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185 results for “animal experimentation”
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Rodentia in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Rodentia measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Spermophilus spilosoma in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Spermophilus spilosoma measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Dipodomys merriami in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Dipodomys merriami measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Dipodomys ordii in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Dipodomys ordii measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Dipodomys spectabilis in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Dipodomys spectabilis measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Perognathus flavus in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Perognathus flavus measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Peromyscus leucopus in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Peromyscus leucopus measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Sigmodon hispidus in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Sigmodon hispidus measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Neotoma albigula in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Neotoma albigula measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Neotoma micropus in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Neotoma micropus measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Onychomys arenicola in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Onychomys arenicola measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Onychomys leucogaster in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Onychomys leucogaster measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Jornada Basin LTER/Jornada Experimental Range site, station Rodent trapping web in grassland vegetation zone, study of animal abundance of Chaetodipus penicillatus in units of numberPer3pt14HectareTrappingWeb on a yearly timescale
The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Jornada Basin LTER/Jornada Experimental Range (JRN) contains animal abundance of Chaetodipus penicillatus measurements in numberPer3pt14HectareTrappingWeb units and were aggregated to a yearly timescale.
Species-specific effects of thermal stress on the expression of genetic variation across a diverse group of plant and animal taxa under experimental conditions
<p>Assessing the genetic adaptive potential of populations and species is essential for better understanding evolutionary processes. However, the expression of genetic variation may depend on environmental conditions, which may speed up or slow down evolutionary responses. Thus, the same selection pressure may lead to different responses. Against this background, we here investigate the effects of thermal stress on genetic variation, mainly under controlled laboratory conditions. We estimated additive genetic variance (<i>V<sub>A</sub></i>), narrow-sense heritability (<i>h</i><sup>2</sup>), and the coefficient of genetic variation (<i>CV<sub>A</sub></i>) under both benign control and stressful thermal conditions. We included six species spanning a diverse range of plant and animal taxa and a total of 25 morphological and life-history traits. Our results show that (1) thermal stress reduced fitness components, (2) the majority of traits showed significant genetic variation, and that (3) thermal stress affected the expression of genetic variation (<i>V<sub>A</sub></i>, <i>h</i><sup>2</sup> or <i>CV<sub>A</sub></i>) in only one third of the cases (25 of 75 analyses, mostly in one clonal species). Moreover, effects were highly species-specific, with genetic variation increasing in 11 and decreasing in 14 cases under stress. Our results hence indicate that thermal stress does not generally affect the expression of genetic variation under laboratory conditions but, nevertheless, increases or decreases genetic variation in specific cases. Consequently, predicting the rate of genetic adaptation might not be generally complicated by environmental variation, but requires a careful case-by-case consideration.</p>
Dataset supporting the manuscript "Establishment of a Newborn Lamb Gut-Loop Model to Evaluate New Methods of Enteric Disease Control and Reduce Experimental Animal Use" (Baillou, Kasal-Hoc et al, Veterinary Sciences, 2021)
<p>These are the data supporting reported results in the publication "Establishment of a Newborn Lamb Gut-Loop Model to Evaluate New Methods of Enteric Disease Control and Reduce Experimental Animal Use" (Baillou, A, Kasal-Hoc N. et al, Veterinary Sciences, 2021). DOI not yet available.</p>
Supp. Info. and Data for Forensic analysis of novel SARS2r-CoV identified in game animal datasets in China shows evolutionary relationship to Pangolin GX CoV clade and apparent genetic experimentation
<p>Supplementary Info. and Data to accompany: Forensic analysis of novel SARS2r-CoV identified in game animal datasets in China shows evolutionary relationship to Pangolin GX CoV clade and apparent genetic experimentation</p> <p>Supp_Info_2.xlsx</p> <p>Supp_Info_3.xlsx</p> <p>Supp. Data:</p> <p>Novel GX_ZC45r-CoV genome: GX_ZC45r-CoV.fa</p> <p>Gap filled GX_ZC45r-CoV genome: GX_ZC45-CoV_ZC45_gap_filled_no_polyA.fa</p> <p>Read alignments to gap filled GX_ZC45r-CoV genome using minimap2: GX_ZC45-CoV_ZC45_gap_filled_no_polyA_minimap2_16_SRA.sam</p> <p> </p>
Species-specific effects of thermal stress on the expression of genetic variation across a diverse group of plant and animal taxa under experimental conditions
Open the record for dataset details and reuse information.
Data from: Increased survival of experimentally evolved antimicrobial peptide-resistant Staphylococcus aureus in an animal host
Antimicrobial peptides (AMPs) have been proposed as new class of antimicrobial drugs, following the increasing prevalence of bacteria resistant to antibiotics. Synthetic AMPs are functional analogues of highly evolutionarily conserved immune effectors in animals and plants, produced in response to microbial infection. Therefore, the proposed therapeutic use of AMPs bears the risk of 'arming the enemy': bacteria that evolve resistance to AMPs may be cross-resistant to immune effectors (AMPs) in their hosts. We used a panel of populations of Staphylococcus aureus that were experimentally selected for resistance to a suite of individual AMPs and antibiotics to investigate the 'arming the enemy' hypothesis. We tested whether the selected strains showed higher survival in an insect model (Tenebrio molitor) and cross-resistance against other antimicrobials in vitro. A population selected for resistance to the antimicrobial peptide iseganan showed increased in vivo survival, but was not more virulent. We suggest that increased survival of AMP-resistant bacteria almost certainly poses problems to immune-compromised hosts.
Data from: Revisiting Brownian motion as a description of animal movement: a comparison to experimental movement data
Characterization of patterns of animal movement is a major challenge in ecology with applications to conservation, biological invasions and pest monitoring. Brownian random walks, and diffusive flux as their mean field counterpart, provide one framework in which to consider this problem. However, it remains subject to debate and controversy. This study presents a test of the diffusion framework using movement data obtained from controlled experiments. Walking beetles (Tenebrio molitor) were released in an open circular arena with a central hole and the number of individuals falling from the arena edges was monitored over time. These boundary counts were compared, using curve fitting, to the predictions of a diffusion model. The diffusion model is solved precisely, without using numerical simulations. We find that the shape of the curves derived from the diffusion model is a close match to those found experimentally. Furthermore, in general, estimates of the total population obtained from the relevant solution of the diffusion equation are in excellent agreement with the experimental population. Estimates of the dispersal rate of individuals depend on how accurately the initial release distribution is incorporated into the model. We therefore show that diffusive flux is a very good approximation to the movement of a population of Tenebrio molitor beetles. As such, we suggest that it is an adequate theoretical/modelling framework for ecological studies that account for insect movement, although it can be context specific. An immediate practical application of this can be found in the interpretation of trap counts, in particular for the purpose of pest monitoring.
Supplementary material 1 from: Conan A, Fleitz J, Garnier L, Le Brishoual M, Handrich Y, Jumeau J (2022) Effectiveness of wire netting fences to prevent animal access to road infrastructures: an experimental study on small mammals and amphibians. In: Santos S, Grilo C, Shilling F, Bhardwaj M, Papp CR (Eds) Linear Infrastructure Networks with Ecological Solutions. Nature Conservation 47: 271-281. https://doi.org/10.3897/natureconservation.47.71472
Supplementary materials and methods
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
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