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Dataset results
186 results for “genome wide association study”
Data from: pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studies
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Genome-wide association study finds multiple loci associated with intraocular pressure in HS rats
GEO Series GSE201236. Rattus norvegicus. 53 samples. Type: Expression profiling by high throughput sequencing.
Cross-cancer genome-wide association study of endometrial cancer and epithelial ovarian cancer identifies genetic risk regions associated with risk of both cancers
GEO Series GSE155328. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-omics co-localization with genome-wide association studies reveals a context-specific genetic mechanism at a childhood onset asthma risk locus [Methylation array]
GEO Series GSE172365. Homo sapiens. 206 samples. Type: Methylation profiling by array.
Genome-wide association studies identify novel genetic loci for epigenetic age acceleration among survivors of childhood cancer [Metadata_SJLIFE1_2138]
GEO Series GSE197674. Homo sapiens. 2138 samples. Type: Methylation profiling by genome tiling array.
Multi-omics co-localization with genome-wide association studies reveals a context-specific genetic mechanism at a childhood onset asthma risk locus
GEO Series GSE172368. Homo sapiens. 396 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by array.
Genome-wide association and epistatic studies in sporadic medullary and juvenile papillary thyroid carcinomas
GEO Series GSE67047. Homo sapiens. 225 samples. Type: SNP genotyping by SNP array; Genome variation profiling by SNP array.
A Genome Wide Association Study Reveals Genetic Predisposition for Bortezomib-Induced Peripheral Neuropathy in Multiple Myeloma by Variation in the PREP1-CBS locus.
GEO Series GSE65777. Homo sapiens. 469 samples. Type: SNP genotyping by SNP array; Genome variation profiling by SNP array.
Bone density loci identified by genome-wide association studies segregate a lineage-specific PU.1-dependent gene regulatory network in osteoclasts [HsMmMicroarray]
GEO Series GSE107295. Homo sapiens; Mus musculus. 8 samples. Type: Expression profiling by array.
Bone density loci identified by genome-wide association studies segregate a lineage-specific PU.1-dependent gene regulatory network in osteoclasts [MoEx-1_0-st array]
GEO Series GSE107296. Mus musculus. 9 samples. Type: Expression profiling by array.
Genome wide association study on neuropathy in multiple myeloma
GEO Series GSE66903. Homo sapiens. 116 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
Genome-wide association studies identify novel genetic loci for epigenetic age acceleration among survivors of childhood cancer
GEO Series GSE197678. Homo sapiens. 2922 samples. Type: Methylation profiling by genome tiling array.
Genome-wide Association Study of Different Types of Diabetes and Construction of Genetic Risk Score
ClinicalTrials.gov study NCT06791330. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Genome-wide association studies reveal susceptibility loci for digital dermatitis in Holstein cattle
GEO Series GSE159157. Bos taurus. 222 samples. Type: Genome variation profiling by SNP array.
Integrative genomic analyses revealed colorectal cancer susceptibility genes in risk loci identified in genome-wide association studies
GEO Series GSE121553. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Integrating a genome-wide association study with a large-scale transcriptome analysis to predict genetic regions influencing the glycemic index and texture in rice
GEO Series GSE123616. Oryza sativa Indica Group. 21 samples. Type: Expression profiling by array.
Boxer dataset for genome-wide association study of modifiers of risk of canine degenerative myelopathy in dogs homozygous for SOD1 mutation
GEO Series GSE80315. Canis lupus familiaris. 25 samples. Type: SNP genotyping by SNP array.
Genome-wide association study and transcriptome analysis discover novel genes for bacterial leaf streak resistance in rice
GEO Series GSE229200. Oryza sativa. 12 samples. Type: Expression profiling by high throughput sequencing.
Neuroblastoma Genome-Wide Association Study
Neuroblastoma is a malignancy of the developing sympathetic nervous system that most commonly affects young children and is often lethal. The etiology of this embryonal cancer is not fully understood. We therefore initiated a genome-wide association study (GWAS) in 2007 focused on neuroblastoma patients identified through the Children's Oncology Group (COG; 238 member institutions). Control patients for this study are children cared for at the Children's Hospital of Philadelphia (CHOP) without a diagnosis or family history of cancer. The study was initially designed to genotype 5,000 neuroblastoma cases and 10,000 controls and is powered to detect common susceptibility variants in Caucasian and African American patients. Whole genome genotyping was performed on multiple versions of Illumina SNP arrays. This version of the study represents the complete set of cases genotyped.
Genome-Wide Association Study of Relapse of Childhood Acute Lymphoblastic Leukemia
Using risk-directed therapy for childhood acute lymphoblastic leukemia (ALL), outcome has improved dramatically in the last 40 years. However, a substantial portion of patients experience relapse, many of whom have no known risk factors. Taking a genome-wide approach, we sought to evaluate the relationships between germline SNP genotypes and the risk of relapse in 2,535 children with newly diagnosed ALL after adjusting for genetic ancestry and treatment regimen. We examine prognostic value of selected SNPs in the context of known relapse risk factors (molecular subtypes, minimal residual disease, age and leukocyte count at diagnosis). Associations of relapse-related SNPs with pharmacokinetic and pharmacodynamics of antileukemic drugs offer plausible mechanism by which they are linked to treatment outcome. Finally, we aim to identify SNPs that are related to both genetic ancestry and relapse which are likely to contribute to racial disparities in ALL survival.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
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