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386
datasets available to search
ShareScore release 0.9.0
Dataset results
386 results for “transposons”
Heat shock response and transposon control in plant shoot stem cells [RNA-seq]
GEO Series GSE223914. Arabidopsis thaliana. 128 samples. Type: Expression profiling by high throughput sequencing.
De novo piRNA cluster formation in the Drosophila germline triggered by transgenes containing a transcribed transposon fragment
GEO Series GSE41780. Drosophila melanogaster. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Pervasive transcription and endosiRNAs restrain transposons during global demethylation in embryonic stem cells [smallRNA-Seq 2]
GEO Series GSE102447. Mus musculus. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Mutating DDM1 in Physcomitrella patens disrupts DNA methylation with a minute effect on transposon regulation and development [RNA-seq]
GEO Series GSE198691. Physcomitrium patens. 6 samples. Type: Expression profiling by high throughput sequencing.
Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis
GEO Series GSE260822. Arabidopsis thaliana. 40 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Transposon mutagenesis of the Zika virus genome highlights regions essential for RNA replication and restricted for immune evasion
GEO Series GSE92546. Zika virus. 10 samples. Type: Expression profiling by high throughput sequencing.
The de novo DNA methyltransferase DNMT3C protects male fertility from transposon activity
GEO Series GSE84141. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
An epigenetic switch ensures transposon repression upon acute loss of DNA methylation in ES cells (RNA-Seq)
GEO Series GSE71591. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells [ChIP-Seq]
GEO Series GSE89694. Mus musculus. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
RNA-seq for Col-0 WT, ddm1(-/-) and Col-0 X ddm1 (F1) to evaluate transposon expression in F1 Col-0Xddm1 and ddm1
GEO Series GSE150435. Arabidopsis thaliana. 9 samples. Type: Expression profiling by high throughput sequencing.
Targeted site integration in plants using a transposon system
GEO Series GSE227105. Arabidopsis thaliana; Glycine max. 19 samples. Type: Other.
A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells
GEO Series GSE89698. Mus musculus. 189 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Chromosomal Architecture of Arabidopsis and its Implication in Transposon Intergration
GEO Series GSE55960. Arabidopsis thaliana. 3 samples. Type: Other.
Loss of Karma transposon methylation underlies oil palm somaclonal mantling
GEO Series GSE68410. Elaeis guineensis. 98 samples. Type: Methylation profiling by genome tiling array.
Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis (ChIP-Seq)
GEO Series GSE242285. Mycobacterium tuberculosis H37Rv. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Targeted transposon screening in bacteria by CRISPR/Cas12k-guided transposase
GEO Series GSE164797. Pseudomonas aeruginosa PAO1. 10 samples. Type: Other.
Specific genomic features underlie the co-option of SVA transposons as cis-regulatory elements in the human genome
GEO Series GSE192951. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Transposon-derived piRNA production in pre-natal and post-natal stages, in Dnmt3L and Miwi2 mutant tetses [small RNA-seq]
GEO Series GSE57746. Mus musculus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Bombyx Vasa sequesters transposon mRNAs in nuage via phase separation requiring RNA binding and self-association [RNA-Seq]
GEO Series GSE213915. Bombyx mori. 4 samples. Type: Expression profiling by high throughput sequencing.
UAP56 couples piRNA clusters to the perinuclear transposon silencing machinery [tiling array]
GEO Series GSE35636. Drosophila melanogaster. 6 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.