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3,292 results for “DNA Barcode”
FIGURES 52–54 in Descriptions of two new species of Hemileucinae (Lepidoptera: Saturniidae) from the region of Muzo in Colombia-evidence from morphology and DNA barcodes
FIGURES 52–54. Female genitalia patterns of Cerodirphia zulemae n. sp. 52. Genitalia of the Allotype, dorsal view (genitalia prep. TD#184); 53. Idem, ventral view; 54. Idem, lateral view.
FIGURE 2 in Descriptions of two new species of Hemileucinae (Lepidoptera: Saturniidae) from the region of Muzo in Colombia-evidence from morphology and DNA barcodes
FIGURE 2. Strict consensus of the 9 most parsimonious trees (L=244, CI=75, RI=89) obtained from the phylogenetic analysis of the DNA barcode sequences for the specimens of the genus Cerodirphia. Each specimen is identified by its ProcessID code (see Table 1). Branch length is proportional to the number of substitutions, and values above branches are the number of inferred changes (FAST optimization) and bootstrap supports, respectively.
FIGURE 6 in Are Bryodrilus parvus Nurminen, 1970 and Bryodrilus librus (Nielsen and Christensen, 1959) (Annelida: Enchytraeidae) really different species? A revision based on DNA barcodes and morphological data
FIGURE 6. Type materials of B. parvus. A–C: type 107432, 6D: type 107433. (In clove oil.). A. Segments IV–VI (phg = pharyngeal glands, oesophageal appendages in VI marked with white arrows, spermathecae marked with black arrows). B. Sperm funnels (marked with black arrows). C. Clitellar glands, dorsal view. D. Clitellar glands, ventral view (m = male copulatory organs). Lack of ventral glands marked with black arrow.
FIGURE 4. A in Are Bryodrilus parvus Nurminen, 1970 and Bryodrilus librus (Nielsen and Christensen, 1959) (Annelida: Enchytraeidae) really different species? A revision based on DNA barcodes and morphological data
FIGURE 4. A. Nephridium in 9/10, ectal duct originates medioventrally (marked with black arrow). Stained, on slide. Ellef Island, Canada. B. Nephridia in posterior segments, ectal duct originates posteroventrally (marked with black arrow, i = intestine). In vivo. Mezőföld, Hungary. C. Coelomocytes (marked with black arrow). In vivo. Kiskunság, Hungary. D. Coelomocytes (marked with black arrows). In vivo. Russebukta, Svalbard. E. Sperm funnel (marked with black arrow) Stained, on slide. Ellef Island, Canada. F. Sperm funnel (marked with black arrow) In vivo. Mezőföld, Hungary.
FIGURE 2. A in Are Bryodrilus parvus Nurminen, 1970 and Bryodrilus librus (Nielsen and Christensen, 1959) (Annelida: Enchytraeidae) really different species? A revision based on DNA barcodes and morphological data
FIGURE 2. A. Lateral and ventral chaetal bundles in IX–X. In vivo. Mezőföld, Hungary. B. Epidermal glands in transversal rows. In vivo. Kiskuság, Hungary. C. Clitellar glands, dorsal view. In vivo. Mezőföld, Hungary. D. Clitellar glands, dorsal view. Hyalin gland cells are dominant. Unstained, on slide. Fairbanks, Alaska. E. Ventral view of clitellar glands between the male copulatory organs. m= penial bulbs, black arrow shows the area without granular gland cells. Stained, on slide. Blåbukta, Svalbard. F. Clitellar glands, ventral view. Granular gland cells are present occasionally between the 2 male copulatory organs. Gland cells marked with black arrow, m= male copulatory organs. Stained, on slide. Zackenberg, Greenland.
FIGURE 1 in Are Bryodrilus parvus Nurminen, 1970 and Bryodrilus librus (Nielsen and Christensen, 1959) (Annelida: Enchytraeidae) really different species? A revision based on DNA barcodes and morphological data
FIGURE 1. Neighbor joining tree (K2P) based on the COI 5' of 20 individuals among 4 species of the genus Bryodrilus. Bootstrap support values showed on the branches.
FIGURES 1–7 in Picobia dziabaszewskii sp. nov. (Acari, Syringophilidae)-combined description (morphology with DNA barcode data) of a new quill mite species parasitizing Garrulax formosus (Passeriformes: Leiothrichidae)
FIGURES 1–7. Picobia dziabaszewskii sp. nov. Female. 1—dorsal view. 2—ventral view, 3—hypostomal apex, 4—peritremes, 5—propodonotal setae vi, 6—terminal opisthosoma in ventral view, 7—claws of leg III. Scale bars: 1, 2 =100 µm; 3, 4, 5,7 = 25 µm; 6 = 50µm.
FIGURE 2 in An example of problems associated with DNA barcoding in tardigrades: a novel method for obtaining voucher specimens
FIGURE 2. Granulated cuticle and pores in a fresh (A, DIC) and an orcein stained (B, PhC) specimen of M. terminalis (C2868); C: Granulated cuticle (arrow head) and pores by SEM in M. terminalis (C2868); D: Smooth cuticle with pores in a fresh specimen of M. macrocalix (C2868, DIC); E: Granulated cuticle (arrow head) in the holotype of M. terminalis (C624- S60, DIC). Bar =10 µm (A, B, D, E); 5 µm (C)
FIGURE 1. A in An example of problems associated with DNA barcoding in tardigrades: a novel method for obtaining voucher specimens
FIGURE 1. A: Fresh specimen of M. terminalis; buccal pharyngeal apparatus with dorsal buccal armature (C2868, DIC); B: Fresh specimen of M. macrocalix; buccal pharyngeal apparatus with dorsal buccal armature (C2868, DIC). C: Claws with indented lunules on a hind leg of M. terminalis (C2868, SEM); D: Claws with indented lunules (arrow heads) on the hind legs of a fresh specimen of M. terminalis (C2868, DIC). Bar =10 µm (A, B, D); 5 µm (C)
FIGURE 1 in Redescription of Sphenanthias whiteheadi Talwar (Perciformes: Cepolidae) with DNA barcodes from the southern coasts of India
FIGURE 1. Map of the location of the fisheries harbour and trawl area where the specimens of Sphenanthias whiteheadi were collected.
FIGURE 5 in An example of problems associated with DNA barcoding in tardigrades: a novel method for obtaining voucher specimens
FIGURE 5. Neighbor joining dendrogram computed on Kimura 2-parameter distances. Numbers in bold indicate bootstrap values. Specimens are indicated with either GenBank accession numbers or with acronyms as in Table 1 (in bold).
FIGURE 3. A in An example of problems associated with DNA barcoding in tardigrades: a novel method for obtaining voucher specimens
FIGURE 3. A: Egg shell of M. terminalis (hologenophore C2868-N02 US2, DIC); B: Egg shell of M. terminalis by SEM (C2868); C: Egg shell of a M. terminalis paratype (C624-S44, PhC); D: Egg shell of M. cf. terminalis (C2341, PhC). Bar =10 µm (A, C, D); 1 µm (B).
FIGURE 9 in A new cryptic species allied to Plestiodon japonicus (Peters, 1864) (Squamata: Scincidae) from eastern Japan, and diagnoses of the new species and two parapatric congeners based on morphology and DNA barcode
FIGURE 9. Typical coloration of P. finitimus juveniles (live, anesthetized). Upper: KUZ R60220, lower: KUZ R60221.
FIGURE 6. A in A new cryptic species allied to Plestiodon japonicus (Peters, 1864) (Squamata: Scincidae) from eastern Japan, and diagnoses of the new species and two parapatric congeners based on morphology and DNA barcode
FIGURE 6. A neighbor-joining tree based on Kimura's two-parameter genetic distances of the COI DNA sequences between the 18 observed haplotypes from the 30 specimens. The number at each tip of the tree represents the locality corresponding to those in Fig. 1. The numbers in parentheses indicate the numbers of individuals from the same localities sharing particular haplotypes. The haplotypes with asterisks are those possessed by the holotype of Plestiodon finitimus and the topotypes of P. latiscutatus and P. japonicus. The numbers near the interior branches are bootstrap probabilities from 500 pseudoreplicates.
FIGURE 5 in A new cryptic species allied to Plestiodon japonicus (Peters, 1864) (Squamata: Scincidae) from eastern Japan, and diagnoses of the new species and two parapatric congeners based on morphology and DNA barcode
FIGURE 5. Distribution of genetic distances calculated from 658-bp mtDNA COI fragment within and between species. Thick lines indicate the means, whiskers indicate the minimum and maximum values, and boxes indicate the ranges from the 25th–75th percentiles.
FIGURE 4 in A new cryptic species allied to Plestiodon japonicus (Peters, 1864) (Squamata: Scincidae) from eastern Japan, and diagnoses of the new species and two parapatric congeners based on morphology and DNA barcode
FIGURE 4. Observed major character states of postlabial (PL) scales. sl: last supralabial; t: lower tertiary temporal; p: postlabial.
FIGURE 2 in A new cryptic species allied to Plestiodon japonicus (Peters, 1864) (Squamata: Scincidae) from eastern Japan, and diagnoses of the new species and two parapatric congeners based on morphology and DNA barcode
FIGURE 2. Observed major character states in arrangement of postnasal, supralabial, anterior loreal, and posterior loreal (PN) scales. p: postnasal; sl: supralabial; a: anterior loreal; po: posterior loreal.
FIGURE 3 in A new cryptic species allied to Plestiodon japonicus (Peters, 1864) (Squamata: Scincidae) from eastern Japan, and diagnoses of the new species and two parapatric congeners based on morphology and DNA barcode
FIGURE 3. Observed major character states in arrangement of prefrontal, frontonasal, and frontal (PF) scales. A few specimens exhibited an intermediate state between the A and B type. pf: prefrontal; fn: frontonasal; f: frontal.
FIGURE 10 in Dichrorampha dinarica, new species, a century of confusion in European lepidopterology (Lepidoptera: Tortricidae) resolved by combining morphology and DNA barcoding
FIGURE 10. Neighbor Joining tree (Kimura 2 parameter, built with MEGA 5; cf. Tamura et al. 2011), only sequences (>600 bp) considered. Width of triangles represent sample size, depth the genetic variation within the cluster. Source: DNA Barcode data from BOLD (Barcode of Life Database, cf. Ratnasingham & Hebert 2007).
FIGURES 7–8 in Dichrorampha dinarica, new species, a century of confusion in European lepidopterology (Lepidoptera: Tortricidae) resolved by combining morphology and DNA barcoding
FIGURES 7–8. Male genitalia (everted vesica/cornuti) of Dichrorampha. 7, D. rilana Drenowsky; 8, D. dinarica sp. n., paratype. a, dorsal view of phallus; b, lateral (right) view of phallus; c, lateral view of cornutus; d, dorsal view of cornutus.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.