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2,399
datasets available to search
ShareScore release 0.9.0
Dataset results
2,399 results for “fragmenter”
tRNA-seq and YAMAT-seq profiling the expressions of tRNA-derived fragments and tRNAs in plants
GEO Series GSE154165. Sorghum bicolor; Glycine max; Hordeum vulgare; Triticum aestivum; Setaria italica; Zea mays; Arabidopsis thaliana. 13 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Circulating U2 small nuclear RNA fragments as a novel diagnostic biomarker for pancreatic and colorectal adenocarcinoma
GEO Series GSE34052. Homo sapiens. 12 samples. Type: Non-coding RNA profiling by array.
Lysine tRNA fragments and miR-194-5p co-regulate hepatic steatosis via β-Klotho and Perilipin 2 (small RNA I)
GEO Series GSE248317. Mus musculus. 44 samples. Type: Non-coding RNA profiling by high throughput sequencing.
tRNA-derived fragments and microRNAs in the maternal-fetal interface of a mouse maternal-immune-activation autism model
GEO Series GSE139191. Mus musculus. 84 samples. Type: Non-coding RNA profiling by high throughput sequencing.
tRNAArg-derived fragments mediate protein arginylation [tRF]
GEO Series GSE146342. Mus musculus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Post-transcriptional 3’UTR cleavage of mRNA transcripts generates thousands of stable uncapped autonomous RNA fragments
GEO Series GSE84068. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing; Other.
Differentially expressed tRNA-derived fragments in bovine fetuses with assisted reproduction induced congenital overgrowth syndrome
GEO Series GSE213525. Bos indicus x Bos taurus. 17 samples. Type: Expression profiling by high throughput sequencing.
Impact of ribosomal depletion, PCR ramp rate, and fragment length on RNA-seq
GEO Series GSE288460. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
A stress-induced error prone 3’ flap-based Okazaki fragment maturation pathway creates internal tandem duplications for cell survival (RNA-seq)
GEO Series GSE178873. Saccharomyces cerevisiae. 8 samples. Type: Expression profiling by high throughput sequencing.
Transfer RNA fragments replace microRNA regulators of the cholinergic post-stroke immune blockade II
GEO Series GSE158312. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Pseudouridylation of tRNA-derived fragments steers translation control in stem cells [iCLIP]
GEO Series GSE101005. Homo sapiens. 10 samples. Type: Other.
Fragmentation of tRNA in Phytophthora infestans asexual life cycle stages and during host plant infection [host plant infection]
GEO Series GSE63292. Phytophthora infestans. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer
GEO Series GSE230694. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Other.
2’-O-Methyl-guanosine 3-base RNA fragments mediate essential natural TLR7/8 antagonism
GEO Series GSE291606. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
tRForest: a novel random forest-based algorithm for tRNA-derived fragment target prediction
GEO Series GSE189510. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide profiling of short fragment-enriched RNA in HeLa cells subjected to exosome depletion by RNAi
GEO Series GSE63496. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
A stress-induced error prone 3’ flap-based Okazaki fragment maturation pathway creates internal tandem duplications for cell survival (WGS)
GEO Series GSE178875. Saccharomyces cerevisiae. 9 samples. Type: Other.
The Lupus autoantigen La prevents mis-channeling of tRNA fragments into the human microRNA pathway
GEO Series GSE77898. Homo sapiens. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Dysregulation of different classes of tRNA fragments in chronic lymphocytic leukemia
GEO Series GSE138889. Homo sapiens. 28 samples. Type: Non-coding RNA profiling by high throughput sequencing.
A ligation-independent sequencing method reveals tRNA fragments with blocked 3' termini
GEO Series GSE233343. Mus musculus; synthetic construct. 105 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.