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42 results for “Alphaproteobacteria”
Fig. 3 in A report on 24 unrecorded bacterial species of Korea isolated in 2016, belonging to the orders Rhizobiales and Sphingomonadales in the class Alphaproteobacteria
Fig. 3. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their relatives in the Sphingomonadales of the Alphaproteobacteria. Bootstrap values (expressed as percentages of 1000 replications) over 70% are shown at nodes for neighbour-joining, maximum parsimony, and maximum likelihood methods, respectively. Filled circles and open circles indicate that the corresponding nodes were recovered by all treeing methods and by two treeing methods, respectively. Bootstrap values (>70%) are shown at nodes. Bar, 0.02 substitutions per nucleotide position.
Fig. 1 in A report on 24 unrecorded bacterial species of Korea isolated in 2016, belonging to the orders Rhizobiales and Sphingomonadales in the class Alphaproteobacteria
Fig. 1. Transmission electron micrographs of the strains isolated in this study. Strains: 1, HMF4680; 2, Gsoil 1041; 3, YC4-26; 4, 16_S3_ F7; 5, HMF4666; 6, SG2-5; 7, Gsoil 531; 8, KH7a; 9, Gsoil 3034-1; 10, 16_S4_T9; 11, CAU 1113; 12, IMCC25650; 13, IMCC25649; 14, JMS-19; 15, HMF8222; 16, HMF6028; 17, MMS16-CNU530; 18, HMF6507; 19, CAU 1116; 20, EMML2331-1; 21, Gsoil 130; 22, Gsoil 187; 23, CAU 1064; 24, IMCC25648.
Fig. 3 in A report of 29 unrecorded bacterial species in Korea, belonging to the Alphaproteobacteria
Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the order Sphingomonadales in the class Alphaproteobacteria. Bootstrap values (>70%) are shown above nodes for the neighborjoining and below nodes for the maximumlikelihood methods. Filled circles indicate the nodes recovered by the two treeing methods. Bar, 0.01 substitutions per nucleotide position.
Fig. 1 in A report of 29 unrecorded bacterial species in Korea, belonging to the Alphaproteobacteria
Fig. 1. Transmission electron micrographs or scanning electron micrographs of cells of the strains isolated in this study. Strains: 1. CT6-3; 2. CR5-1; 3. WR-M3W; 4. RS3-4_B; 5. CR1-2; 6. MU5-14; 7. CR4-2; 8. IK41; 9. IK20; 10. Gsoil 106; 11. IK38; 12. UKS-12; 13. UKS- 27; 14. mGW21; 15. CR6-9; 16. NUG4-1; 17. CR2-3; 18. HME8658; 19. HME8673; 20. MMH1-3; 21. KYW772; 22. HME8471; 23. WRM10; 24. WR-R2Y; 25. IK06; 26. MA11; 27. ES05-2S-4-MA; 28. HD48; 29. HME8528.
Fig. 2 in A report of 29 unrecorded bacterial species in Korea, belonging to the Alphaproteobacteria
Fig. 2. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the order Rhizobiales in the class Alphaproteobacteria. Bootstrap values (>70%) are shown above nodes for the neighborjoining and below nodes for the maximumlikelihood methods. Filled circles indicate the nodes recovered by the two treeing methods. Bar, 0.02 substitutions per nucleotide position.
Fig. 4 in A report of 29 unrecorded bacterial species in Korea, belonging to the Alphaproteobacteria
Fig. 4. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the order Caulobacterales, Rhodobacterales and Rhodospirillales in the class Alphaproteobacteria. Bootstrap values (>70%) are shown above nodes for the neighborjoining and below nodes for the maximumlikelihood methods. Filled circles indicate the nodes recovered by the two treeing methods. Bar, 0.02 substitutions per nucleotide position.
Fig. 3 in A report of 23 unrecorded bacterial species belonging to the class Alphaproteobacteria
Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationships between the strains isolated in this study and their relatives of the order Rhizobiales, Caulobacterales and Rhodobacterales in the class Alphaproteobacteria. Bootstrap values are greater than 70% are shown in the neighbor-joining tree method. Filled circles indicate the nodes recovered by the maximum-likelihood & maximum-parsimony treeing methods. Bar, 0.02 substitutions per nucleotide position.
Fig. 2 in A report of 23 unrecorded bacterial species belonging to the class Alphaproteobacteria
Fig. 2. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationships between the strains isolated in this study and their relatives of the order Rhodobacterales in the class Alphaproteobacteria. Bootstrap values (>70%) are shown in the neighbor-joining method. Filled circles indicate the nodes recovered by the maximum-likelihood & maximum-parsimony treeing algorithms. Bar, 0.02 substitutions per nucleotide position.
Fig. 1 in A report of 23 unrecorded bacterial species belonging to the class Alphaproteobacteria
Fig. 1. Transmission and scanning electron micrographs of cells of the strains isolated in this study. Strains: 1, Mameliella phaeodactyli FIL 61 (TEM); 2, Yangia pacifica T4-2 (TEM); 3, Paracoccus aminovorans YH6C (TEM); 4, Brevundimonas bullata YHD2 (TEM); 5, Brevundimonas variabilis HMF4573 (TEM); 6, Brevundimonas staleyi HMF4667 (TEM); 7, Maricaulis maris HMF6043 (TEM); 8, Labrenzia alba SFD13 (SEM); 9, Ruegeria atlantica SF30 (SEM); 10, Loktanella rosea ZOD2-5 (SEM); 11, Phaeobacter inhibens EC2 (SEM); 12, Dinoroseobacter shibae GLB36 (SEM); 13, Labrenzia aggregata EC2D15 (SEM); 14, Tropicimonas sediminicola CAU 1140 (TEM); 15, Lutimaribacter saemankumensis CAU 1340 (TEM); 16, Litoreibacter albidus LPB0157 (SEM); 17, Sulfitobacter mediterraneus LPB0162 (TEM); 18, Thalassospira profundimaris IMCC25636 (TEM); 19, Hyphomonas jannaschiana IMCC25644 (TEM); 20, Roseivivax pacificus IMCC25645 (TEM); 21, Thalassospira tepidiphila IMCC25646 (TEM); 22, Paracoccus seriniphilus JHR-13 (TEM); 23, Paracoccus yeei CSC-1 (TEM).
Fig. 3 in A report of 42 unrecorded bacterial species belonging to the Alphaproteobacteria in Korea
Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationships between the strains isolated in this study and their relatives of the order Rhodobacterales in the class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes for the neighbor-joining. Scale bar: 0.01 changes per nucleotide.
Fig. 2 in A report of 42 unrecorded bacterial species belonging to the Alphaproteobacteria in Korea
Fig. 2. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationships between the strains isolated in this study and their relatives of the order Rhizobiales in the class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes for the neighbor-joining. Scale bar: 0.01 changes per nucleotide.
Fig. 4 in A report of 46 unrecorded bacterial species in Korea belonging to the classes Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria
Fig. 4. Neighbor-joining phylogenetic tree, based on 16S rRNA sequences, showing the phylogenetic relationship between strains isolated in this study and their relatives in the orders Burkholderiales, Neisseriales, and Rhodocyclales in the class Betaproteobacteria. Parvularcula oceanus JLT2013T (JPHU01000026) was used as an outgroup. Bootstrap values (>70%) are shown above nodes. Scale bar: 0.02 changes per nucleotide.
Fig. 3 in A report of 46 unrecorded bacterial species in Korea belonging to the classes Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria
Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA sequences, showing the phylogenetic relationship between strains isolated in this study and their relatives in the orders Rhodobacterales, Rhodospirillales, and Sphingomonadales in the class Alphaproteobacteria. Burkholderia dabaoshanensis GIMN1.004T (FJ210816) was used as an outgroup. Bootstrap values (>70%) are shown above nodes. Scale bar: 0.02 changes per nucleotide.
Fig. 1 in A report of 46 unrecorded bacterial species in Korea belonging to the classes Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria
Fig. 1. Transmission electron micrographs or scanning electron micrographs of cells of the strains isolated in this study. The cells were cultured at their optimal growth conditions. Strains: 1, LPB0183; 2, LPB0211; 3, 17J44-22; 4, 17J27-16; 5, KYW1385; 6, BMW10; 7, IMCC34164; 8, IMCC34184; 9, IMCC34185; 10, IMCC34207; 11, IMCC34233; 12, GH4-12; 13, GH1-7; 14, GH1-10; 15, GH2-6; 16, Ibu_S_3; 17, MMS17- GJ036; 18, MMS17-SY214; 19, Gsoil 1028; 20, Gsoil 1111; 21, Gsoil318-1; 22, Gsoil 824; 23, HMF7612; 24, HMF7644; 25, HMF7868; 26, HMF8042; 27, HMF8046; 28, HMF8205; 29, HMF8467; 30, HMF8483; 31, HMF8486; 32, S-1; 33, F-mm3; 34, StC2; 35, BR3409; 36, JMn9; 37, WD42; 38, kw_8; 39, MMS17-GJ039; 40, Gsoil 096; 41, HMF7346; 42, HMF7693; 43, HMF7887; 44, HMF4721; 45, LPB0172; 46, LPB0305.
Fig. 2 in A report of 46 unrecorded bacterial species in Korea belonging to the classes Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria
Fig. 2. Neighbor-joining phylogenetic tree, based on 16S rRNA sequences, showing the phylogenetic relationship between strains isolated in this study and their relatives in the orders Parvularculales and Rhizobiales in the class Alphaproteobacteria. Burkholderia dabaoshanensis GIMN1.004T (FJ210816) was used as an outgroup. Bootstrap values (>70%) are shown above nodes. Scale bar: 0.02 changes per nucleotide.
Fig. 6 in A report of 31 unrecorded bacterial species belonging to the class Alphaproteobacteria in Korea
Fig. 6. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationships between the strains isolated in this study and their relatives of the order Sphingomonadales, class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes. Scale bar: 0.01 changes per nucleotide.
Fig. 4 in A report of 31 unrecorded bacterial species belonging to the class Alphaproteobacteria in Korea
Fig. 4. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationships between the strains isolated in this study and their relatives in the order Rhodobacterales, class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes. Scale bar: 0.01 changes per nucleotide.
Fig. 3 in A report of 31 unrecorded bacterial species belonging to the class Alphaproteobacteria in Korea
Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationship between the strains isolated in this study and their relatives in the order Rhizobiales, class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes. Scale bar: 0.01 changes per nucleotide.
Fig. 2 in A report of 31 unrecorded bacterial species belonging to the class Alphaproteobacteria in Korea
Fig. 2. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationship between the strains isolated in this study and their relatives in the order Caulobacterales, class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes. Scale bar: 0.01 changes per nucleotide.
Fig. 5 in A report of 31 unrecorded bacterial species belonging to the class Alphaproteobacteria in Korea
Fig. 5. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationships between the strains isolated in this study and their relatives of the order Rhodospirillales, class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes. Scale bar: 0.01 changes per nucleotide.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
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International Brain Laboratory public data
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OpenNeuro
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