry wadi SW of Al Ju'aydah (19.657°N, 41.567°E)
Fig. 4 in Diversification of Hemidactylus geckos (Squamata: Gekkonidae) in coastal plains and islands of southwestern Arabia with descriptions and complete mitochondrial genomes of two endemic species to Saudi Arabia
Fig. 4 Maps of the complete mitochondrial genomes of the holotypes of H. almakhwah sp. n., H. farasani sp. n., H. mandebensis, and H. ulii. Protein-coding genes are denoted with yellow and green annotations, rRNA genes with red annotations, tRNA genes with pink annotations, and the control region with orange annotations. Voucher
TABLE 1 in Cyrtodactylus panitvongi, a new cave-dwelling Bent-toed Gecko from Lopburi Province, central Thailand (Squamata: Gekkonidae)
<p><b>TABLE 1.</b> Meristic and morphometric (in mm) data for the type series of <i>Cyrtodactylus panitvongi</i> <b>sp. nov.</b> Paired meristic characters are given left/right; paired measurements are given for the right side. NA = not assessed / not available.</p><table><tbody><tr><th></th><th>Holotype, CUMZ-R-2596</th><th>Paratype, CUMZ-R-2597</th><th>Paratype, CUMZ-R-2594</th><th>Paratype, CUMZ-R-2595</th></tr></tbody><tbody><tr><th>Sex</th><td>Male</td><td>Male</td><td>Female</td><td>Female</td></tr><tr><th>SVL</th><td>74.0</td><td>77.0</td><td>85.0</td><td>84.4</td></tr><tr><th>TrunkL</th><td>43.5</td><td>45.7</td><td>52.6</td><td>49.0</td></tr><tr><th>AG</th><td>29.0</td><td>35.4</td><td>38.4</td><td>35.3</td></tr><tr><th>TailL</th><td>93.3 (original)</td><td>76.0 (68.3 regenerated)</td><td>88.5 (63.6 regenerated)</td><td>91.4 (original)</td></tr><tr><th>TailW</th><td>7.3</td><td>7.2</td><td>7.2</td><td>8.4</td></tr><tr><th>HeadL</th><td>22.1</td><td>24.4</td><td>24.4</td><td>25.3</td></tr><tr><th>HeadW</th><td>14.5</td><td>16.0</td><td>17.7</td><td>16.4</td></tr><tr><th>HeadD</th><td>9.5</td><td>9.2</td><td>10.3</td><td>10.7</td></tr><tr><th>RosW</th><td>3.8</td><td>3.7</td><td>3.6</td><td>3.9</td></tr><tr><th>RosH</th><td>2.0</td><td>1.5</td><td>1.9</td><td>1.9</td></tr><tr><th>MenW</th><td>2.9</td><td>2.9</td><td>3.2</td><td>3.1</td></tr><tr><th>MenL</th><td>1.8</td><td>1.8</td><td>2.3</td><td>2.9</td></tr><tr><th>InterN</th><td>2.3</td><td>2.8</td><td>2.5</td><td>2.7</td></tr><tr><th>SnOrb</th><td>9.1</td><td>9.5</td><td>9.5</td><td>9.6</td></tr><tr><th>NosOrb</th><td>6.3</td><td>6.7</td><td>6.3</td><td>7.0</td></tr><tr><th>OrbD</th><td>7.7</td><td>7.5</td><td>8.2</td><td>7.2</td></tr><tr><th>InterOrb</th><td>3.8</td><td>3.9</td><td>4.2</td><td>4.1</td></tr><tr><th>OrbEar</th><td>6.2</td><td>6.9</td><td>7.6</td><td>7.1</td></tr><tr><th>EarL</th><td>0.8</td><td>0.8</td><td>1.3</td><td>0.9</td></tr><tr><th>NeckW</th><td>6.7</td><td>6.8</td><td>8.7</td><td>9.7</td></tr><tr><th>FaL</th><td>10.9</td><td>11.3</td><td>11.0</td><td>10.8</td></tr><tr><th>TibL</th><td>15.4</td><td>14.6</td><td>15.3</td><td>15.8</td></tr><tr><th>DigitL I–V</th><td>4.4–5.9–6.6–6.8–6.1</td><td>4.3–NA–5.8–6.2–6.0</td><td>5.6–6.1–7.8–7.8–6.4</td><td>4.8–6.3–7.2–7.2–6.5</td></tr><tr><th>Relative DigitL</th><td>IV> III> V> II> I</td><td>NA</td><td>IV = III> V> II> I</td><td>IV = III> V> II> I</td></tr><tr><th>ToeL I–V</th><td>4.0–6.5–7.2–7.6–7.5</td><td>4.0–6.3–6.9–7.7–7.3</td><td>5.1–7.1–7.4–8.4–7.7</td><td>5.3–6.4–6.3–8.4–8.2</td></tr><tr><th>Relative ToeL</th><td>IV> V> III> II> I</td><td>IV> V> III> II> I</td><td>IV> V> III> II> I</td><td>IV> V> II> III> I</td></tr><tr><th>SL</th><td>10/11</td><td>11/10</td><td>10/12</td><td>12/11</td></tr><tr><th>SLMOrb</th><td>8/7</td><td>8/8</td><td>8/8</td><td>9/8</td></tr><tr><th>IL</th><td>11/10</td><td>10/11</td><td>9/10</td><td>9/10</td></tr><tr><th>InterCilS</th><td>37</td><td>37</td><td>37</td><td>35</td></tr><tr><th>InterOrbS</th><td>18</td><td>17</td><td>15</td><td>18</td></tr><tr><th>DigitLa I–V (left manus)</th><td>(5+10)–(4+10)–(4+12)– (5+12)–(6+11)</td><td>(4+8)–(4+10)–(4+11)– (5+11)–(4+10)</td><td>(4+9)–(4+10)–(4+12)– (5+10)–(5+9)</td><td>(4+8)–(4+9)–(4+12)– (4+10)–(4+9)</td></tr><tr><th>DigitLa I–V (right manus)</th><td>(5+10)–(4+12)–(4+12)– (5+10)–(6+11)</td><td>(3+7)–(4+9)–(4+13)– (5+11)–(4+11)</td><td>(4+7)–(4+8)–(4+11)– (5+9)–(5+9)</td><td>(4+7)–(4+7)–(4+10)– (4+11)–(4+9)</td></tr><tr><th>ToeLa I–V (left pes)</th><td>(3+10)–(4+11)–(5+14)– (6+13)–(5+15)</td><td>(4+9)–(4+9)–(4+10)– (6+10)–(5+9)</td><td>(3+9)–(4+10)–(5+11)– (6+12)–(4+12)</td><td>(3+8)–(4+9)–(4+12)– (6+11)–(5+12)</td></tr><tr><th>ToeLa I–V (right pes)</th><td>(3+10)–(4+11)–(5+13)– (6+12)–(6+15)</td><td>(5+10)–(4+11)–(4+14)– (5+13)–(5+14)</td><td>(3+8)–(4+10)–(4+12)– (6+11)–(5+12)</td><td>(3+9)–(3+8)–(3+12)– (5+12)–(5+12)</td></tr><tr><th>DTR</th><td>18</td><td>18</td><td>18</td><td>18</td></tr><tr><th>PV</th><td>30</td><td>32</td><td>33</td><td>29</td></tr><tr><th>PV’</th><td>23</td><td>24</td><td>25</td><td>22</td></tr><tr><th>VentR</th><td>42</td><td>40</td><td>42</td><td>40</td></tr><tr><th>FemPreEnSc</th><td>13+13 (diastema 1 scale)</td><td>14+14 (diastema 1 scale)</td><td>34 (no diastema)</td><td>32 (no diastema)</td></tr><tr><th>FemPre Po/Pi</th><td>2 PrePo+2 PrePo</td><td>2 PrePo+2 PrePo</td><td>6 PrePi</td><td>6 PrePi</td></tr><tr><th>Postcloacal spurs</th><td>2/2</td><td>3/2</td><td>2/2</td><td>3/2</td></tr></tbody></table><p>characters are given left/right; paired measurements are given for the right side. NA = not assessed / not available.</p>
FIGURE 2 in Who's your daddy? On the identity and distribution of the paternal hybrid ancestor of the parthenogenetic gecko Lepidodactylus lugubris (Reptilia: Squamata: Gekkonidae)
FIGURE 2. Bayesian consensus tree of the species of the Lepidodactylus lugubris Group (sensu Oliver et al. 2018) estimated using the mitochondrial ND2 gene with outgroup clades removed. Node support is indicated with posterior probability on the left and maximum-likelihood ultrafast bootstraps on the right, and solid circles on nodes supported by greater than both 95% posterior probability and 95% bootstrap score. Lepidodactylus pantai from the Kei Islands is highlighted in blue. The paternal hybrid ancestor of Lepidodactylus lugubris—as documented by Radtkey et al. (1995)—is highlighted in red. The maternal hybrid ancestor of L. lugubris is L. moestus, as determined by its mtDNA identity with L. lugubris.
FIGURE 1 in Phylogenetic relationships of the gecko genus Carinatogecko (Reptilia: Gekkonidae)
FIGURE 1. Phylogenetic tree based on partial sequences of the cytochrome b and 12S rRNA (PRANK alignment) genes constructed by Bayesian inference (topology only, see Červenka et al. 2008 for further information). In the box, detailed view of Mediodactylus clade, scores at nodes represent: MP bootstrap values – ClustalX alignment / MP bootstrap values – PRANK alignment / BI posterior probability – ClustalX alignment / BI posterior probability – PRANK alignment; nd indicates branch which is not present in respective tree.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.