Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

429

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

429 results for “Differential methylation”

Learn how ShareScore rates datasets ↗
geo24/100

Progressive chromatin condensation and H3K9 methylation regulate the differentiation of embryonic and hematopoietic stem cells

GEO Series GSE73221. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2016View details →
geo24/100

A core of differentially methylated CpG loci in gMDSCs isolated from neonatal and adult sources

GEO Series GSE231417. Homo sapiens. 14 samples. Type: Methylation profiling by array.

openGEO-OpenMay 2023View details →
geo24/100

Single-cell m6A profiling in the mouse brain uncovers cell type-specific RNA methylomes and age-dependent differential methylation [GLORI]

GEO Series GSE267627. Mus musculus. 4 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenSep 2024View details →
geo24/100

Detection of aberrant DNA methylation in undifferentiated and differentiated mouse ES cells compared to normal tissues

GEO Series GSE23953. Mus musculus. 34 samples. Type: Methylation profiling by genome tiling array.

openGEO-OpenJan 2016View details →
geo24/100

DNA methylation analysis during in vitro myogenic differentiation

GEO Series GSE55571. Homo sapiens. 7 samples. Type: Methylation profiling by genome tiling array.

openGEO-OpenSep 2014View details →
geo24/100

Differential DNA Methylation Associated with Sexual Partner Preferences in Rams

GEO Series GSE158287. Ovis aries. 9 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenMay 2022View details →
geo24/100

Recurrent Variations in DNA Methylation in Human Pluripotent Stem Cells and their Differentiated Derivatives [Illumina HT12v3 Gene Expression]

GEO Series GSE30652. Homo sapiens. 239 samples. Type: Expression profiling by array.

openGEO-OpenMay 2012View details →
geo24/100

m6A mRNA Methylation Facilitates Resolution of Naïve Pluripotency Towards Differentiation

GEO Series GSE61998. Mus musculus. 45 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenNov 2014View details →
geo24/100

Epigenetic changes play a role in regulating the epithelial-mesenchymal transition in human trophoblast differentiation [Methylation array]

GEO Series GSE259304. Homo sapiens. 12 samples. Type: Methylation profiling by genome tiling array.

openGEO-OpenJul 2024View details →
geo24/100

The SAMD1 transcription factor coordinates hematopoietic lineage differentiation and H3K4 methylation status [CUT&RUN]

GEO Series GSE280393. Homo sapiens. 22 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo24/100

Dynamic changes of DNA methylome and hydroxymethylome during neural differentiation of hES cells (Methylation BeadChip)

GEO Series GSE38216. Homo sapiens. 12 samples. Type: Methylation profiling by array.

openGEO-OpenNov 2013View details →
geo24/100

Differential methylation analysis in human whole blood DNA from healthy smokers and non-smokers

GEO Series GSE85210. Homo sapiens. 253 samples. Type: Methylation profiling by genome tiling array.

openGEO-OpenFeb 2017View details →
geo24/100

Genome-wide analysis of differential methylation and gene expression in a testicular cancer cell line

GEO Series GSE15220. Homo sapiens. 13 samples. Type: Expression profiling by array; Methylation profiling by genome tiling array.

openGEO-OpenMar 2009View details →
geo24/100

Methylation profiling of differentially expressed regions between C57BL/6 and BALB/c in bone marrow derived macrophages

GEO Series GSE14463. Mus musculus. 4 samples. Type: Methylation profiling by genome tiling array; Genome variation profiling by genome tiling array.

openGEO-OpenAug 2009View details →
geo24/100

Integrative analysis of methylome and transcriptome in human blood identifies extensive sex and immune cell-specific differentially methylated regions [expression]

GEO Series GSE71115. Homo sapiens. 24 samples. Type: Expression profiling by array.

openGEO-OpenJul 2016View details →
geo24/100

Differential methylation between mouse embyronic stem cell states

GEO Series GSE58396. Mus musculus. 2 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenJul 2014View details →
geo24/100

Integrated detection of both 5-mC and 5-hmC by high-throughput tag sequencing technology highlights methylation reprogramming of bivalent genes during cellular differentiation [HMST-Seq]

GEO Series GSE41069. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenDec 2012View details →
geo24/100

Amyloid protein-mediated differential DNA methylation status regulates gene expression in Alzheimer’s disease model cell line.

GEO Series GSE72538. Homo sapiens. 2 samples. Type: Methylation profiling by array.

openGEO-OpenSep 2015View details →
geo24/100

Differential CpG methylation at Nnat in the early establishment of beta cell heterogeneity

GEO Series GSE249659. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2024View details →
geo24/100

Zfp217 orchestrates m6A mRNA methylation and gene expression to promote adipogenic differentiation

GEO Series GSE119564. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.

openGEO-OpenApr 2019View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record