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245 results for “Rust”
Figure 3 from: Mounce R, Murray-Rust P, Wills M (2017) A machine-compiled microbial supertree from figure-mining thousands of papers. Research Ideas and Outcomes 3: e13589. https://doi.org/10.3897/rio.3.e13589
Figure 3 - Number of leaves (terminal taxa) in each of 1614 source tree images (blue) and number of leaves recovered-from each image (orange). The modal number of taxa recovered per image was 12, the median was 13, and the mean was 13.96. The modal number of taxa not recovered from the trees was 2, the median was 5 and the mean was 7.15. The image mining process is lossy since most output tree files did not recover all of the taxa from the source image.
Figure 2 from: Mounce R, Murray-Rust P, Wills M (2017) A machine-compiled microbial supertree from figure-mining thousands of papers. Research Ideas and Outcomes 3: e13589. https://doi.org/10.3897/rio.3.e13589
Figure 2 - A typical source input tree raster image (figure 1 from Park et al. 2008). Note the low resolution image quality. As this computer-generated ilustration follows predefined rules and conventions for the visual display of phylogenetic trees, we do not believe that it qualifies as a copyrightable work in itself (see Egloff et al. 2017 for more).
Figure 7 from: Mounce R, Murray-Rust P, Wills M (2017) A machine-compiled microbial supertree from figure-mining thousands of papers. Research Ideas and Outcomes 3: e13589. https://doi.org/10.3897/rio.3.e13589
Figure 7 - Comparison between our supertree (left) and the NCBI Taxonomy reference tree (right): This example section of the supertree corresponds to taxa mostly from Rhodospirillaceae with the exception of rogue taxa indicated with a red asterisk. This section is related to the NCBI taxonomy reference tree on the right, containing those Rhodospirillaceae species leaves included in the supertree analysis (27). Nine taxa out of the 27 Rhodospirillaceae included were reconstructed elsewhere in our supertree (not shown). This is representative of the phylogenetic placement errors found throughout the supertree: individual rogue taxa, as well as misplaced clades of related taxa.
Figure 8 from: Mounce R, Murray-Rust P, Wills M (2017) A machine-compiled microbial supertree from figure-mining thousands of papers. Research Ideas and Outcomes 3: e13589. https://doi.org/10.3897/rio.3.e13589
Figure 8 - A visual exploration of taxon overlap of the 924 source trees used in this supertree analysis using the Supertree Toolkit 2 (Hill and Davis 2014). This demonstrates that there is not connectivity between all of the source trees we used in our supertree analysis.
Figure 2 in Within-plant distribution and rapid assessment of sugarcane rust mite population on sugarcane canopy
Figure 2 Within-plant distribution of sugarcane rust mite population based on direct counting on three sugarcane cultivars (mean ± SEM). The numbers within brackets are the proportions of mite populations within plants. Means across leaves with the same capital letters are not significantly different and means with the same lower letters on a given leaf position are not significantly different (Tukey, P <0.05).
Artifact for Rust for Embedded Systems: Current State and Open Problems
Open the record for dataset details and reuse information.
Figure 2 from: Ebinghaus M, Begerow D (2018) Ravenelia piepenbringiae and Ravenelia hernandezii, two new rust species on Senegalia (Fabaceae, Mimosoideae) from Panama and Costa Rica. MycoKeys 41: 51-63. https://doi.org/10.3897/mycokeys.41.27694
Figure 2 Raveneliapiepenbringiae. A Telia in chlorotic spots associated with infection of SenegaliahayesiiB, C sori showing uredinio- and teliospores and teliospores, respectively D SEM image of a telium E SEM view of a teliospore F, I LM images of teliospores G SEM image of urediniospores showing equatorially arranged germ pores H drawings of urediniospores. Scale bars: 3 mm (A); 0.1 mm (B); 0.2 mm (C); 40 mm(D); 10 mm (E); 20 mm(F); 5 mm(G); 10 mm(H); 20 mm(I).
Figure 1 from: Ebinghaus M, Begerow D (2018) Ravenelia piepenbringiae and Ravenelia hernandezii, two new rust species on Senegalia (Fabaceae, Mimosoideae) from Panama and Costa Rica. MycoKeys 41: 51-63. https://doi.org/10.3897/mycokeys.41.27694
Figure 1 Maximum likelihood reconstruction of Ravenelia spp. based on 28S rDNA sequence data. Bootstrap values are shown above branches based on 1000 replicates (MLBS and MPBS, respectively), values below 75 are not shown. Names of species collected on neotropical Senegalia hosts including R.piepenbringiae and R.hernandezii are highlighted (bold, red box). For paleotropically distributed species of Senegalia rusts, see black box.
Figure 3 from: Ebinghaus M, Begerow D (2018) Ravenelia piepenbringiae and Ravenelia hernandezii, two new rust species on Senegalia (Fabaceae, Mimosoideae) from Panama and Costa Rica. MycoKeys 41: 51-63. https://doi.org/10.3897/mycokeys.41.27694
Figure 3 Raveneliahernandezii. A Infected leaflets of S.tenuifoliaB Mixed sori containing urediniospores and teliospores C Teliospore seen in LM D telium seen by SEM E Adaxial view of a teliospore by LM, with arrows indicating the uniseriate cysts F SEM view of spinescent teliospores G LM view of the upper surface H drawing of a urediniospore. Scale Bars: 0.5 mm (A); 0.1 mm (B); 20 mm (C–G); 10 mm (H).
Figure 4 from: Ebinghaus M, Maier W, Wingfield MJ, Begerow D (2018) New host associations and a novel species for the gall-inducing acacia rust genus Ravenelia in South Africa. MycoKeys 43: 1-21. https://doi.org/10.3897/mycokeys.43.25090
Figure 4 Infected host organs and spore images of R.xanthophloeae (A–H), R.natalensis (I), R. evansii (J) and R.macowaniana (K) A Infected individual of V.xanthophloea. Leaves were prematurely shed in comparison with uninfected trees B Telia on leaflets of V.xanthophloeaC SEM of an aeciospore showing scattered germpores D SEM of an urediniospore E Urediniospores seen in LM F SEM view of a teliospore of R.xanthophloeae. The arrows indicate irregularly arranged verrucose ornamentations G Telium of R.xanthophloeae seen in SEM H LM view of a teliospore. The arrow indicates irregularly arranged verrucose ornamentations I Teliospores of R.natalensis with long pedicels J SEM picture of median section of a teliospore of R.evansii. Arrows indicate 2-celled probasidial cells K LM picture of teliospores of R.macowaniana. Scale bars: 1 mm (B), 4 μm (C), 2 μm (D), 20 μm (E), 20 μm (F–H, J–K), 40 μm (I).
Figure 3 from: Ebinghaus M, Maier W, Wingfield MJ, Begerow D (2018) New host associations and a novel species for the gall-inducing acacia rust genus Ravenelia in South Africa. MycoKeys 43: 1-21. https://doi.org/10.3897/mycokeys.43.25090
Figure 3 Radarchart of mean values of the morphological investigations of teliospore characteristics of Raveneliamacowaniana originated from Vachelliakarroo (red), V.natalitia (green) and R.xanthophloeae on V.xanthophloea (blue). Numbers on y-axis represent the respective minimum and maximum values. This radarchart reveals the morphological differences between R.macowaniana and R.xanthophloeae.
Figure 1 from: Ebinghaus M, Maier W, Wingfield MJ, Begerow D (2018) New host associations and a novel species for the gall-inducing acacia rust genus Ravenelia in South Africa. MycoKeys 43: 1-21. https://doi.org/10.3897/mycokeys.43.25090
Figure 1 Phylogenetic reconstruction of Ravenelia species on different Vachellia hosts A Maximum likelihood tree with 1000 bootstrap repeats based on combined nrITS and LSU rDNA sequence data. Bootstrap values below 75 are not shown. Three highly supported groups represent R.evansii, R.macowaniana and R.xanthophloeae sp. nov., respectively. Specimens that originated from formerly unreported host species are highlighted in bold B Parsimony network analysis based on the same dataset as in the ML-analysis. Each line represents one base substitution while small circles represent intermediate but missing sequences. Numbers next to lines indicate the positions of the substitutions in the alignment. Sequences in rectangular boxes were inferred as ancestral by this analysis.
Figure 2 from: Ebinghaus M, Maier W, Wingfield MJ, Begerow D (2018) New host associations and a novel species for the gall-inducing acacia rust genus Ravenelia in South Africa. MycoKeys 43: 1-21. https://doi.org/10.3897/mycokeys.43.25090
Figure 2 Biplots of a principal component analysis (PCA) of six teliospore characteristics of specimens of ARaveneliamacowaniana originating from Vachelliakarroo (red) and V.natalitia (green) and B in comparison with R.xanthophloeae sp. nov. collected from V.xanthophloea (blue) C, D represent R.evansii originating from seven distinct Vachellia species. Each dot represents an individual teliospore for which mean values of multiple measurements of all six defined morphological characteristics were calculated. Each colour represents the host species of the individual rust specimen. In D only spore representatives collected from V.borleae, V.exuvialis and V.davyi were highlighted to gain better visibility.
Supporting code and data for: Exploring the role of asexual multiplication in poplar rust epidemics: impact on diversity and genetic structure
<p>This is the first release of the updated code for the analyses of the related article published in Molecular Ecology.</p>
Figures 11-23 from: Wappler T, Petrulevičius J, Nel A, Rust J (2011) The diversity of Odonata and their endophytic ovipositions from the Upper Oligocene Fossillagerstätte of Rott (Rhineland, Germany). ZooKeys 130: 67-89. https://doi.org/10.3897/zookeys.130.1441
Figures 11-23 - Endophytic oviposition from the Upper Oligocene Fossillagerstätte Rott. Paleoovoidus rectus isp 11–12 On Sideroxylon salicites (HW_Ro_2.8; Sapotaceae). Paleoovoidus arcuatus isp 13 On Sideroxylon salicites (HW_Ro_2.8; Sapotaceae), showing a zigzag pattern 14–15 On Laurophyllum pseudoprinceps (Ro_10982; Lauraceae), entire leaf fossil showing the distributions of scars over the lamina. Lettered lines (a-j) point to individual rows or 'files' of oviposition marks. 16 Trace-fossil specimens GPIBo_Rott_HELL_852 on an indeterminate dicot leaf 17 Enlargement from rectangular template in Figure 16, showing details of an individual scar 18 Entire leaf fossil showing the distributions of scars over the lamina on an indeterminate dicot leaf (Ro_11887). Lettered lines (a-b) point to individual rows of oviposition marks 19 Enlargement from trapezoid template in Figure 18, showing a zigzag pattern 20 Specimen Ro_10355 (an indeterminate dicot leaf) a-c (lettered lines) point to individual rows with a consecutive and parallel pattern 21 Trace-fossil specimens Apocynophyllum sp. (GPIBo_Rott_HELL_854, Apocynaceae). Lettered lines (a-d) point to individual rows of oviposition marks oriented along the secondary venation 22 Enlargement from rectangular template in Figure 21, showing teardrop-shaped oviposition scars. Paleoovoidus bifurcatus isp 23 On Zizyphus zizyphoides (HW_Ro_58.2; Rhamnaceae). Arrows pointing to oviposition scars forming double rows located in an acute angle along to both sides of the veins. Scale bars: stippled bar, 1 cm; slashed bar, 2 mm; dotted bar, 1 mm.
Figures 8-10 from: Wappler T, Petrulevičius J, Nel A, Rust J (2011) The diversity of Odonata and their endophytic ovipositions from the Upper Oligocene Fossillagerstätte of Rott (Rhineland, Germany). ZooKeys 130: 67-89. https://doi.org/10.3897/zookeys.130.1441
Figures 8-10 - Coenagrionidae Kirby, 1890, subfamily and genus undetermined, species A, specimen; coll. Kastenholz 8 Photograph of GPIBo KH-1a 9 Camera lucida drawing GPIBo KH-1a 10 Photograph of GPIBo KH-1b. Abbreviations: Ax – costal braces; N – nodus; Pt – pterostigma; RP – posterior radius; IR – intercalated vein; MA – anterior media; MP – posterior media; CuA – anterior cubitus. Scale bars represent 2 mm.
Figure 7 from: Wappler T, Petrulevičius J, Nel A, Rust J (2011) The diversity of Odonata and their endophytic ovipositions from the Upper Oligocene Fossillagerstätte of Rott (Rhineland, Germany). ZooKeys 130: 67-89. https://doi.org/10.3897/zookeys.130.1441
Figure 7 - Libellulidae species A from the Upper Oligocene Sapropelite- and Diatomite-Layers of Rott.7 Photograph of GPIBo Ro-37a. Abbreviations: N– nodus; RP3/4– posterior radius; MA– anterior media. Scale bar represent 5 mm.
Figures 1-6 from: Wappler T, Petrulevičius J, Nel A, Rust J (2011) The diversity of Odonata and their endophytic ovipositions from the Upper Oligocene Fossillagerstätte of Rott (Rhineland, Germany). ZooKeys 130: 67-89. https://doi.org/10.3897/zookeys.130.1441
Figures 1-6 - Paleotramea cellulosa (Hagen, 1863) from the Upper Oligocene Sapropelite- and Diatomite-Layers of Rott 1 Photograph of GPIBo A-626 2 Photograph of GPIBo A-637a 3 Photograph of GPIBo A-624 4 Photograph of GPIBo A-636b 5 Photograph of GPIBo Ro-2032 6 Photograph of GPIBo A-636 a. Abbreviations: N – nodus; Pt – pterostigma; RP3/4 – posterior radius; MP – posterior media; CuA – anterior cubitus. Scale bars represent 5 mm.
Figure 3 from: Martone M, Murray-Rust P, Molloy J, Arrow T, MacGillivray M, Kittel C, Kasberger S, Steel G, Oppenheim C, Ranganathan A, Tennant J, Udell J (2016) ContentMine/Hypothes.is Proposal. Research Ideas and Outcomes 2: e8424. https://doi.org/10.3897/rio.2.e8424
Figure 3 - Amanuens.is has automatically highlighted facts which can be viewed alongside manual annotations. Annotators can discuss and reply to each other in the browser.
Figure 2 from: Martone M, Murray-Rust P, Molloy J, Arrow T, MacGillivray M, Kittel C, Kasberger S, Steel G, Oppenheim C, Ranganathan A, Tennant J, Udell J (2016) ContentMine/Hypothes.is Proposal. Research Ideas and Outcomes 2: e8424. https://doi.org/10.3897/rio.2.e8424
Figure 2 - A data table showing facts extracted from the 123 papers, including species, human genes, DNA primers and top word frequencies.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.