Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

8,071

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

8,071 results for “transcriptome analysis”

Learn how ShareScore rates datasets ↗
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Elf4fl/fl-Villin-Cre distal colon Transcriptomes

GEO Series GSE164355. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo24/100

RNA-Seq Analysis of Periocular Neural Crest and Embryonic Corneal Transcriptomes

GEO Series GSE120434. Gallus gallus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2019View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and YTHDF2 KD human umbilical cord blood CD34+ cell Transcriptomes

GEO Series GSE107956. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2018View details →
geo24/100

Global transcriptome analysis reveals major roles for protein quality control, autophagy, and reactive oxygen species scavenging during the acquisition of desiccation tolerance in the resurrection pla

GEO Series GSE53058. Dorcoceras hygrometricum. 24 samples. Type: Expression profiling by array.

openGEO-OpenDec 2013View details →
geo24/100

Pollination type recognition from a distance in the ovary is revealed by a global transcriptomic analysis.

GEO Series GSE21957. Solanum chacoense. 102 samples. Type: Expression profiling by array.

openGEO-OpenMay 2010View details →
geo24/100

Single-cell transcriptomic analysis of the scrib mutant wing imaginal discs

GEO Series GSE130566. Drosophila melanogaster. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo24/100

Analysis of transcriptome response of rhizobia to aluminium toxicity

GEO Series GSE193556. Rhizobium phaseoli. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2022View details →
geo24/100

Transcriptome Analysis of Tomato Genotypes in Response to Bacterial spot (Xanthomonas perforans) Race T4 Inoculation

GEO Series GSE135232. Solanum lycopersicum. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo24/100

Single cell transcriptome analysis of non-neuronal cell populations in mouse brain cortex

GEO Series GSE133283. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2022View details →
geo24/100

Transcriptomic analysis of miR-19a-19b-20a subcluster-overexpressed fibroblasts in bleomycin-induced lung fibrosis

GEO Series GSE100116. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2018View details →
geo24/100

Transcriptome analysis of CHAF1B depletion in Akata EBV+ Burkitt Lymphoma cells

GEO Series GSE148910. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2020View details →
geo24/100

Analysis of the global transcriptome of 'sijimi' longan (Dimocarpus longan Lour.) using Illumina paired-end sequencing

GEO Series GSE84467. Dimocarpus longan. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2017View details →
geo24/100

Pilot transcriptome analysis of human iPSC-derived healthy control vs. schizophrenia cortical interneurons

GEO Series GSE125805. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2019View details →
geo24/100

Whole transcriptome analysis of resveratrol and metformin improving high fat diet induced insulin resistance

GEO Series GSE178415. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2021View details →
geo24/100

Transcriptomic Analysis of THP-1 Cells Electroporated with GFP-EV or GFP-SARS-CoV-2-ORF6

GEO Series GSE249500. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2024View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of PSKγ1ox and control Transcriptomes

GEO Series GSE121567. Arabidopsis thaliana. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2019View details →
geo24/100

Transcriptome analysis of cellobiose-positive isolates of L. lactis MG1363

GEO Series GSE103707. Lactococcus cremoris. 16 samples. Type: Expression profiling by array.

openGEO-OpenSep 2017View details →
geo24/100

Quantitative analysis of primary human and pluripotent stem cell-derived brain microvascular endothelial cells transcriptomes via next generation sequencing

GEO Series GSE97575. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2017View details →
geo24/100

Quantitative analysis of hippocampal transcriptomes of naïve and post-status epilepticus (SE) mouse with or without levetiracetam (LEV).

GEO Series GSE205373. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2022View details →
geo24/100

Transcriptomic Analysis of the Regulation of Cancer Stemness in Breast Ductal Carcinoma In Situ by Vitamin D Compounds

GEO Series GSE148548. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.

openGEO-OpenJun 2020View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record