Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
4
datasets available to search
ShareScore release 0.9.0
Dataset results
4 results for “COI distance”
Raw data used for COI delineation of the Eupolybothrus species: Authors: Stoev et al. 2013 Data type: genomic The archive contains the following data: 1) fasta-Alignment as the basis for all analyses (.FASTA), 2) mega-file for the calculation of the genetic distances and the NJ tree (.MDSX), 3) NJ-tree in Newick format (.NWK), 4) graph of the TCS Software for the Statistical Parsimony method (.GRAPH) File: E_cavernicolus.rar from: Eupolybothrus cavernicolus Komerički & Stoev sp. n. (Chilopoda: Lithobiomorpha: Lithobiidae): the first eukaryotic species description combining transcriptomic, DNA barcoding and micro-CT imaging data - Biodiversity Data Journal 1: e1013 (28 October 2013) https://doi.org/10.3897/BDJ.1.e1013
<p>Authors: Stoev et al. 2013 Data type: genomic The archive contains the following data: 1) fasta-Alignment as the basis for all analyses (.FASTA), 2) mega-file for the calculation of the genetic distances and the NJ tree (.MDSX), 3) NJ-tree in Newick format (.NWK), 4) graph of the TCS Software for the Statistical Parsimony method (.GRAPH) File: E_cavernicolus.rar</p>
III Average nucleotide distances (%) based on the Kimura 2-parameter (K2P) model between Aselliscus spp., and associated outgroups based on complete mitochondrial Cytb (1,140 bp, below the diagonal) and COI (657 bp, above the diagonal) gene sequences in Description of a new species of the genus Aselliscus (Chiroptera, Hipposideridae) from Vietnam
III Average nucleotide distances (%) based on the Kimura 2-parameter (K2P) model between Aselliscus spp., and associated outgroups based on complete mitochondrial Cytb (1,140 bp, below the diagonal) and COI (657 bp, above the diagonal) gene sequences
FIGURE 35. Cladogram for COI-5P with Kumura 2 Parameter distance Model. 1 in Taxonomic remarks on Andraca Walker, 1865 (Lepidoptera: Bombycidae) with descriptions of five new species
FIGURE 35. Cladogram for COI-5P with Kumura 2 Parameter distance Model. 1—subgenus Chrypathemola Zolotuhin, subgen. nov., 2—subgenus Andraca s. str.
TABLE 3. Distance matrix from nucleotide sequences for COI, 16 S in A new species of stauromedusa, Calvadosia festivala (Cnidaria: Staurozoa: Kishinouyeidae) from India
<p><b>TABLE 3.</b> Distance matrix from nucleotide sequences for COI, 16S, and 18S alignments from <i>Calvadosia</i> species closely related to <i>Calvadosia festivala</i> n. sp. “−”: represents absence of data for comparison (COI not available for <i>C. tasmaniensis</i> and <i>C. corbini</i>).</p><table><tbody><tr><th>Species</th><th>1</th><th>2</th><th>3</th><th>4</th><th>5</th></tr></tbody><tbody><tr><th>1. <i>C. tasmaniensis</i></th><td>COI: 0.0000 16S: 0.0000 18S: 0.0000</td><td></td><td></td><td></td><td></td></tr><tr><th>2. <i>C. lewisi</i></th><td>COI: − 16S: 0.0945 18S: 0.0017</td><td>COI: 0.0000 16S: 0.0000 18S: 0.0000</td><td></td><td></td><td></td></tr><tr><th>3. <i>C. corbini</i></th><td>COI: − 16S: 0.0985 18S: 0.0017</td><td>COI: − 16S: 0.1266 18S: 0.0038</td><td>COI: 0.0000 16S: 0.0000 18S: 0.0000</td><td></td><td></td></tr><tr><th>4. <i>C. festivala</i> n. sp.</th><td>COI: − 16S: 0.1400 18S: 0.0000</td><td>COI: 0.2215 16S: 0.1629 18S: 0.0014</td><td>COI: − 16S: 0.1430 18S: 0.0014</td><td>COI: 0.0000 16S: 0.0000 18S: 0.0000</td><td></td></tr><tr><th>5. <i>Calvadosia</i> sp. Moorea</th><td>COI: − 16S: 0.1917 18S: 0.0085</td><td>COI: 0.2506 16S: 0.2197 18S: 0.0070</td><td>COI: − 16S: 0.21009 18S: 0.0045</td><td>COI: 0.2158 16S: 0.2193 18S: 0.0083</td><td>COI: 0.0000 16S: 0.0000 18S: 0.0000</td></tr></tbody></table>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.