Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,620
datasets available to search
ShareScore release 0.9.0
Dataset results
2,620 results for “Molecular Phylogeny”
Figure 4 from: Tan K, Zheng H-L, Dong S-P, Ren M-X (2019) Molecular phylogeny of Hiptage (Malpighiaceae) reveals a new species from Southwest China. PhytoKeys 135: 91-104. https://doi.org/10.3897/phytokeys.135.37011
Figure 4 Distribution map of the new species Hiptage incurvatum and the other 12 species of the genus known in China and nearby regions.
Figure 2 from: Tan K, Zheng H-L, Dong S-P, Ren M-X (2019) Molecular phylogeny of Hiptage (Malpighiaceae) reveals a new species from Southwest China. PhytoKeys 135: 91-104. https://doi.org/10.3897/phytokeys.135.37011
Figure 2 Hiptage incurvatum K.Tan & M.X.Ren, sp. nov. A, B habit C flowering branch D flower in frontal view E flower with petals removed in sideview F flower with petals removed in dorsal view showing two large glands on the dorsal sepals) G flowers in sideview H detached petals I young leaf in adaxial view J young samaras K mature samaras L leaf branch in adaxial view. Photos A–C by M. X. Ren, J, K by H. L. Zheng and D–I, L by K. Tan.
Figure 3 from: Tan K, Zheng H-L, Dong S-P, Ren M-X (2019) Molecular phylogeny of Hiptage (Malpighiaceae) reveals a new species from Southwest China. PhytoKeys 135: 91-104. https://doi.org/10.3897/phytokeys.135.37011
Figure 3 Line drawing of Hiptage incurvatum K.Tan & M.X.Ren, sp. nov. A flowering branches B flower (in sideview) C sepals showing two large glands on the dorsal sepals and small glands on the remaining sepals D samara in dorsal view, showing the curved lateral wings E samara in sideview. Drawings by Ya-Jing Zhang based on K. Tan and M.X. Ren 2019033109 (HUTB).
Figure 1 from: Tan K, Zheng H-L, Dong S-P, Ren M-X (2019) Molecular phylogeny of Hiptage (Malpighiaceae) reveals a new species from Southwest China. PhytoKeys 135: 91-104. https://doi.org/10.3897/phytokeys.135.37011
Figure 1 Molecular phylogeny for 17 species of Hiptage and two Neotropical outgroups based on ITS sequences. Bayesian posterior probability (PP) and MP bootstrap values (BS) are showed above branches as PP/BS (only shown if BS > 50%). H. incurvatum was shown in grey. The red, blue, black clades indicate reflexed petals, erect petals, and unknown, respectively. Inserted photos indicate petal-reflexed flowers (red branches) and petal-plat flowers (blue branches). Black branches represent the unclear mode.
FIG. 5 in Phylogeny of the genus Pinnixa White, 1846 (Crustacea, Brachyura, Pinnotheridae) and allies inferred from mitochondrial and nuclear molecular markers, with generic reassignment of twenty-one species
FIG. 5. — Illustrations of selected type and topotypic materials for Glassella spp., by Smithsonian artists MEH, Charisse Baker, and Jack Schroeder, predating loss of subject specimens: A, G. faxoni (Rathbun, 1918) n. comb., habitus, male paratype, cw 10.1 mm, USNM lot 7639; B, G. faxoni n. comb., left chela external surface, male holotype, cw 11.0 mm, USNM lot 7639; C, G. miamiensis (McDermott, 2014) n. comb., habitus, male, cw 4.7 mm, HBOI uncatalogued specimen from Indian River, Florida; D, G. floridana (Rathtbun, 1918) n. comb., habitus, male holotype, cw 6.7 mm, USNM 6996; E, G. vanderhorsti (Rathbun, 1922) n. comb., habitus, male holotype, cw 6.0 mm, Zoological Museum Amsterdam, now Netherlands Naturalis Biodiversity Center; F, G. vanderhorsti n. comb., gonopodal plate pleonal surface, male holotype, cw 6.0 mm, Amsterdam Museum.
FIG. 3 in Phylogeny of the genus Pinnixa White, 1846 (Crustacea, Brachyura, Pinnotheridae) and allies inferred from mitochondrial and nuclear molecular markers, with generic reassignment of twenty-one species
FIG. 3. — Variation in the chelae in Rathbunixa n. gen.: A-E: left cheliped, dorsal (inner) surface; A-C, R. pearsei (Wass, 1955) n. comb. female, ULLZ 5557 (A); ovigerous female, ULLZ 12188 (B); ovigerous female, ULLZ 14026 (C); D-E, R. sayana (Stimpson, 1960) n. comb.: female, ULLZ 14032 (D); ovigerous female, ULLZ 14029 (E); F, R. occidentalis (Rathbun, 1893) n. comb., left cheliped of male, USNM 17470 (adapted from Rathbun 1918:155, fig. 96); G, R. affinis (Rathbun,1894) n. comb., 1898, right cheliped of female holotype, USNM 21594 (adapted from Rathbun 1918:168, fig. 106). Not to scale.
FIG. 4 in Phylogeny of the genus Pinnixa White, 1846 (Crustacea, Brachyura, Pinnotheridae) and allies inferred from mitochondrial and nuclear molecular markers, with generic reassignment of twenty-one species
FIG. 4. — Reproduced thumbnail sketches of male gonopods and gonopodal plates on lost USNM specimens of Glassella faxoni (Rathbun, 1918) n. comb. (A-C), by R. H. Gore, 1978-1979; G. faxoni n. comb. (D), und Glassella vanderhorsti (Rathbun, 1922) n. comb.; (E, F) by D. L. Felder, 1979-1982. A, left gonopod, pleonal surface, paratype, USNM 23436; B, left gonopod, pleonal surface, holotype, USNM 7639; C, gonopods and gonopodal plate, pleonal surface, holotype USNM 7639; D, gonopods and gonopodal plate, pleonal surface, holotype, USNM 7639; E, gonopodal plate, pleonal surface, topotypic material, USNM 56903; F, gonopods and gonopodal plate, pleonal surface, topotypic material, USNM 56903.
FIG. 1 in Phylogeny of the genus Pinnixa White, 1846 (Crustacea, Brachyura, Pinnotheridae) and allies inferred from mitochondrial and nuclear molecular markers, with generic reassignment of twenty-one species
FIG. 1. — Phylogeny for species of superfamily Pinnotheroidea De Haan, 1833, emphasis on genus Pinnixa White, 1846 s.l. inferred from Randomized Accelerated Maximum Likelihood (RAxML) analysis of a 1445 bp long fragment concatenated from the mitochondrial complex 16S/tRNA-Leu/ NADH1 (776 bp), the mitochondrial 12S rRNA gene (340 bp) and the nuclear gene for the histone 3 subunit (327 bp). Bootstrap support values are shown at the nodes when higher than 50%. Collection number follows the species name to identify samples. For samples in the subfamily Pinnixinae Števčić, 2005, abbreviations indicating geographic origin are defined in "Materials and Methods". Species name combinations as shown are prior to revisions in present paper. Abbreviations as in Material and Methods.
FIG. 2 in Phylogeny of the genus Pinnixa White, 1846 (Crustacea, Brachyura, Pinnotheridae) and allies inferred from mitochondrial and nuclear molecular markers, with generic reassignment of twenty-one species
FIG. 2. — Morphological characters of the type species of Pinnixa White, 1846 s.s., P. cylindrica (Say, 1818), along with those for five molecularly segregated genera formerly treated in Pinnixa s.l.: A-D, Pinnixa cylindrica: A, male dorsal view; B, male cheliped; C, third maxilliped (adapted from Rathbun 1918:160 fig. 99a); D, male pleon; E-G: Glassella costaricana (Wicksten, 1982): E, female holotype dorsal view; F, female cheliped; G, third maxilliped (adapted from Campos & Wicksten 1997: fig. 1, fig. 2c, a, with permission from Allen Press); H, I, Glassella faxoni (Rathbun, 1918) n. comb.: H, third maxilliped; I, male pleon (adapted from Rathbun 1918:133 fig. 77b, a); J-M: Rathbunixa sayana (Stimpson, 1960) n. comb.: J, male dorsal view; K, male cheliped; L, third maxilliped; M, male pleon (L, M adapted from Rathbun 1918:158 fig. 98a, b); N-Q: Sayixa monodactyla (Say, 1818) n. comb., male (ULLZ 8713, Fort Pierce, FL, USA); N, dorsal view; O, cheliped; P, third maxilliped; Q, pleon; R, T, U, Scleroplax granulata Rathbun, 1893; R, female carapace and pereopods 2-5; T, third maxilliped; U, male pleon (R, T adapted from Campos 2006:fig. 1a-c, with permission from Magnolia Press; U, adapted from Rathbun 1918:171 fig. 109a); S, Scleroplax littoralis (Holmes, 1894) n. comb., female and male chelipeds (adapted from Rathbun 1918:146 fig. 89a, b); V-Y, Tubicolixa chaetopterana (Stimpson, 1860) n. comb.: V, male dorsal view; W, female and male chelipeds; X, third maxilliped; Y, male pleon (X, Y, adapted from Rathbun 1918:152 fig. 94a, b).
Fig. 7 in Review of the family Rivulidae (Cyprinodontiformes, Aplocheiloidei) and a molecular and morphological phylogeny of the annual fish genus Austrolebias Costa 1998
Fig. 7. Caudal skeleton of a. Pterolebias longipinnis, b. Papiliolebias bitteri, c. Cynopoecilus melanotaenia, d. Austrolebias wolterstorffi. Scale bar = 1 mm.
Fig. 11 in Review of the family Rivulidae (Cyprinodontiformes, Aplocheiloidei) and a molecular and morphological phylogeny of the annual fish genus Austrolebias Costa 1998
Fig. 11. Maximun parsimony phylogenetic tree of Austrolebias, based on molecular (ribosomal unit 16s, Cytochrome b, RAG1, Glyt) and morphological characters. Colored areas same as Fig. 12.
Fig. 4 in Review of the family Rivulidae (Cyprinodontiformes, Aplocheiloidei) and a molecular and morphological phylogeny of the annual fish genus Austrolebias Costa 1998
Fig. 4. Ventral view of dorsal gill arches of a. Pterolebias longipinnis, b. Cynopoecilus melanotaenia, c. Austrolebias juanlangi; e = epibranchial series, ph = pharyngobranchial series, spe2 = epibranchial subdistal process, upe3 = uncinate process of epibranchial 3. Scale bar = 1 mm.
Fig. 13 in Review of the family Rivulidae (Cyprinodontiformes, Aplocheiloidei) and a molecular and morphological phylogeny of the annual fish genus Austrolebias Costa 1998
Fig. 13. Distribution map of the subgenus Acrolebias according to present phylogenetic analyses. Red dot = A. carvalhoi; Black triangle = A. araucarianus; Black star = A. arachan; White star = A. viarius; Black dot = A. charrua; White dot = A. minuano; Purple triangle = A. reicherti; Light blue triangle = A. nachtigalli; Yellow triangle = A. nigrofasciatus; Red triangle = A. bagual; White triangle = A. adloffi. Map modified from Shuttle Radar Topography Mission (SRTM), Courtesy NASA/JPL-Caltech.
Fig. 12 in Review of the family Rivulidae (Cyprinodontiformes, Aplocheiloidei) and a molecular and morphological phylogeny of the annual fish genus Austrolebias Costa 1998
Fig. 12. Bayesian phylogenetic tree of Austrolebias, based on molecular (ribosomal unit 16s, Cytochrome b, RAG1, Glyt) and morphological characters. Values above branches are posterior probabilities.
Fig. 6 in Review of the family Rivulidae (Cyprinodontiformes, Aplocheiloidei) and a molecular and morphological phylogeny of the annual fish genus Austrolebias Costa 1998
Fig. 6. Dorsal and partial view of ventral gill arches of a. Papiliolebias bitteri, b. Cynopoecilus melanotaenia, c. Ophthalmolebias constanciae, d. Austrolebias juanlangi; b = basibranchial series, bh = basihyal, h = hypobranchial series. Scale bar = 1 mm.
Fig. 9 in Review of the family Rivulidae (Cyprinodontiformes, Aplocheiloidei) and a molecular and morphological phylogeny of the annual fish genus Austrolebias Costa 1998
Fig. 9. Maximun parsinony phylogenetic tree of Austrolebias, based on the molecular markers (ribosomal unit 16s, Citochrome b, RAG1, Glyt). Colored areas same as Fig. 12.
Fig. 1 in Molecular phylogeny and biogeographic history of the Neotropical tribe Glandulocaudini (Characiformes: Characidae: Stevardiinae)
Fig. 1. Abbreviated phylogenetic trees of Stevardiinae (asterisk) obtained in this study based on concatenated dataset (16S+COI+RAG2, 1,829 bp), indicating the placement of the tribe Glandulocaudini (highlighted): a. Bayesian tree, numbers at branches are posterior probabilities and b. Maximum likelihood tree, numbers at branches are bootstrap values, "Clade B" = (Charax stenopterus (Cheirodon ibicuhiensis, Spintherobolus leptoura)).
Fig 3 in Molecular phylogeny and biogeographic history of the Neotropical tribe Glandulocaudini (Characiformes: Characidae: Stevardiinae)
Fig 3. Map showing the updated geographical distribution of Glandulocaudini species analyzed in this study: Glandulocauda caerulea (white triangle), G. melanopleura (blue triangles), Lophiobrycon weitzmani (green crosses), Mimagoniates inequalis (blue circles), M. lateralis (red circles), M. microlepis (black circles), M. rheocharis (yellow circles), and M. sylvicola (white circles). Symbols above the dashed line indicate the northernmost limit of the distribution of Glandulocaudini based on the new records obtained in this study. Some collection points from Menezes et al. (2008: fig. 3)
Supplementary table 1 in Molecular Phylogeny of Coprophanaeus (Megaphanaeus) d'Olsoufieff, 1924 (Coleoptera: Scarabaeidae: Scarabaeinae) and the position of C. bellicosus
Supplementary table 1. Standard PCR Mix conditions
Supplementary material 3 from: Gutiérrez-Gutiérrez C, Teixeira Santos M, Inácio ML, Eisenback JD, Mota M (2020) Description of Longidorus bordonensis sp. nov. from Portugal, with systematics and molecular phylogeny of the genus (Nematoda, Longidoridae). Zoosystematics and Evolution 96(1): 175-193. https://doi.org/10.3897/zse.96.49022
Table S1
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.