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60 results for “Dominance Analysis”

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edi56/100

Seasonal Soil Sampling of Grass-dominated, Mesquite-dominated, and Ecotone Sites at the Jornada Basin LTER site for the Analysis of Microbial Community Variance, 2022-2023

Fungal and bacterial soil communities were analyzed to assess the influence of woody shrub encroachment on soil microbial communities. Three study sites in the Jornada Long Term Ecological Research Site were selected to represent a grass-dominated site, a woody shrub dominated site, and an ecotone of woody shrubs and grass. The field sampling began in October 2022 and concluded in July 2023 with five sampling periods that aimed to capture seasonal variation: October 2022, January 2023, March 2023, May 2023, and July 2023. This dataset includes data pertaining to the soil microbial composition, environmental characteristics, microbial sequence processing, and documentation of the code utilized for data processing and statistical analyses. Data on soil microbial composition was collected from Phospholipid Fatty-Acid composition data from soil samples. Data on environmental characteristics were collected from on-site temperature probes, laboratory assessments of soil properties, and Jornada meteorological stations. Information pertaining to microbial sequence processing is included in the documented code as well as in the record of the primers utilized.

openCC0Apr 2025View details →
zenodo40/100

Рис. 5. АналиЗ линейной коррелЯции параметров макробентоса от доминируюЩей фракции в пробе грунта (А, Б) и глубины (В, Г). Fig. 5. Analysis of the linear correlation of macrobenthos parameters with the dominant fraction in the bottom sample (А, Б) and depth (В, Г). in Species composition and distribution of bivalve mollusks in plankton and benthos in Nevelsky Strait in summer

Рис. 5. АналиЗ линейной коррелЯции параметров макробентоса от доминируюЩей фракции в пробе грунта (А, Б) и глубины (В, Г). Fig. 5. Analysis of the linear correlation of macrobenthos parameters with the dominant fraction in the bottom sample (А, Б) and depth (В, Г).

opencc-by-4.0Dec 2020View details →
zenodo40/100

Fig. 5 in Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape

Fig. 5. Dhole (column A) and jackal (column B) step length and turning angle distributions of encamped (black) and exploratory (grey) behavioral states. Turning angles (in degrees) for both the encamped and exploratory states are plotted on the same polar plot for each species.

opencc-by-4.0Dec 2015View details →
zenodo40/100

Fig. 4 in Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape

Fig. 4. Comparison of both species' daily activity patterns. Smoothing was achieved by averaging over 4 hour time intervals. The 95% confidence intervals were estimated from the standard error of the mean step length.

opencc-by-4.0Dec 2015View details →
zenodo40/100

Fig. 3 in Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape

Fig. 3. Autocorrelation function (ACF) of: A, the dhole; and B, the jackal step length. Data points above the dotted line are classified as autocorrelated.

opencc-by-4.0Dec 2015View details →
zenodo40/100

Fig. 2 in Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape

Fig. 2. Decile-shaded isopleths of convex hull home ranges for the dhole and jackal in Khao Ang Rue Nai Wildlife Sanctuary, Thailand.

opencc-by-4.0Dec 2015View details →
zenodo40/100

Fig. 1 in Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape

Fig. 1. Dhole and jackal relocations overlaid on a land cover map of Khao Ang Rue Nai Wildlife Sanctuary, Thailand.

opencc-by-4.0Dec 2015View details →
zenodo40/100

Fig. 6. A in Comparative movement analysis for a sympatric dhole and golden jackal in a human-dominated landscape

Fig. 6. A, Semi-variance comparison of dhole and jackal positions. Since the dhole was monitored for a shorter time than the jackal (due to collar malfunctions), we present comparative data for this shorter time period. B, The complete jackal semi-variogram. Both semi-variograms are limited in scope to the first two thirds of the data, since estimates in the last third of the semi-variogram has very large confidence intervals. Semi-variance and 95% confidence intervals (CI) estimated from the standard error of the mean semivariance, were smoothed using a moving average over 20 lags.

opencc-by-4.0Dec 2015View details →
zenodo40/100

FIG. 11. — Russula shoreae D.Chakr., A.Ghosh, K in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 11. — Russula shoreae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. (from holotype): A-C, fresh and dissected basidiomata in the field and basecamp; D, E, transverse section through pileipellis showing elements; F, transverse section through lamellae showing basidia; G, H, transverse section through lamellae showing hymenial cystidia near the lamellae edges; I-M, transverse section through lamellae showing hymenial cystidia near the lamellae sides. Scale bars: A, B, 20 mm; D, 20 μm; E-M, 10 μm.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 9. — Russula pseudoflavida A in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 9. — Russula pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. (from holotype): A, basidiospore; B, basidia; C, hymenial gloeocystidia near the lamellae edges; D, hymenial gloeocystidia near the lamellae sides; E, marginal cells; F, elements of the pileipellis near the pileus margin: hyphal terminations; G, elements of the pileipellis near the pileus centre: hyphal terminations; H, doubtfull primordial hyphae. Scale bars: 10 µm.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 4 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 4. — Phylogram generated by Maximum Likelihood analysis based on nrITS sequence data of Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov. and allied species. Maximum Likelihood bootstrap support values (MLbs) ≥ 70% are shown on the left of "/" and Bayesian Posterior Probabilities (BPP) ≥ 0.95 are shown on the right above or below the branches at nodes. Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov. is placed in red font to highlight its phylogenetic position in the tree.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 2 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 2. — SEM micrographs of basidiospores: A, B, Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov.; C, D, R. pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov.; E, F, R. shoreae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. Scale bars: A-C, E, F, 2 μm; D, 1 μm.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 6 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 6. — Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov. (from holotype): A, basidiospore; B, hymenial gloeocystidia near the lamellae edges; C, elements of the pileipellis near the pileus centre: hyphal terminations; D, basidia; E, hymenial gloeocystidia near the lamellae sides; F, elements of the pileipellis near the pileus margin: hyphal terminations. Scale bars: 10 µm.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 8. — Russula pseudoflavida A in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 8. — Russula pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. (from holotype): A-C, fresh and dissected basidiomata in the field and basecamp; D-F, transverse section through pileipellis showing elements; G, primordial hyphae in carbolfuchsine; H-J, transverse section through lamellae showing hymenial gloeocystidia near the lamellae sides; K, transverse section through lamellae showing hymenial gloeocystidia near the lamellae edges. Scale bars: A, B, 20 mm; D, E, G, 20 μm; F, H-K, 10 μm.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 10 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 10. — Phylogram generated by Maximum Likelihood analysis based on nrITS sequence data of Russula shorae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. and their allied species. Maximum Likelihood bootstrap support values (MLbs) ≥ 70% are shown on the left of "/" and Bayesian Posterior Probabilities (BPP) ≥ 0.95 are shown on the right above or below the branches at nodes. Russula shorae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. is placed in red font to highlight their phylogenetic positions in the tree.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 1 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 1. — Distributional map and habitat of Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov., R. pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. and R. shoreae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. in India.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 7 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 7. — Phylogram generated by Maximum Likelihood analysis based on nrITS sequence data of Russula pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. and allied species. Maximum Likelihood bootstrap support values (MLbs) ≥ 70% are shown on the left of "/" and Bayesian Posterior Probabilities (BPP) ≥ 0.95 are shown on the right above or below the branches at nodes. Russula pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. is placed in red font to highlight its phylogenetic position in the tree.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 12. — Russula shoreae D.Chakr., A.Ghosh, K in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 12. — Russula shoreae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. (from holotype): A, basidiospore; B, elements of the pileipellis near the pileus margin: hyphal terminations and pileocystidia; C, hymenial cystidia near the lamellae sides; D, basidia; E, hymenial cystidia near the lamellae edges; F, elements of the pileipellis near the pileus centre: hyphal terminations and pileocystidia. Scale bars: 10 µm.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 3 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 3. — Phylogram generated by Maximum Likelihood analysis based on combined sequence data of nrLSU, mtSSU and rpb2 for Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov., R. pseudoflavida A.Ghosh, Hembrom, I.Bera & Buyck, sp. nov. and R. shoreae D.Chakr., A.Ghosh, K.Das & Buyck, sp. nov. and their allied species. Maximum Likelihood bootstrap support values (MLbs) ≥ 70% are shown on the left of "/" and Bayesian Posterior Probabilities (BPP) ≥ 0.95 are shown on the right above or below the branches at nodes. The new species are placed in red font to highlight their phylogenetic positions in the tree.

opencc-zeroMar 2023View details →
zenodo40/100

FIG. 5 in Three new species of genus Russula Pers. from Sal dominated forests of tropical India based on morphotaxonomy and multigene phylogenetic analysis

FIG. 5. — Russula boddingii Hembrom, D.Chakr., A.Ghosh & K.Das, sp. nov. (from holotype): A-D, fresh and dissected basidiomata in the field and basecamp; E, F, transverse section through pileipellis showing elements; G, transverse section through lamellae showing hymenial gloeocystidia near the lamellae edges; H, I, transverse section through lamellae showing hymenial gloeocystidia near the lamellae sides; J, transverse section through lamellae showing basidia. Scale bars: A, 40 mm; E, 100 μm; F-J, 10 μm.

opencc-zeroMar 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record