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2,620 results for “Molecular Phylogeny”
FIGURE 9 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 9. Distribution map showing collecting localities of examined specimens of Gymnocorymbus bondi (white circles), G. flaviolimai (red circles), G. ternetzi (blue circles) and G. thayeri (yellow circles). White lines represent country boundaries.
FIGURE 6 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 6. Graphical representation of the differences in the pattern of the humeral mark pigmentation in (a) Gymnocorymbus ternetzi and (b) G. bondi and G. thayeri.
FIGURE 11. Gymnocorymbus ternetzi. a in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 11. Gymnocorymbus ternetzi. a) Lectotype of Tetragonopterus ternetzi, BMNH 1885.5.17.163, 42.0 mm SL, Descalvados, Mato Grosso, Rio Paraguay, Brazil, photo by Sandra J. Raredon; b) Gymnocorymbus ternetzi, LBP 3762, 38.2 mm SL, Aquidauana, Mato Grosso do Sul, Rio Paraguay, Brazil.
FIGURE 5 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 5. Second pair of uroneurals. Absent in (a) Gymnocorymbus thayeri, MZUSP 6280, 40.3 mm SL, and present in (b) G. bondi, NRM 41441, 45.6 mm SL. Blue represents residual notochord.
FIGURE 1 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 1. Phylogenetic relationships of the Characidae with a broad sampling of Gymnocorymbus obtained by a ML partitioned analyses of a concatenated characiform matrix. Clades 52, 54 and 55 correspond to prior molecular hypothesis (Oliveira et al. 2011). Asterisks represent bootstrap support ≥80%.
FIGURE 4 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 4. Left side of body of (a) Gymnocorymbus thayeri, MZUSP 6280, 38.9 mm SL showing three posteriormost pleural ribs (yellow numbers) decreasing gradually in size; and (b) Poptella compressa, MCP 25629, 42.7 mm SL showing only two posteriormost pleural ribs (yellow numbers) decreasing gradually in length.
FIGURE 3 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 3. Schematic representation of the anal fin with red arrows indicating the proximal end of the lepidotrichia of the anal fin rays overlapping the ventral end of the proximal radials of the pterygiophores in (a) Gymnocorymbus ternetzi, LIRP 5650, 40.6 mm SL; and the lack of such overlap in (b) Poptella paraguayensis, LIRP 4565, 54.6 mm SL. AFR=anal fin ray; DR=distal radial of the anal fin pterygiophores; MR=medial radial of the anal fin pterygiophores; PR=proximal radial of the anal fin pterygiophores.
FIGURE 13. Gymnocorymbus flaviolimai, INPA 47805 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 13. Gymnocorymbus flaviolimai, INPA 47805, holotype, 48.7 mm SL, Rio Guaporé, Rio Madeira, Costa Marques, Rondônia, Brazil.
FIGURE 12. Gymnocorymbus thayeri. a in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 12. Gymnocorymbus thayeri. a) Lectotype of Gymnocorymbus thayeri, MCZ 89967, 39.9 mm SL, Tefé, Rio Solimões, Rio Amazonas basin, Brazil; b) Specimen of G. thayeri, LBP 9163, 56.4 mm SL, Rio Amazonas, near Iquitos, Peru; c) Specimen of G. thayeri, ANSP 130539, 46.2 mm SL, Río Napo, Rio Amazonas basin, Ecuador; d) Specimen of G. thayeri, MZUSP 93375, 80.9 mm SL, Río Tiquié, upper Rio Negro, Brazil. Photo (a) by Museum of Comparative Zoology, Harvard University.
FIGURE 7 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 7. Representation of the posterior view of the premaxillar showing (a) pentacuspidate to heptacuspidate teeth of Gymnocorymbus thayeri, MZUSP 6280, 40.3 mm SL; and (b) tricuspidate teeth of G. ternetzi, MZUSP 18720, 39.4 mm SL.
FIGURE 8 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 8. Anterior view of a premaxillary tooth of (a) Gymnocorymbus flaviolimai, INPA 11098, 46.7 mm SL, relatively smaller, pentacuspidate tooth; (b) G. ternetzi, LIRP 367, 37.7 mm SL, tricuspidate tooth; and (c) G. thayeri, LBP 17756, 40.2 mm SL, relatively larger, pentacuspidate tooth. Scale bar = 0.25 mm.
FIGURE 2 in Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae)
FIGURE 2. Interspecific relationships within Gymnocorymbus obtained by a Bayesian analysis of the reduced dataset. Numbers on branches represent the posterior probabilities for that split obtained in Bayesian analysis.
FIGURE 15 in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 15. Audiospectrogram and oscillogram of three advertisement calls (part of a longer call series) of Cophyla noromalalae sp. nov. from paratype ZSM 3273/2012, recorded around the entrance of Montagne d'Ambre National Park on 10 December 2012, ca. 20˚C, number of recording DR90. The sounds above 2500 Hz represent other frogs or insects.
FIGURE 14 in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 14. Specimens of Cophyla noromalalae sp. nov. in life: (a) male holotype, ZSM 3250/2012; (b) male observed calling, ZSM 3273/2012; (c) male paratype, UADBA-A 60236; (d) paratype specimen, ZSM 2070/2007.
FIGURE 9 in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 9. Images of the ventral side of the skull, showing difference in shape and extension of posterior vomer (post-choanal portion of vomer; coloured purple) and its dentigerous part (vomerine teeth) in species of Cophyla and Platypelis, based on micro-CT scans (all scale bars 1 mm): (a) C. maharipeo sp. nov., ZSM 3252/2012 from Joffreville near Montagne d'Ambre National Park; (a1) undivided posterior vomer, probably with weakly expressed vomerine teeth (poorly recognizable) of C. maharipeo sp. nov., ZSM 3252/2012; (b) C. noromalalae sp. nov., ZSM 3273/2012 from the entrance of Montagne d'Ambre National Park; (b1) undivided posterior vomer with absence of or rudimentary vomerine teeth (not recognizable) of C. noromalalae sp. nov., ZSM 3273/2012; (c) C. puellarum sp. nov., UADBA-A 60237 from Point de Vue du Grand Moulin; (c1) undivided posterior vomer with well-developed vomerine teeth (clearly recognizable) of C. puellarum sp. nov., UADBA-A 60237; (d) P. pollicaris, NSH 2419, from Ranomafana National Park; (d1) posterior vomer divided, overlapping with neopalatines, and bearing vomerine teeth in P. pollicaris, NSH 2419; (e) P. cf. barbouri, NSH 2587, from Manombo Special Reserve; (e1) neopalatine of P. cf. barbouri, NSH 2587, posterior vomer not clearly recognizable, possibly reduced or not ossified.
FIGURE 8 in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 8. Skull and shoulder girdle in ventral view of: (a) Cophyla puellarum sp. nov., UADBA-A 60237 and (b) Platypelis pollicaris (NSH 2419) (all scale bars 1 mm); Abbreviations: AVom—Anterior vomer (=Pre-choanal portion of vomer); Cl—Clavicle; Col—Columella; Co—Coracoid; Eo—Exoccipital; Max—Maxilla; Na—Nasal; Npl—Neopalatinum; ParSphparasphenoid; P-Co—Precoracoid; Po—Prootic; PrMax—premaxilla; PVom—Posterior vomer (=Post-choanal portion of vomer; coloured purple); Pt—Pterygoid; Qj—Quadratojugale; S—Scapula; Spheth—Sphenethmoid; S.Sc—Supra-scapula.
FIGURE 7 in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 7. Comparative photographs of the three preserved holotypes (scale bar 5 mm): (a) C. maharipeo sp. nov., ZSM 3251/2012, (b) Cophyla noromalalae sp. nov., ZSM 3250/2012; (c) C. puellarum sp. nov., ZSM 3249/2012.
FIGURE 5 in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 5. Maps of northern Madagascar showing all known Cophyla localities verified by molecular data (or bioacoustic evidence: C. phyllodactyla at Benavony). The left map shows elevation whereas the right map shows remaining primary vegetation from the Madagascar vegetation mapping project (http://www.vegmad.org), with green colours symbolizing humid rainforest and montane forest and orange indicating dry forest.
FIGURE 11 in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 11. Specimens of Cophyla maharipeo sp. nov. alive: (a) male holotype (ZSM 3251/2012); (b) calling male (holotype); (c) paratype specimen (assignment to voucher number not possible); (d) juvenile.
FIGURE 4. Majority-rule consensus tree derived from a in Revision and phylogeny of narrow-mouthed treefrogs (Cophyla) from northern Madagascar: integration of molecular, osteological, and bioacoustic data reveals three new species
FIGURE 4. Majority-rule consensus tree derived from a partitioned Bayesian inference analysis of concatenated DNA sequences of the 12S, 16S, COX1, COB, RAG1, KIAA1239, SACS, and TTN genes (6244 bp), showing relationships among species of the Cophylinae. Numbers at nodes are posterior probabilities (first number; values>0.95 bold) and maximum parsimony bootstrap values in percent (second value;>70% bold). The grey box highlights the included species of the genera Cophyla and Platypelis, which form two highly supported and reciprocally monophyletic groups.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
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