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175
datasets available to search
ShareScore release 0.9.0
Dataset results
175 results for “sequence alignments”
Tree and sequence alignment used for diet reconstruction of Laurasiatheria
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Data from: Fully automated sequence alignment methods are comparable to, and much faster than, traditional methods in large data sets: an example with hepatitis B virus
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Sequence alignments for ITS, rpl16, and trnL-trnF
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HPV16 alignment using RNA sequencing data in head and neck quamous cell carcinoma (HNSCC)
GEO Series GSE160008. Homo sapiens; Human papillomavirus 16. 4 samples. Type: Expression profiling by high throughput sequencing.
LiBis: An ultrasensitive alignment method for low-input bisulfite sequencing
GEO Series GSE147454. Homo sapiens. 4 samples. Type: Methylation profiling by high throughput sequencing.
Genome in a Bottle Direct-RNA Sequencing: GM24631 Calibration-Strand Aligned Reads
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Alignment Efficiency of Two Thermal Activated Orthodontic Archwire Sequences
ClinicalTrials.gov study NCT02415673. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Direct RNA sequencing and signal alignment reveal RNA structure ensembles in a eukaryotic cell
GEO Series GSE303560. Candida albicans SC5314. 20 samples. Type: Expression profiling by high throughput sequencing.
Direct RNA sequencing and signal alignment reveal RNA structure ensembles in a eukaryotic cell [RNA004]
GEO Series GSE304703. synthetic construct. 4 samples. Type: Other.
Direct RNA sequencing and signal alignment reveal RNA structure ensembles in a eukaryotic cell [nanopore_DRS]
GEO Series GSE304702. Candida albicans; synthetic construct. 35 samples. Type: Other.
Direct RNA sequencing and signal alignment reveal RNA structure ensembles in a eukaryotic cell
GEO Series GSE309111. synthetic construct. 8 samples. Type: Other.
Candidate human enhancer multiple sequence alignments
<p>ENCODE SCREEN V3 Proximal and Distal Enhancers with homologs.</p>
Alignments for ITS and FRO regions - Single cell sequencing dark fungi
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Multiple sequence alignments of Treponema pallidum complete genomes using three different references for mapping NGS reads
<p>Each file corresponds to the multiple sequence alignment of 75 complete Treponema pallidum genome sequences using the genomes of strains Nichols, SS14, and CDC-2 as references for mapping. This is supplemental data to the manuscript "Evolutionary processes in the emergence and recent spread of <em>Treponema pallidum</em>, the causative agent of syphilis" by Marta Pla-Díaz, Leonor Sánchez-Busó, Lorenzo Giacani, David Šmajs, Philipp P. Bosshard, Homayoun C. Bagheri, Verena J. Schuenemann, Kay Nieselt, Natasha Arora and Fernando González-Candelas</p>
Multiple sequence alignment of CYP450-PF00067 family
<p>A MSA of all the CYP450 family members (pfam identifier PF00067; 1635 sequences as per UniProt at 25th November 2021)</p>
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.