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zenodo28/100

Figure 2 from: Senanayake IC, Jeewon R, Camporesi E, Hyde KD, Zeng Y-J, Tian S-L, Xie N (2018) Sulcispora supratumida sp. nov. (Phaeosphaeriaceae, Pleosporales) on Anthoxanthum odoratum from Italy. MycoKeys 38: 35-46. https://doi.org/10.3897/mycokeys.38.27729

Figure 2 Sulcisporasupratumida (MFLU 15–0038). a Leaves of Anthoxanthumodoratumb Appearance of ascomata on host surface c Cross section of ascoma d Peridium e Pseudoparaphyses f–i Asci j–nAscosporeso Upper surface of the culture p Lower surface of the culture. Scale bars: 200 µm (b), 50 µm (c), 20 µm (d–i), 10 µm (j–n).

opencc-by-4.0Aug 2018View details →
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Figure 5 from: Norphanphoun C, Raspé O, Jeewon R, Wen T-C, Hyde KD (2018) Morphological and phylogenetic characterisation of novel Cytospora species associated with mangroves. MycoKeys 38: 93-120. https://doi.org/10.3897/mycokeys.38.28011

Figure 5 Cytosporaxylocarpi (MFLU 17-0708, holotype). aXylocarpusgranatumb Branch of XylocarpusgranatumcAscostromata on host substrate d Surface of ascomata e Transverse sections through ascostroma to show distribution of locules f, g Longitudinal sections through ascostroma to show distribution of locules hPeridiumi–l, n Asci m, oAscosporesp Germinating spore q, r Colonies on MEA (q-from above, r-below) s Transverse sections through conidioma to show distribution of locules t Longitudinal sections through conidioma to show distribution of locules u, v Conidiogenous cells with attached conidia w Mature conidia. Scale bars: c = 2000 µm, d–f = 500 µm, g = 200 µm, h = 20 µm, i, p = 10 µm, j–o, u–w = 5 µm, s, t = 400 µm.

opencc-by-4.0Sep 2018View details →
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Figure 3 from: Norphanphoun C, Raspé O, Jeewon R, Wen T-C, Hyde KD (2018) Morphological and phylogenetic characterisation of novel Cytospora species associated with mangroves. MycoKeys 38: 93-120. https://doi.org/10.3897/mycokeys.38.28011

Figure 3 Cytosporalumnitzericola (MFLUCC 17-0508, from culture). a Mangrove collecting site b, cLumnitzeraracemosa in mangroves forest d, e Colonies on MEA after 6 days (left) and 30 days (right) (d-from above, e-from below) f, gConidiomata produced on MEAh, l Transverse sections of conidioma i, j, n Conidiogenous cells with attached conidia k, mConidia. Scale bars: f = 1000 µm, g, h = 500 µm, i, j = 10 µm, k = 5 µm.

opencc-by-4.0Sep 2018View details →
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Figure 2 from: Norphanphoun C, Raspé O, Jeewon R, Wen T-C, Hyde KD (2018) Morphological and phylogenetic characterisation of novel Cytospora species associated with mangroves. MycoKeys 38: 93-120. https://doi.org/10.3897/mycokeys.38.28011

Figure 2 Maximum parsimony phylogenetic tree inferred from ITS1 and ITS2 sequence data. Maximum parsimony and maximum likelihood bootstrap values ≥50%, Bayesian posterior probabilities ≥0.90 (MPBS/MLBS/BIPP) are given at the nodes. The species obtained in this study are in blue font. Ex-type taxa from other studies are in black bold.

opencc-by-4.0Sep 2018View details →
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Figure 1 from: Norphanphoun C, Raspé O, Jeewon R, Wen T-C, Hyde KD (2018) Morphological and phylogenetic characterisation of novel Cytospora species associated with mangroves. MycoKeys 38: 93-120. https://doi.org/10.3897/mycokeys.38.28011

Figure 1 Phylogram generated from maximum parsimony analyses based on analysis of combined ITS, LSU, ACT and RPB2 sequence data. The tree is rooted to Diaportheeres (AFTOL-ID 935). Maximum parsimony and maximum likelihood bootstrap values ≥50%, Bayesian posterior probabilities ≥0.90 (MPBS/MLBS/PP) are given at the nodes. The species obtained in this study are in blue font. Ex-type taxa from other studies are in black bold.

opencc-by-4.0Sep 2018View details →
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Figure 4 from: Norphanphoun C, Raspé O, Jeewon R, Wen T-C, Hyde KD (2018) Morphological and phylogenetic characterisation of novel Cytospora species associated with mangroves. MycoKeys 38: 93-120. https://doi.org/10.3897/mycokeys.38.28011

Figure 4 Cytosporathailandica (MFLU 17-0709, holotype). aXylocarpusmoluccensisb Branch of XylocarpusmoluccensiscAscostromata on host substrate d, e Surface of ascomata f Transverse sections through ascostroma to show distribution of locules g–h Longitudinal sections through ascostroma to show distribution of locules iPeridiumj Ostiolar neck ka–kd, n Asci l, m Apical ring oa–ofAscosporesp Surface of conidioma q Transverse sections through conidioma to show distribution of locules r, s Longitudinal sections through conidioma to show distribution of locules tPeridiumu Ostiolar neck va–vc, w Conidiogenous cells with attached conidia x, yConidiaza, zb Colonies on MEA (za-from above, zb-from below). Scale bars: d = 1000 µm, e–g = 400 µm, h, j, p–s = 200 µm, i, u = 100 µm, ka–kd, n = 10 µm, l, m = 2 µm, oa–of, va–vc, w = 5 µm, t = 50 µm, x, y = 4 µm.

opencc-by-4.0Sep 2018View details →
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Figure 3 from: He M-Q, Chuankid B, Hyde KD, Cheewangkoon R, Zhao R-L (2018) A new section and species of Agaricus subgenus Pseudochitonia from Thailand. MycoKeys 40: 53-67. https://doi.org/10.3897/mycokeys.40.26918

Figure 3 Morphology of AgaricusangusticystidiatusA, B basidiomes C, D basidiospores E basidia and cheilocystidia.

opencc-by-4.0Sep 2018View details →
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Figure 2 from: He M-Q, Chuankid B, Hyde KD, Cheewangkoon R, Zhao R-L (2018) A new section and species of Agaricus subgenus Pseudochitonia from Thailand. MycoKeys 40: 53-67. https://doi.org/10.3897/mycokeys.40.26918

Figure 2 Maximium Clade Credibility tree of genus Agaricus based on ITS, LSU and tef1-α gene sequences with the outgroup Heinemannomyces sp. Posterior probability values equal or above 0.9 are annotated at the internodes. The 95% highest posterior density of divergence time estimation are marked by horizontal bars.

opencc-by-4.0Sep 2018View details →
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Figure 1 from: He M-Q, Chuankid B, Hyde KD, Cheewangkoon R, Zhao R-L (2018) A new section and species of Agaricus subgenus Pseudochitonia from Thailand. MycoKeys 40: 53-67. https://doi.org/10.3897/mycokeys.40.26918

Figure 1 Phylogenetic tree of AgaricussubgenusPseudochitonia generated from Bayesian analysis of ITS sequences, rooted with A.campestris. Bayesian posterior probability (PP) values ≥ 0.9 or Bootstrap support (BS) values ≥ 50% are indicated at the internodes (PP/BS). The branches in bold mean the related PP > 0.95, "T" refers to sequences from type specimen.

opencc-by-4.0Sep 2018View details →
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Figure 2 from: Huang S-K, Jeewon R, Hyde KD, Bhat DJ, Chomnunti P, Wen T-C (2018) Beta-tubulin and Actin gene phylogeny supports Phaeoacremonium ovale as a new species from freshwater habitats in China. MycoKeys 41: 1-15. https://doi.org/10.3897/mycokeys.41.27536

Figure 2 Phaeoacremoniumovale (HKAS99550, holotype). a Substrate b, c Ascoma on host d Squashed neck e Ascoma in vertical section fPeridiumg Asci surrounded by paraphyses h Asci i Septate paraphyses j–m Asci with ascospores n Germinating ascospores. Note: Fig. i stained in Congo red reagent, fig l stained in Melzer's reagent. Scale bars: 500 µm (c); 200 µm (d); 100 µm (e); 50 µm (f, i); 30 µm (n); 20 µm (g–h); 10 µm (j–m)

opencc-by-4.0Oct 2018View details →
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Figure 1 from: Huang S-K, Jeewon R, Hyde KD, Bhat DJ, Chomnunti P, Wen T-C (2018) Beta-tubulin and Actin gene phylogeny supports Phaeoacremonium ovale as a new species from freshwater habitats in China. MycoKeys 41: 1-15. https://doi.org/10.3897/mycokeys.41.27536

Figure 1 Maximum likelihood phylogenetic tree generated from analysis of a combined TUB and ACT sequences dataset for 98 taxa of Togniniaceae. Pleurostomarichardsiae (CBS 270.33) and Wuestineaiamolokaiensis (CBS 114877) are the outgroup taxa. ML support values greater than 70% (BSML, left) and Bayesian posterior probabilities greater than 0.90 (BYPP, right) are indicated above the nodes. The strain numbers are noted after the species names. Ex-type strains are indicated in bold. Isolates from this study are indicated in red.

opencc-by-4.0Oct 2018View details →
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Figure 3 from: Huang S-K, Jeewon R, Hyde KD, Bhat DJ, Chomnunti P, Wen T-C (2018) Beta-tubulin and Actin gene phylogeny supports Phaeoacremonium ovale as a new species from freshwater habitats in China. MycoKeys 41: 1-15. https://doi.org/10.3897/mycokeys.41.27536

Figure 3 Phaeoacremoniumovale (HKAS99550, holotype). o Germinating ascospores, p 7 weeks of culture plate (above, left/reverse, right), q Mycelium with adelophialides r–t Branched conidiophores u–vConidia. Scale bars: 20 mm (p); 20 µm (o); 10 µm (r, t); 5 µm (q, s, u–v).

opencc-by-4.0Oct 2018View details →
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Figure 8 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 8 Colletotrichumfructicola.A Colony B Conidiomata and ascomata C, D Conidiomata E, F Ascomata G–J Conidiophores L Setae M–Q Asci R–V Ascospores Scale bars: 500 µm (B–D), 20 µm (E, F), 5 µm (G–J), 10 µm (L), 10 µm (M–Q), 5 µm (R–V).

opencc-by-4.0Dec 2018View details →
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Figure 3 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 3 Colletotrichumchiangraiense (holotype). A Colony B Spore germination C Conidiophore D Appressoria E Chlamydospore F Mycelia fusion G Crozier H–N Asci O–R Ascospores. Scale bars: 20 µm (D), 20 µm (G), 5 µm (J–N), 10 µm (O–R).

opencc-by-4.0Dec 2018View details →
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Figure 7 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 7 Colletotrichumcitricola. A Colony B Conidiomata C Fruiting bodies D Fruiting body with setae E Setae F Ascomata G–L Conidiophores M, N Conidia O Chlamydospore P–U Young asci V–X Ascospores. Scale bars: 500 µm (B), 200 µm (C), 10 µm (E–F), 5 µm (G), 5 µm (M–N), 10 µm (Q–U), 5 µm (V–X).

opencc-by-4.0Dec 2018View details →
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Figure 2 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 2 Colletotrichumcariniferi (holotype). A Colony B Conidiomata C, I–J Appressoria D–H Conidiophores K–M Conidia. Scale bars: 100 µm (B), 5 µm (C–D), 10 µm (E–H), 5 µm (I–M).

opencc-by-4.0Dec 2018View details →
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Figure 5 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 5 Colletotrichumdoitungense (holotype). A Colony B Fruiting body C–D Ascomata E–J Conidiophores K–L Conidia M Spore germination N–V Asci W–a Ascospores. Scale bars: 100 µm (B), 20 µm (C–D), 5 µm (E–M), 10 µm (N–V), 5 µm (W–a).

opencc-by-4.0Dec 2018View details →
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Figure 6 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 6 Colletotrichumparallelophorum (holotype). A Colony B, C Fruiting body D Setae E–F Ascomata G, J–L Conidiophores I Appressoria M–P Conidia Q–T Asci U–V Ascospore. Scale bars: 50 µm (B), 500 µm (C), 20 µm (D), 100 µm (E), 50 µm (F), 20 µm (G), 10 µm (H–L), 5 µm (M, N), 10 µm (O–V).

opencc-by-4.0Dec 2018View details →
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Figure 4 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 4 Colletotrichumwatphraense (holotype). A Colony B Fruiting body C–J Conidiophores K–N Conidia. Scale bars: 200 µm (B), 5 µm (C–N).

opencc-by-4.0Dec 2018View details →
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Figure 1 from: Ma X, Nontachaiyapoom S, Jayawardena RS, Hyde KD, Gentekaki E, Zhou S, Qian Y, Wen T, Kang J (2018) Endophytic Colletotrichum species from Dendrobium spp. in China and Northern Thailand. MycoKeys 43: 23-57. https://doi.org/10.3897/mycokeys.43.25081

Figure 1 Maximum likelihood (ML) tree of Colletotrichum inferred from 134 taxa and 1646 sites from a concatenated dataset containing ITS, GAPDH, ACT and ß-tubulin sequence data. Values at nodes indicate bootstrap percentages (BP) for ML, Bayesian posterior probabilities (PP) and BP for maximum parsimony (MP) in this order. Only BP over 50%, PP over 0.50 and MP over 50 are shown. Dashes correspond to lower than the above-mentioned values. The isolated fungal endophytes in this study are shown in green bold text. Scale bar corresponds to 0.08 substitutions per site. "*" indicates the new species.

opencc-by-4.0Dec 2018View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record