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26 results for “Bump”
Data release for "Things that might Go bump in the night: Assessing structure in the binary black hole mass spectrum"
<p>Data release accompanying "Things that might go bump in the night: Assessing structure in the binary black hole mass spectrum"</p> <p>Included are:</p> <ul> <li>500 mock catalogs containing 69 events each, in netCDF4 format (can be found in `with_z_evo_lalprior_69_evs_prod_mock_PE.tar.gz`)</li> <li>A corresponding injection set using O3 sensitivity (`with_z_evo_lalprior_69_evs_prod_injections.h5`)</li> <li>Files containing hyperposterior samples resulting from a Power Law + Spline fit to 100 of the 69-event mock catalogs (`PowerLawSpline_69evs_20knots_2t100_*_result.json`)</li> <li>Files containing hyperposterior samples resulting from a smoothed power law fit to 100 of the 69-event mock catalogs (`Truncated_69evs_*_result.json`)</li> </ul> <p>Code using these files to create all plots in the paper can be found at https://git.ligo.org/amanda.farah/bump-significance</p> <p>Code used to create the mock catalogs can be found at https://git.ligo.org/amanda.farah/mock-PE</p>
BUMP: A Benchmark of Reproducible Breaking Dependency Updates
<p>Bump is a benchmark of breaking dependency updates. A breaking update is defined as a pair of commits for a Java project, which we designate as the pre-commit and the breaking-commit. When we build the project with the pre-commit, compilation and test execution are successful, while the build of the breaking-commit fails. Each breaking-commit is a one-line change in the Maven pom file.</p>
Fig.4 in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
Fig.4 Cells with bulges of strain GeoM*979. a‒d Light microscopy, e‒j scanning electron microscopy; bulges are indicated by arrows. a‒b Different shapes and colours of cells with two bulges on hypotheca. c Vital cell with bulges on epi- and hypotheca. d Necrotic cell with bulges on epi- and hypotheca. e Dorsal view with prominent bulges on hypotheca and possibly smaller bulges on epitheca. f Right lateral view with bulge on hypotheca. g Antapical view with prominent bulge on plate 2′′′′ and smaller bulge on plate 5′′′. h Apical view of a cell with bulge on plate 4′. j Lateral view of a cell with bulges on epiand hypotheca. Plate labelling follows the Kofoidean notation, n′: apical plate; n′′: precingular plate; n′′′: postcingular plate; n′′′′: antapical plate; na: anterior intercalary plate. Scale bar=10 µm
Fig. 3 in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
Fig. 3 Developmental stages of strain GeoM*979. a‒d, f‒g Light microscopy, e scanning electron microscopy. a Two thecate cells enclosed in the parental theca. b Opened theca, ventral view, note that opening starts from the dorsal part of the cell and the lid composed of the plates 3′, 1a‒3a, 3′′‒5′′. c Two connected, swimming cells. d Two connected, immotile cells enclosed in the parental thecae. e Coccoid cell. f Opened theca, dorsal view, note that a ventral lid is removed and the dorsal part still connected to the hypotheca. g Coccoid cell. Plate labelling follows the Kofoidean notation, n′: apical plate; n′′: precingular plate; na: anterior intercalary plate. Scale bar= 10 µm
Fig. 1 in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
Fig. 1 The original material of Peridinium tuberosum. Numbers indicated by Meunier (1919) follow: (23) Ventral view with sulcus extending onto the epitheca (similar to Peridinium cinctum but different from Peridinium gatunense). (24) Dorsal view. (25) Apical view with asymmetrical epithecal plate pattern (similar to P. cinctum). (26) Antapical view. (27) Right lateral view with a slight tilt towards the front. Note the bulges on the posterior end of the cell in 23‒24, 26‒27, which are distinctive traits of P. tuberosum
Fig. 2 in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
Fig. 2 Flagellated cells of strain GeoM*979. a‒f Light microscopy, g‒m scanning electron microscopy, a‒d images taken from the same cell. a Dorsal view. b‒c Chloroplasts (as inferred from autofluorescence) at two different focal planes, note the space occupied by the nucleus. d Cell nucleus with chromosomes (as inferred from astra blue staining). e Ventral view of living cell. f Empty theca (mirrored) portraying cellular plates on the ventral side. g Apical view. h Dorsal view. j Ventral view. k Antapical view. l Right lateral view. m Left lateral view. Plate labelling follows the Kofoidean notation, n′: apical plate; n′′: precingular plate; n′′′; postcingular plate; n′′′′: antapical plate; na: anterior intercalary plate; sp: posterior sulcal plate. Scale bar= 10 µm
◂Fig. 6 A molecular phylogeny of 56 systematically representative Peridiniaceae, including 42 accessions assignable to P. cinctum from various geographic regions. Maximum likelihood tree (– ln = 21,884.93), as inferred from a rRNA nucleotide alignment (1137 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (CZE Czech Republic, E East, GER Germany, HET Heterocapsaceae, N North, PPE Protoperidiniaceae, POL Poland, rbn ribotype n, S South, SWE Sweden, UKR Ukraine, W West) in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
◂Fig. 6 A molecular phylogeny of 56 systematically representative Peridiniaceae, including 42 accessions assignable to P. cinctum from various geographic regions. Maximum likelihood tree (– ln = 21,884.93), as inferred from a rRNA nucleotide alignment (1137 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (CZE Czech Republic, E East, GER Germany, HET Heterocapsaceae, N North, PPE Protoperidiniaceae, POL Poland, rbn ribotype n, S South, SWE Sweden, UKR Ukraine, W West)
Superconducting flip-chip devices using indium microspheres on Au-passivated Nb or NbN as under-bump metallization layer
<p>Data used for figures in "Superconducting flip-chip devices using indium microspheres on Au-passivated Nb or NbN as under bump metallization layer" by A. Paradkar et al. <a href="https://doi.org/10.1063/5.0235266">Appl. Phys. Lett. <strong>126</strong>, 022601 (2025)</a></p>
Parametric bump noise data (from Varnet et al. 2019, Trends in Hearing)
<p>Data collected by Léo Varnet and Chloé Langlet<br> Parametric bump noise experiment (main experiment)</p> <p>See description of the methods and results in 'High-frequency sensorineural hearing loss alters cue-weighting strategies when discriminating stop consonants in noise' (Varnet et al., 2019, Trends in Hearing)</p>
Bump noise ACI data (from Varnet et al. 2019, Trends in Hearing)
<p>Data collected by Leo Varnet<br> Bump noise ACI experiment (pilot experiment)</p> <p>See description of the methods and results in 'High-frequency sensorineural hearing loss alters cue-weighting strategies when discriminating stop consonants in noise' (Varnet et al., 2019, Trends in Hearing)</p>
Inlist and Data Files for "Mixed Mode Asteroseismology of Red Giant Stars Through the Luminosity Bump"
<p>MESA (r12778) and GYRE (version 6.0) inlist files used in the work described in "Mixed Mode Asteroseismology of Red Giant Stars Through the Luminosity Bump". Published in The Astrophysical Journal, Volume 931, Issue 2, id.116 </p> <p>Two subdirectories are provided in the archive:</p> <p>1) The directory called "inlists_and_src" contains different MESA inlist files for different evolutionary period (inlist_pms=pre main sequence to beginning of the red giant phase and inlist_rgb=red giant branch through the RGB luminosity bump) of the stellar model. The four subdirectories refer to the four overshooting prescriptions described in the paper. The different inlist files for the different evolutionary states are called by putting their names in the "inlist" file. Two example gyre (version 6.0) inlists are also included in the "inlists" subdirectory. The inlist titled gyre_pi.in calculates the radial, dipole, and quadrupole pi mode frequencies, while the inlist titled gyre.in calculates the non-pi mode frequencies. </p> <p>A custom diffusion cutoff (see Viani et al. 2018, ApJ, 858, 28) are included in the run_star_extras.f file in the "src" subdirectories. There is also a custom subroutine called "other_adjust_mlt_gradT_fraction_overshoot" which is used to change the temperature gradient within the overshooting region for models incorporating full/penetrative overshoot. The subroutine is activated by setting "x_logical_ctrl(1)" to .true. in the MESA inlists. The amplitude of the full overshooting region is controlled with "x_ctrl(1)"</p> <p>2) The subdirectory named "example_data" include the MESA modelling results used in the paper to produce figure 16, showing the evolution of the gravity mode phase offset through the red giant branch luminosity bump. The GYRE-calculated frequencies are included in the GYRE_OUTPUTS subdirectories. In these models, overshooting from the red giant convective envelope was turned off. </p>
Effects of Hip Bump Manipulation Versus Sham Treatment in Healthy Adults
ClinicalTrials.gov study NCT07025434. IPD Sharing: UNDECIDED. Countries: 1. Publications: 3.
Common molecular targets of a quinolone based bumped ki-nase inhibitor in Neospora caninum and Danio rerio
<p>Supplementary files for paper submitted to IJMS</p>
Magnetar+Bump Modeling of Superluminous Supernovae
<p>These data files are associated with the article <a href="https://ui.adsabs.harvard.edu/abs/2021arXiv210909743H">"Bumpy Declining Light Curves are Common in Hydrogen-poor Superluminous Supernovae."</a> This repository contains four directories, described below.</p> <p><strong>MOSFiT Output Files</strong></p> <p>The "mosfit" directory contains the raw output files from the Modular Open-Source Fitter for Transients (Guillochon et al. <a href="https://doi.org/10.3847/1538-4365/aab761">2017</a>). See its <a href="https://mosfit.readthedocs.io">documentation</a> for the output format. Keep in mind that some detections have been converted into nondetections in these files (see the paper for a full explanation), so you should not use them as a source for the photometry.</p> <p><strong>Magnetar Models</strong></p> <p>The "models" directory contains the range of models for each supernova. These are stored as <a href="https://docs.astropy.org/en/latest/io/ascii/ecsv.html">ECSV</a> files, which can be read using Astropy tables. The columns are MJD, filter, apparent magnitude (median, minimum, maximum), and absolute magnitude (median, minimum, maximum). The metadata contains the median and standard deviation of each parameter discussed in the paper, as well as the supernova name, distance modulus, and extinction.</p> <p><strong>Magnetar Parameters</strong></p> <p>The "params" directory contains the magnetar model parameters corresponding to each model realization, also stored as <a href="https://docs.astropy.org/en/latest/io/ascii/ecsv.html">ECSV</a> files. In other words, you can use these files to reproduce the posterior for each parameter. The metadata contains the units for each parameter and a LaTeX representation of each variable name.</p> <p><strong>Bump Models</strong></p> <p>The "bumps" directory contains the raw output for the bump modeling. These are stored as compressed Numpy files (.npz) and can be read using np.load. The keywords are as follows:</p> <ul> <li>"chain": the flattened MCMC chain, stored as a 2D array. The 0th dimension corresponds to the number of walkers times the number of steps. The 1st dimension corresponds to the parameters: amplitude, center (MJD), and FWHM (observed days). In the case of 2 bumps, the parameters are amplitude 1, center 1, FWHM 1, amplitude 2, center 2, FWHM 2.</li> <li>"pmed": the median of each parameter, followed by the median absolute deviation for each parameter (converted to a standard deviation).</li> <li>"energies": the integrated energy in each model realization (in watt-days).</li> <li>"energy": the median of the “energies” array.</li> <li>"denergy": the median absolute deviation of the “energies” array (converted to a standard deviation).</li> <li>"integral": the integral of the magnetar residuals before modeling (in watt-days). This is not used in the paper.</li> <li>"t0" and "t1": the range of MJDs used in the bump fitting.</li> </ul> <p>If you have any questions about this dataset, feel free to contact the author, <a href="mailto:griffin0@arizona.edu">Griffin Hosseinzadeh</a>.</p>
Enjoy Your Bump - Implementation Study
ClinicalTrials.gov study NCT04700501. IPD Sharing: NO. Countries: 1. Publications: 4.
Bump on the Ball: Impact of a Prenatal Exercise & Education Program on Birth Outcomes & Maternal Quality of Life
ClinicalTrials.gov study NCT02334397. IPD Sharing: Not stated. Countries: 1. Publications: 1.
◂Fig. 5 Cells of phylogenetically related strains (light microscopy). a Thecate cell in dorsal view. b Thecate cell in ventral view, note the sulcus extending onto the epitheca (arrow). c Putatively necrotic, thecate cell. d Thecate cell with one bulge on the epitheca (arrow), note that this was the only such cell among thousands of inspected cells. e, f Coccoid cells, apparently without thecae. g Two thecate cells enclosed in the parental theca. h Two connected, immotile cells enclosed in the parental thecae. j Lid of epitheca in dorsal-apical view (mirrored), composed of plates 2′‒4′, all intercalary plates and plates 2′′‒6′′. l‒m Same opened theca in ventral view (l) and dorsal view (m), note the sulcus extending onto the epitheca (arrow), the dorsal opening and all apical and all intercalary plates and plates 3′′‒5′′ remaining with the hypotheca. n Chloroplasts (as inferred from autofluorescence), note the space occupied by the nucleus. Plate labelling follows the Kofoidean notation, n′: apical plate; n′′: precingular plate; n′′′: postcingular plate; na: anterior intercalary plate. Scale= 10 µm in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
◂Fig. 5 Cells of phylogenetically related strains (light microscopy). a Thecate cell in dorsal view. b Thecate cell in ventral view, note the sulcus extending onto the epitheca (arrow). c Putatively necrotic, thecate cell. d Thecate cell with one bulge on the epitheca (arrow), note that this was the only such cell among thousands of inspected cells. e, f Coccoid cells, apparently without thecae. g Two thecate cells enclosed in the parental theca. h Two connected, immotile cells enclosed in the parental thecae. j Lid of epitheca in dorsal-apical view (mirrored), composed of plates 2′‒4′, all intercalary plates and plates 2′′‒6′′. l‒m Same opened theca in ventral view (l) and dorsal view (m), note the sulcus extending onto the epitheca (arrow), the dorsal opening and all apical and all intercalary plates and plates 3′′‒5′′ remaining with the hypotheca. n Chloroplasts (as inferred from autofluorescence), note the space occupied by the nucleus. Plate labelling follows the Kofoidean notation, n′: apical plate; n′′: precingular plate; n′′′: postcingular plate; na: anterior intercalary plate. Scale= 10 µm
Fig. 7 in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
Fig. 7 Original material of Peridinium gatunense var. carinatum (Steinecke & Lindemann, 1923), note the bulges on the hypotheca and that the sulcus does not extend onto the epitheca. (1) Ventral view with two bulges on hypotheca. (2) Dorsal view with two bulges on hypotheca having comb-like flanges. (3) Apical view with asymmetrical plate pattern, as it is characteristic for the Peridinium cinctum species group (Moestrup & Calado, 2018)
Treatment of Acne Keloidalis Nuchae (Razor Bumps Behind the Neck) Using UV Light Therapy
ClinicalTrials.gov study NCT01328080. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Mellow Bumps RCT - Antenatal Intervention for Vulnerable Women
ClinicalTrials.gov study NCT01590212. IPD Sharing: Not stated. Countries: 1. Publications: 0.
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