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233
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ShareScore release 0.9.0
Dataset results
233 results for “Long-read”
Aligned Long-Read Murine Samples: Part 10
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 9
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 8
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 4
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 3
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 1
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 7
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 6
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 2
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Aligned Long-Read Murine Samples: Part 5
<p>Accession numbers can be queried via the European Nucleotide Archive for metadata information: https://www.ebi.ac.uk/ena </p> <p>Samples analyzed via the original version of L-RAPiT: </p> <p>Nelson, T.M.; Ghosh, S.; Postler, T.S. L-RAPiT: A Cloud-Based Computing Pipeline for the Analysis of Long-Read RNA Sequencing Data. <em>Int. J. Mol. Sci.</em> <strong>2022</strong>, <em>23</em>, 15851. https://doi.org/10.3390/ijms232415851</p>
Long-read Genome Sequencing for the Molecular Diagnosis of Dystonia
ClinicalTrials.gov study NCT06999096. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Mitochondrial Diseases - Long-read Genome and Transcriptome Sequencing in Cases Unresolved After Short-read Genomics
ClinicalTrials.gov study NCT03962452. IPD Sharing: NO. Countries: 1. Publications: 0.
Implementation of Long-read Sequencing for the Diagnosis of Rare Diseases.
ClinicalTrials.gov study NCT07400913. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Initiative for Clinical Long-read Sequencing
ClinicalTrials.gov study NCT06060184. IPD Sharing: YES. Countries: 1. Publications: 0.
Developmental and Epileptic Encephalopathies Diagnosed Via Long-read Genome Sequencing
ClinicalTrials.gov study NCT07396883. IPD Sharing: NO. Countries: 1. Publications: 0.
The Benefits of Long-read High-throughput Genomic Sequencing for the Causal Diagnosis of Cerebellar Ataxias
ClinicalTrials.gov study NCT06467175. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Accurate long-read transcript discovery and quantification at single-cell resolution with Isosceles [RNA-seq]
GEO Series GSE248114. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [in_situ_STAMP - Long-Read]"
GEO Series GSE240325. Homo sapiens. 2 samples. Type: Other.
COVID-19 vaccination is associated with attenuation of inflammatory responses during breakthrough disease [long-read RNA-Seq]
GEO Series GSE228840. Homo sapiens. 39 samples. Type: Expression profiling by high throughput sequencing.
An EGFR Co-amplified Long Noncoding RNA HELDR Promotes Glioblastoma Malignancy through KAT7-driven gene programs [Long-reads, GBM6]
GEO Series GSE286320. Homo sapiens. 1 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.