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3 results for “COXI”
Mitochondrial COXI sequences and associated metazoan abundances in soils collected from the McMurdo Dry Valleys, Antarctica from 1995 to 2022
As part of an ongoing long-term sampling effort conducted by the McMurdo Dry Valleys Long Term Ecological Research (LTER) project, the top 10 cm of soil was collected from sampling sites across the McMurdo Dry Valleys region of Antarctica. A subset of these samples representing each valley and a differing disturbance legacy from the last glacial maximum were analyzed for this data package. Samples were collected between 1995 and 2022. In each sample, the abundances of three genera of nematodes (Scottnema, Eudorylaimus, and Plectus), tardigrades, and rotifers were calculated. Following metazoan extractions, individual Scottnema lindsayae were selected for mitochondrial Cytochrome c oxidase I (COX1) Sanger dideoxy sequencing. Sequencing resulted in 249 assembled sequences of 285 base pairs after alignment and trimming.
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732). in A study of genetic diversity among different population of Orthochirus sp. based on cytochrome C oxidase subunit I and 16srRNA sequencing
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732).
On following pages: 51. Spurred Leaf-nosed Bat (Hipposideros calcaratus); 52. awn-colored Leaf-nosed Bat (Hipposideros galeritus); 55. Aba Leaf-nosed Bat (Hipposideros abae); 56. Benito Leaf-nosed Bat (Hipposideros beatus}; 57. Sundevall's Leaf-nosed Bat (Hipposideros lamottei); 60. Noack's Leaf-nosed Bat (Hipposideros ruber}; 61. Maghreb Leaf-nosed (Hipposideros bicoloi}; 64. Short-headed Leaf-nosed Bat (Hipposideros breviceps}; 65. Least Leaf-nosed Bat (Hipposideros cervinus}; 53. Cox's Leaf-nosed Bat (Hipposideros coxi}; 54. Cantor's Leaf-nosed Bat (Hipposideros Leaf-nosed Bat (Hipposideros caffed: 58. Sooty Leaf-nosed Bat (Hipposideros fuliginosus); 59. Lamotte's Bat (Hipposideros tephrus}; 62. Dusky Leaf-nosed Bat (Hipposideros atei]; 63. Bicolored Leaf-nosed Bat cineraceus); 66. Large Mindanao Leaf-nosed Bat (Hipposideros coronatus}. in Hipposideridae
On following pages: 51. Spurred Leaf-nosed Bat (Hipposideros calcaratus); 52. awn-colored Leaf-nosed Bat (Hipposideros galeritus); 55. Aba Leaf-nosed Bat (Hipposideros abae); 56. Benito Leaf-nosed Bat (Hipposideros beatus}; 57. Sundevall's Leaf-nosed Bat (Hipposideros lamottei); 60. Noack's Leaf-nosed Bat (Hipposideros ruber}; 61. Maghreb Leaf-nosed (Hipposideros bicoloi}; 64. Short-headed Leaf-nosed Bat (Hipposideros breviceps}; 65. Least Leaf-nosed Bat (Hipposideros cervinus}; 53. Cox's Leaf-nosed Bat (Hipposideros coxi}; 54. Cantor's Leaf-nosed Bat (Hipposideros Leaf-nosed Bat (Hipposideros caffed: 58. Sooty Leaf-nosed Bat (Hipposideros fuliginosus); 59. Lamotte's Bat (Hipposideros tephrus}; 62. Dusky Leaf-nosed Bat (Hipposideros atei]; 63. Bicolored Leaf-nosed Bat cineraceus); 66. Large Mindanao Leaf-nosed Bat (Hipposideros coronatus}.
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