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6 results for “Branching Process”
Text-fig. 2. Metacheiromys marshii, AMNH 131777, drawing of basicranium in ventral view with isosurface from CT scans of left petrosal inserted (compare with Simpson 1931: fig. 7). Much of the mastoid exposure on the specimen's left side is damaged. Numbers 1 to 4 indicate depressions that based on the right side include a thin layer of entotympanic; 1 to 3 are between petrosal and basioccipital and 4 is petrosal only. The white arrow in the lower left passes through a canal between the petrosal and exoccipital for the auricular branch of the vagus nerve. Abbreviations: abX – grooves and foramina for auricular branch of vagus nerve, as – alisphenoid, astp – alisphenoid tympanic process, bo – basioccipital, bs – basisphenoid, eam – roof of external acoustic meatus, ec – ectotympanic, en – entotympanic, eo – exoccipital, es – epitympanic sinus of squamosal, fm – foramen magnum, fo – foramen ovale, gf – glenoid fossa, hf – hypoglossal foramen, ips – foramen for inferior petrosal sinus, ljf – lateral jugular foramen, me – mastoid exposure of petrosal, mjf – medial jugular foramen, mt – muscular tubercle, mtc – musculotubal canal, oc – occipital condyle, pa – porus acousticus (hidden), pas – parasphenoid, pgp – postglenoid process, pr – promontorium of petrosal, ps – presphenoid, smf – stylomastoid foramen, sof – superior orbital fissure, sq – squamosal, tca – tympanic canaliculus, th – tympanohyal, tm – tubular external acoustic meatus. in Skeletal Anatomy Of The Basicranium And Auditory Region In The Metacheiromyid Palaeanodont Metacheiromys (Mammalia, Pholidotamorpha) Based On High-Resolution Ct Scans
Text-fig. 2. Metacheiromys marshii, AMNH 131777, drawing of basicranium in ventral view with isosurface from CT scans of left petrosal inserted (compare with Simpson 1931: fig. 7). Much of the mastoid exposure on the specimen's left side is damaged. Numbers 1 to 4 indicate depressions that based on the right side include a thin layer of entotympanic; 1 to 3 are between petrosal and basioccipital and 4 is petrosal only. The white arrow in the lower left passes through a canal between the petrosal and exoccipital for the auricular branch of the vagus nerve. Abbreviations: abX – grooves and foramina for auricular branch of vagus nerve, as – alisphenoid, astp – alisphenoid tympanic process, bo – basioccipital, bs – basisphenoid, eam – roof of external acoustic meatus, ec – ectotympanic, en – entotympanic, eo – exoccipital, es – epitympanic sinus of squamosal, fm – foramen magnum, fo – foramen ovale, gf – glenoid fossa, hf – hypoglossal foramen, ips – foramen for inferior petrosal sinus, ljf – lateral jugular foramen, me – mastoid exposure of petrosal, mjf – medial jugular foramen, mt – muscular tubercle, mtc – musculotubal canal, oc – occipital condyle, pa – porus acousticus (hidden), pas – parasphenoid, pgp – postglenoid process, pr – promontorium of petrosal, ps – presphenoid, smf – stylomastoid foramen, sof – superior orbital fissure, sq – squamosal, tca – tympanic canaliculus, th – tympanohyal, tm – tubular external acoustic meatus.
Text-fig. 4. Metacheiromys marshii, AMNH 131777, basicranial isosurface from CT scans in oblique posteroventral view: left petrosal in blue and small piece of left entotympanic in red. The white arrow on the left petrosal passes through a canal traversed by the tympanic nerve. Abbreviations: abX – foramen for auricular branch of vagus nerve, aptt – anteroventral process of tegmen tympani, as – alisphenoid, bo – basioccipital, bs – basisphenoid, ctp – caudal tympanic process, eam – squamosal roof of external acoustic meatus, ec – ectotympanic, en – entotympanic, eo – exoccipital, hf – hypoglossal foramen, ips – foramen for inferior petrosal sinus, ljf – lateral jugular foramen, me – mastoid exposure of petrosal, mjf – medial jugular foramen, mt – muscular tubercle, oc – occipital condyle, pcf – posterior carotid foramen, pp – paroccipital process of petrosal, pr – promontorium of petrosal, ptp – posttympanic process of squamosal, smf – stylomastoid foramen, sq – squamosal, stf – stapedial artery foramen, tca – tympanic canaliculus, th – tympanohyal. in Skeletal Anatomy Of The Basicranium And Auditory Region In The Metacheiromyid Palaeanodont Metacheiromys (Mammalia, Pholidotamorpha) Based On High-Resolution Ct Scans
Text-fig. 4. Metacheiromys marshii, AMNH 131777, basicranial isosurface from CT scans in oblique posteroventral view: left petrosal in blue and small piece of left entotympanic in red. The white arrow on the left petrosal passes through a canal traversed by the tympanic nerve. Abbreviations: abX – foramen for auricular branch of vagus nerve, aptt – anteroventral process of tegmen tympani, as – alisphenoid, bo – basioccipital, bs – basisphenoid, ctp – caudal tympanic process, eam – squamosal roof of external acoustic meatus, ec – ectotympanic, en – entotympanic, eo – exoccipital, hf – hypoglossal foramen, ips – foramen for inferior petrosal sinus, ljf – lateral jugular foramen, me – mastoid exposure of petrosal, mjf – medial jugular foramen, mt – muscular tubercle, oc – occipital condyle, pcf – posterior carotid foramen, pp – paroccipital process of petrosal, pr – promontorium of petrosal, ptp – posttympanic process of squamosal, smf – stylomastoid foramen, sq – squamosal, stf – stapedial artery foramen, tca – tympanic canaliculus, th – tympanohyal.
Parvalbumin expression in oligodendrocyte-like CG4 cells causes a reduction in mitochondrial volume, attenuation in reactive oxygen species production and a decrease in cell processes' length and branching
<p>Forebrain glial cells - ependymal cells and astrocytes -acquire upon injury- a “reactive” phenotype associated with parvalbumin (PV) upregulation. Since free radicals, e.g. reactive oxygen species (ROS) play a role in the pathogenesis of multiple sclerosis, and that PV-upregulation in glial cells is inversely correlated with the level of oxidative stress, we hypothesized that PV-upregulation might also protect oligodendrocytes by decreasing ROS production. Lentiviral transduction techniques allowed for PV overexpression in CG4 oligodendrocyte progenitor cells (OPCs). Depending on the growth medium CG4 cells can be maintained in an OPC-like state, or induced to differentiate into an oligodendrocyte (OLG)-like phenotype. While increased levels of PV had no effect on cell proliferation and invasiveness <em>in vitro</em>, PV decreased the mitochondria volume in CG4 cell bodies, as well as the mitochondrial density in CG4 processes in both OPC-like and OLG-like states. In line with the PV-induced global decrease in mitochondrial volume, elevated PV levels reduced transcript levels of mitochondrial transcription factors involved in mitochondria biogenesis. In differentiated PV-overexpressing CG4 cells with a decreased mitochondrial volume, UV-induced ROS production was lower than in control CG4 cells hinting towards a possible role of PV in counteracting oxidative stress. Unexpectedly, PV also decreased the length of processes in undifferentiated CG4 cells and moreover diminished branching of differentiated CG4 cell processes, strongly correlated with the decreased density of mitochondria in CG4 cell processes. Thus besides conferring a protective role against oxidative stress, PV in a cell autonomous fashion additionally affects process’ growth and branching in CG4 cells.</p>
Data from: Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating
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Data from: Patterns of cranial shape diversification during the phylogenetic branching process of New World monkeys (Primates: Platyrrhini)
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Parvalbumin expression in oligodendrocyte-like CG4 cells causes a reduction in mitochondrial volume, attenuation in reactive oxygen species production and a decrease in cell processes' length and branching
<p>Forebrain glial cells - ependymal cells and astrocytes -acquire upon injury- a “reactive” phenotype associated with parvalbumin (PV) upregulation. Since free radicals, e.g. reactive oxygen species (ROS) play a role in the pathogenesis of multiple sclerosis, and that PV-upregulation in glial cells is inversely correlated with the level of oxidative stress, we hypothesized that PV-upregulation might also protect oligodendrocytes by decreasing ROS production. Lentiviral transduction techniques allowed for PV overexpression in CG4 oligodendrocyte progenitor cells (OPCs). Depending on the growth medium CG4 cells can be maintained in an OPC-like state, or induced to differentiate into an oligodendrocyte (OLG)-like phenotype. While increased levels of PV had no effect on cell proliferation and invasiveness <em>in vitro</em>, PV decreased the mitochondria volume in CG4 cell bodies, as well as the mitochondrial density in CG4 processes in both OPC-like and OLG-like states. In line with the PV-induced global decrease in mitochondrial volume, elevated PV levels reduced transcript levels of mitochondrial transcription factors involved in mitochondria biogenesis. In differentiated PV-overexpressing CG4 cells with a decreased mitochondrial volume, UV-induced ROS production was lower than in control CG4 cells hinting towards a possible role of PV in counteracting oxidative stress. Unexpectedly, PV also decreased the length of processes in undifferentiated CG4 cells and moreover diminished branching of differentiated CG4 cell processes, strongly correlated with the decreased density of mitochondria in CG4 cell processes. Thus besides conferring a protective role against oxidative stress, PV in a cell autonomous fashion additionally affects process’ growth and branching in CG4 cells.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.