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zenodo48/100

Dataset - Young children's eating in the absence of hunger

<p>Dataset corresponding&nbsp;to a paper that has been submitted for publication. The objective of&nbsp;the&nbsp;study was to assess how children&rsquo;s eating in the absence of hunger (EAH) is related to their inhibitory control, BMI z-scores and to maternal controlling feeding practices.</p> <p>Information about the dataset and the corresponding documents can be found in the document &quot;Metadata-paper-EAH.docx&quot;.</p>

opencc-by-4.0Jan 2021View details →
zenodo48/100

Dataset - paper: Child eating behaviors, parental feeding practices and food shopping motivations during the COVID-19 lockdown in France

<p>Dataset corresponding&nbsp;to a paper that has been published in Appetite (Philippe K, Chabanet C, Issanchou S, Monnery-Patris S. <em>Child eating behaviors, parental feeding practices and food shopping motivations during the COVID-19 lockdown in France: (How) did they change? </em>Appetite. 2021 Jun 1;161:105132. doi: <strong>10.1016/j.appet.2021.105132</strong>. Epub 2021 Jan 23. PMID: 33493611; PMCID: PMC7825985).</p> <p>The objective of&nbsp;the&nbsp;study was&nbsp;to evaluate possible changes in eating behaviors in children aged 3&ndash;12 years, in parental eating and cooking behaviors, in parental feeding practices, and also in parental motivations when shopping for food during the lockdown, compared to the period before the lockdown.</p> <p>Information about the dataset and the corresponding documents can be found in the document &quot;Metadata-paper-COVID.docx&quot;.</p>

opencc-by-4.0Dec 2021View details →
zenodo44/100

EAT example applications

<p>These are example applications for the <a href="../doi/10.5281/zenodo.10306435">Ensemble and Assimilation Tool (EAT).</a></p> <p>Instructions for running these examples can be found in the contained&nbsp;<code>README.md</code>.</p> <p>This updated version uses Jupyter notebooks for all three applications. It requires EAT version 1.1 or higher.</p>

opencc-by-4.0Dec 2023View details →
zenodo44/100

GENEActiv accelerometer files collected during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [Eng: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"] (anonymized version - third part)

<p><a title="GENEActiv" href="https://activinsights.com/technology/geneactiv/" target="_blank" rel="noopener">GENEActiv</a> accelerometer .csv files converted with a 1 second epoch from raw GENEActiv .bin files recorded during the project entitled "<strong>Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXI&egrave;me si&egrave;cle: exemple de la Nouvelle-Cal&eacute;donie</strong>" [en: "<strong>Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia</strong>"]. Devices are 60-Hz triaxial accelerometers.</p> <p>This dataset also contains <strong>participantCharacteristics.csv</strong> that povides basic information about participants and <strong>read_a_binFile_share.R</strong> that is a short R code aiming at converting and saving accelerometer data from .bin files in 1 second epoch .csv files (consider the Methods section).</p> <p>Participant characteristics: 10 to 16 years old students and some parents.</p> <p>Number of participants: 231 (206 adolescents + 25 adults).</p> <p>Year of the study: 2018 - 2019.</p> <p>Place of the study: New Caledonia.</p> <p>The accelerometer .csv files with a 1 second epoch and extracted from raw .bin files are available in open datasets:</p> <ul> <li><a title="Open dataset - first part" href="https://doi.org/10.5281/zenodo.12615468" target="_blank" rel="noopener">anonymized version - first part</a></li> <li><a title="Open dataset - second part" href="https://doi.org/10.5281/zenodo.12638746" target="_blank" rel="noopener">anonymized version - second part</a></li> <li><a title="Open dataset - third part" href="https://doi.org/10.5281/zenodo.12682660" target="_blank" rel="noopener">anonymized version - third part</a></li> </ul> <p>The accelerometer raw .bin files are available in&nbsp;<strong>restricted datasets</strong>:</p> <ul> <li><a title="Restricted dataset - first part" href="https://doi.org/10.5281/zenodo.11594645" target="_blank" rel="noopener">non-anonymized version - first part</a></li> <li><a title="Restricted dataset - second part" href="https://doi.org/10.5281/zenodo.12638965" target="_blank" rel="noopener">non-anonymized version - second part</a></li> <li><a title="Restricted dataset - third part" href="https://doi.org/10.5281/zenodo.12661429" target="_blank" rel="noopener">non-anonymized version - third part</a></li> </ul> <p>Other participant characteristics (age, place of living, cultural community and socio-economic status) are available in a <a title="Information associated with GENEActiv accelerometer files collected during the project entitled &quot;Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXI&egrave;me si&egrave;cle: exemple de la Nouvelle-Cal&eacute;donie&quot; [en: &quot;Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia&quot;] (non-anonymized information version)" href="https://doi.org/10.5281/zenodo.12195186" target="_blank" rel="noopener">restricted non-anonymized dataset</a>.</p> <p>When using this dataset, please cite the following reference:<br><a title="Wattelez et al. 2025" href="https://doi.org/10.1016/j.dib.2024.111228" target="_blank" rel="noopener">G. Wattelez, S. Frayon, O. Galy, Assessing physical activity/behavior of adolescents living in the Pacific with accelerometer data: 231 GENEActiv records in New Caledonia, Data in Brief 58 (2025) 111228, doi: 10.1016/j.dib.2024.111228</a></p>

embargoedcc-by-4.0Jun 2024View details →
zenodo44/100

GENEActiv accelerometer files collected during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [Eng: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"] (anonymized version - second part)

<p><a title="GENEActiv" href="https://activinsights.com/technology/geneactiv/" target="_blank" rel="noopener">GENEActiv</a> accelerometer .csv files converted with a 1 second epoch from raw GENEActiv .bin files recorded during the project entitled "<strong>Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXI&egrave;me si&egrave;cle: exemple de la Nouvelle-Cal&eacute;donie</strong>" [en: "<strong>Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia</strong>"]. Devices are 60-Hz triaxial accelerometers.</p> <p>This dataset also contains <strong>participantCharacteristics.csv</strong> that povides basic information about participants and <strong>read_a_binFile_share.R</strong> that is a short R code aiming at converting and saving accelerometer data from .bin files in 1 second epoch .csv files (consider the Methods section).</p> <p>Participant characteristics: 10 to 16 years old students and some parents.</p> <p>Number of participants: 231 (206 adolescents + 25 adults).</p> <p>Year of the study: 2018 - 2019.</p> <p>Place of the study: New Caledonia.</p> <p>The accelerometer .csv files with a 1 second epoch and extracted from raw .bin files are available in open datasets:</p> <ul> <li><a title="Open dataset - first part" href="https://doi.org/10.5281/zenodo.12615468" target="_blank" rel="noopener">anonymized version - first part</a></li> <li><a title="Open dataset - second part" href="https://doi.org/10.5281/zenodo.12638746" target="_blank" rel="noopener">anonymized version - second part</a></li> <li><a title="Open dataset - third part" href="https://doi.org/10.5281/zenodo.12682660" target="_blank" rel="noopener">anonymized version - third part</a></li> </ul> <p>The accelerometer raw .bin files are available in&nbsp;<strong>restricted datasets</strong>:</p> <ul> <li><a title="Restricted dataset - first part" href="https://doi.org/10.5281/zenodo.11594645" target="_blank" rel="noopener">non-anonymized version - first part</a></li> <li><a title="Restricted dataset - second part" href="https://doi.org/10.5281/zenodo.12638965" target="_blank" rel="noopener">non-anonymized version - second part</a></li> <li><a title="Restricted dataset - third part" href="https://doi.org/10.5281/zenodo.12661429" target="_blank" rel="noopener">non-anonymized version - third part</a></li> </ul> <p>Other participant characteristics (age, place of living, cultural community and socio-economic status) are available in a <a title="Information associated with GENEActiv accelerometer files collected during the project entitled &quot;Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXI&egrave;me si&egrave;cle: exemple de la Nouvelle-Cal&eacute;donie&quot; [en: &quot;Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia&quot;] (non-anonymized information version)" href="https://doi.org/10.5281/zenodo.12195186" target="_blank" rel="noopener">restricted non-anonymized dataset</a>.</p> <p>When using this dataset, please cite the following reference:<br><a title="Wattelez et al. 2025" href="https://doi.org/10.1016/j.dib.2024.111228" target="_blank" rel="noopener">G. Wattelez, S. Frayon, O. Galy, Assessing physical activity/behavior of adolescents living in the Pacific with accelerometer data: 231 GENEActiv records in New Caledonia, Data in Brief 58 (2025) 111228, doi: 10.1016/j.dib.2024.111228</a></p>

embargoedcc-by-4.0Jun 2024View details →
zenodo44/100

Taste sensitivity and eating behaviour preadolescent children-Extended data

<p>This data set contained children&#39;s detection threshold responses, their eating behaviour score based on CEBQ (Child Eating Behaviour Questionnaire), and food propensity based on FPQ (Food Propensity Questionnaire). In addition, this extended data also provides the raw questionnaires of CEBQ and FPQ used in the study.</p>

opencc-by-4.0Sep 2021View details →
zenodo40/100

Appendix List of samples of deep frozen frog legs with purchase date, collection number, haplotype number, taxonomic identification, tibia length (TL) and estimated snout vent length (SVL). in Which frog's legs do froggies eat? The use of DNA barcoding for identification of deep frozen frog legs (Dicroglossidae, Amphibia) commercialized in France

Appendix List of samples of deep frozen frog legs with purchase date, collection number, haplotype number, taxonomic identification, tibia length (TL) and estimated snout vent length (SVL).

opencc-by-3.0Feb 2017View details →
zenodo40/100

Fig. 2. Minimum spanning network depicting relationships among 16S in Which frog's legs do froggies eat? The use of DNA barcoding for identification of deep frozen frog legs (Dicroglossidae, Amphibia) commercialized in France

Fig. 2. Minimum spanning network depicting relationships among 16S haplotypes of Fejervarya cancrivora (Gravenhorst, 1829). The size of each circle is proportional to the haplotype frequency and the lengths of the connecting lines are proportional to the number of mutations. Colors refer to distinct regions (Indonesia: Java, Sumatra, Bali, Kalimantan, Bangka; Malaysia; Taiwan) and commercialized frogs of unknown origin are in black.

opencc-by-3.0Feb 2017View details →
zenodo40/100

Fig. 3. Histograms. A in Which frog's legs do froggies eat? The use of DNA barcoding for identification of deep frozen frog legs (Dicroglossidae, Amphibia) commercialized in France

Fig. 3. Histograms. A. Snout vent length (in mm) in adult Fejervarya cancrivora (Gravenhorst, 1829) from samples collected for scientific purposes (Boulenger 1920) and collection specimens as mentioned in Material and methods. B. Snout vent length estimated from tibia length of genetically identified frog legs from French supermarkets (specimen list, see Appendix).

opencc-by-3.0Feb 2017View details →
zenodo40/100

Fig. 1 in Which frog's legs do froggies eat? The use of DNA barcoding for identification of deep frozen frog legs (Dicroglossidae, Amphibia) commercialized in France

Fig. 1. Phylogeny of Indonesian species of Fejervarya and Limnonectes recovered by the Bayesian analysis (GTR + I + G model). Hoplobatrachus rugulosus (Wiegmann, 1834) and Occidozyga laevis (Günther, 1858) were used as outgroups. Numbers on nodes represent Bayesian posterior probabilities, * indicates a value higher than 0.98. Only values higher than 0.75 are represented. h01 to h18 indicate the 18 haplotypes from frozen frog legs recovered in this study.

opencc-by-3.0Feb 2017View details →
zenodo40/100

Figure 3 in You are what you eat: native versus exotic Crotalaria species (Fabaceae) as host plants of the Ornate Bella Moth, Utetheisa ornatrix (Lepidoptera: Erebidae: Arctiinae)

Figure 3. Rates of development of Utetheisa ornatrix larvae on different species of native and exotic Crotalaria in Florida and effect of leaves versus beans in the diet (see text for details): (A) partial development of larvae on the native C. rotundifolia versus exotic C. lanceolata; (B, C) partial development of larvae on the native C. pumila versus exotic C. lanceolata; (D, E) development of larvae on the exotic C. spectabilis/retusa versus exotic C. lanceolata; (F) development of larvae on C. incana (native to U. ornatrix range in the Neotropics, but introduced to Florida) versus exotic C. lanceolata. (F – based on data from Sourakov and Locascio 2013).

opencc-by-4.0Mar 2015View details →
zenodo40/100

Figure 4 in You are what you eat: native versus exotic Crotalaria species (Fabaceae) as host plants of the Ornate Bella Moth, Utetheisa ornatrix (Lepidoptera: Erebidae: Arctiinae)

Figure 4. Fore wing size of Utetheisa ornatrix raised on different species of native and exotic Crotalaria and effect of leaves versus beans in the diet (see text for details): (A) Fore wing size of

opencc-by-4.0Mar 2015View details →
zenodo40/100

Figure 2 in You are what you eat: native versus exotic Crotalaria species (Fabaceae) as host plants of the Ornate Bella Moth, Utetheisa ornatrix (Lepidoptera: Erebidae: Arctiinae)

Figure 2. (A) Understorey of the Florida hammock habitat occupied with invasive exotic Crotalaria spectabilis; (B) a clearing in a secondary Florida habitat, overgrown with exotic Crotalaria pallida; (C, D) mature larvae of U. ornatrix prefer pods of C. spectabilis over leaves; (E) carpenter ants are attracted to the extrafloral nectaries of C. lanceolata; (F, G) larva of U. ornatrix on C. pumila and a pod destroyed by it; (H) mature larva of U. ornatrix inside a pod of C. incana; (I, J) pods of C. pallida are numerous and large and provide ample food and shelter for U. ornatrix; (K) empty pods of C. spectabilis in December with all of their seeds consumed by U. ornatrix larvae; (L) in December, C. retusa becomes the preferred hostplant of U. ornatrix in the C. spectabilis-dominated habitat, when the latter declines; similarly, C. pumila becomes preferred for oviposition in C. lanceolata-dominated habitat; (M) the seeds of C. retusa are well protected by thick walls of the pod; here, a third instar larva is unable to penetrate it; (N) onset of the ultimate instar; (O–Q) prepupa-to-pupa development of U. ornatrix.

opencc-by-4.0Mar 2015View details →
zenodo40/100

Figure 1 in You are what you eat: native versus exotic Crotalaria species (Fabaceae) as host plants of the Ornate Bella Moth, Utetheisa ornatrix (Lepidoptera: Erebidae: Arctiinae)

Figure 1. (A) In the wild population of U. ornatrix, adult moth landing on the flower of exotic Crotalaria retusa, Micanopy, Florida; (B) a typical size of a moth from a wild population at Cross Creek, Florida, resulting from larval feeding on C. rotundifolia leaves (top) and its offspring raised in the laboratory on beans of C. spectabilis (bottom) (fore wing length = 20 mm); (C) a single egg batch split in two (experimental and control groups) prior to hatching; (D) hostplant preference test using mature larvae of U. ornatrix inside a tray; (E) differences in pod size and seed volume in six Crotalaria species found in Florida; (F) difference in sprouting rate under similar conditions: native Crotalaria pumila shows much slower sprouting rate than introduced invasive Crotalaria species; (G) upland pine habitat on the University of Florida campus overtaken by thousands of exotic Crotalaria lanceolata plants with a sporadic native C. pumila in the midst (October 2014); (H) U. ornatrix eggs on C. lanceolata; (I) first instar larvae; (J) third instar larva.

opencc-by-4.0Mar 2015View details →
zenodo40/100

FIGURE2 in Stance and gait in the flesh-eating dinosaur Tyrannosuurus

FIGURE2. The knee-joint of a megalosaurian to show the femoral condyle (indicated by an arrow) inserted between the tibia and fibula. This is similar to the knee-jointof Tyrannosaurus.

opencc-by-4.0Jun 1970View details →
zenodo40/100

Wrist-mounted IMU data towards the investigation of free-living human eating behavior - the Free-living Food Intake Cycle (FreeFIC) dataset

<p><strong>Introduction</strong></p> <p>The Free-living Food Intake Cycle (FreeFIC) dataset was created by the <a href="http://mug.ee.auth.gr">Multimedia Understanding Group</a> towards the investigation of <em>in-the-wild</em> eating behavior. This is achieved by recording the subjects&rsquo; meals as a small part part of their everyday life, unscripted, activities. The FreeFIC dataset contains the <span class="math-tex">\(3D\)</span> acceleration and orientation velocity signals (<span class="math-tex">\(6\)</span> DoF) from <span class="math-tex">\(22\)</span> in-the-wild sessions provided by <span class="math-tex">\(12\)</span> unique subjects. All sessions were recorded using a commercial smartwatch (<span class="math-tex">\(6\)</span> using the Huawei Watch 2&trade; and the MobVoi TicWatch&trade; for the rest) while the participants performed their everyday activities. In addition, FreeFIC also contains the start and end moments of each meal session as reported by the participants.</p> <p><strong>Description</strong></p> <p>FreeFIC includes <span class="math-tex">\(22\)</span> in-the-wild sessions that belong to <span class="math-tex">\(12\)</span> unique subjects. Participants were instructed to wear the smartwatch to the hand of their preference well ahead before any meal and continue to wear it throughout the day until the battery is depleted. In addition, we followed a self-report labeling model, meaning that the ground truth is provided from the participant by documenting the start and end moments of their meals to the best of their abilities as well as the hand they wear the smartwatch on. The total duration of the <span class="math-tex">\(22\)</span> recordings sums up to <span class="math-tex">\(112.71\)</span> hours, with a mean duration of <span class="math-tex">\(5.12\)</span> hours. Additional data statistics can be obtained by executing the provided python script <em>stats_dataset.py</em>. Furthermore, the accompanying python script <em>viz_dataset.py </em>will visualize the IMU signals and ground truth intervals for each of the recordings. Information on how to execute the Python scripts can be found below.</p> <pre><code># The script(s) and the pickle file must be located in the same directory. # Tested with Python 3.6.4 # Requirements: Numpy, Pickle and Matplotlib # Calculate and echo dataset statistics $ python stats_dataset.py # Visualize signals and ground truth $ python viz_dataset.py</code></pre> <p>FreeFIC is also tightly related to Food Intake Cycle (FIC), a dataset we created in order to investigate the <em>in-meal</em> eating behavior. More information about FIC can be found <a href="https://zenodo.org/record/4421861">here</a> and <a href="https://mug.ee.auth.gr/intake-cycle-detection/">here</a>.</p> <p><strong>Publications</strong></p> <p>If you plan to use the FreeFIC dataset or any of the resources found in this page, please cite our work:</p> <pre><code>@article{kyritsis2020data, title={A Data Driven End-to-end Approach for In-the-wild Monitoring of Eating Behavior Using Smartwatches}, author={Kyritsis, Konstantinos and Diou, Christos and Delopoulos, Anastasios}, journal={IEEE Journal of Biomedical and Health Informatics}, year={2020}, publisher={IEEE}}</code></pre> <pre><code>@inproceedings{kyritsis2017automated, title={Detecting Meals In the Wild Using the Inertial Data of a Typical Smartwatch}, author={Kyritsis, Konstantinos and Diou, Christos and Delopoulos, Anastasios}, booktitle={2019 41th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)}, year={2019}, organization={IEEE}} </code></pre> <p><strong>Technical details</strong></p> <p>We provide the FreeFIC dataset as a <a href="https://docs.python.org/3/library/pickle.html">pickle</a>. The file can be loaded using Python in the following way:</p> <pre><code class="language-python">import pickle as pkl import numpy as np with open('./FreeFIC_FreeFIC-heldout.pkl','rb') as fh: dataset = pkl.load(fh)</code></pre> <p>The dataset variable in the snipet above is a dictionary with <span class="math-tex">\(5\)</span> keys. Namely:</p> <ul> <li>&#39;subject_id&#39;</li> <li>&#39;session_id&#39;</li> <li>&#39;signals_raw&#39;</li> <li>&#39;signals_proc&#39;</li> <li>&#39;meal_gt&#39;</li> </ul> <p>The contents under a specific key can be obtained by:</p> <pre><code class="language-python">sub = dataset['subject_id'] # for the subject id ses = dataset['session_id'] # for the session id raw = dataset['signals_raw'] # for the raw IMU signals proc = dataset['signals_proc'] # for the processed IMU signals gt = dataset['meal_gt'] # for the meal ground truth </code></pre> <p>The <em>sub</em>, <em>ses</em>, <em>raw</em>, <em>proc </em>and <em>gt </em>variables in the snipet above are lists with a length equal to <span class="math-tex">\(22\)</span>. Elements across all lists are aligned; e.g., the <span class="math-tex">\(3\)</span>rd element of the list under the &#39;session_id&#39; key corresponds to the <span class="math-tex">\(3\)</span>rd element of the list under the &#39;signals_proc&#39; key.</p> <p><em>sub</em>: list<br> Each element of the sub list is a scalar (integer) that corresponds to the unique identifier of the subject that can take the following values: <span class="math-tex">\([1, 2, 3, 4, 13, 14, 15, 16, 17, 18, 19, 20]\)</span>. It should be emphasized that the subjects with ids <span class="math-tex">\(15, 16, 17, 18, 19\)</span> and <span class="math-tex">\(20\)</span> belong to the held-out part of the FreeFIC dataset (more information can be found in <span class="math-tex">\( \)</span>the publication titled &quot;A Data Driven End-to-end Approach for In-the-wild Monitoring of Eating Behavior Using Smartwatches&quot; by Kyritsis <em>et al).</em> Moreover, the subject identifier in FreeFIC is in-line with the subject identifier in the FIC dataset (more info <a href="https://zenodo.org/record/4421861">here</a> and <a href="https://mug.ee.auth.gr/intake-cycle-detection/">here</a>); i.e., FIC&rsquo;s subject with id equal to&nbsp;<span class="math-tex">\(2\)</span>&nbsp; is the same person as FreeFIC&rsquo;s subject with id equal to <span class="math-tex">\(2\)</span>.</p> <p><em>ses: </em>list<br> Each element of this list is a scalar (integer) that corresponds to the unique identifier of the session that can range between <span class="math-tex">\(1\)</span> and <span class="math-tex">\(5\)</span>. It should be noted that not all subjects have the same number of sessions.</p> <p><em>raw</em>: list<br> Each element of this list is dictionary with the &#39;acc&#39; and &#39;gyr&#39; keys.<br> The data under the &#39;acc&#39; key is a <span class="math-tex">\(N_{acc} \times 4\)</span> numpy.ndarray that contains the timestamps in seconds (first column) and the <span class="math-tex">\(3D\)</span> raw accelerometer measurements in&nbsp;<span class="math-tex">\(g\)</span> (second, third and forth columns - representing the <span class="math-tex">\(x, y \)</span> and&nbsp;<span class="math-tex">\(z\)</span> axis, respectively). The data under the &#39;gyr&#39; key is a <span class="math-tex">\(N_{gyr} \times 4\)</span> numpy.ndarray that contains the timestamps in seconds (first column) and the <span class="math-tex">\(3D\)</span> raw gyroscope measurements in <span class="math-tex">\({degrees}/{second}\)</span>(second, third and forth columns - representing the <span class="math-tex">\(x, y \)</span> and&nbsp;<span class="math-tex">\(z\)</span> axis, respectively). All sensor streams are transformed in such a way that reflects all participants wearing the smartwatch at the same hand with the same orientation, thusly achieving data uniformity. This transformation is in par with the signals in the FIC dataset (more info <a href="https://zenodo.org/record/4421861">here</a> and <a href="https://mug.ee.auth.gr/intake-cycle-detection/">here</a>). Finally, the length of the raw accelerometer and gyroscope numpy.ndarrays is different <span class="math-tex">\((N_{acc} \neq N_{gyr})\)</span>. This behavior is predictable and is caused by the Android platform.</p> <p><em>proc: </em>list<br> Each element of this list is an <span class="math-tex">\(M\times7\)</span>&nbsp; numpy.ndarray that contains the timestamps,&nbsp;<span class="math-tex">\(3D\)</span> accelerometer and&nbsp;gyroscope measurements for each meal. Specifically, the first column contains the timestamps in seconds, the second, third and forth columns contain the <em><span class="math-tex">\(x,y\)</span></em> and <span class="math-tex">\(z\)</span> accelerometer values in&nbsp;<span class="math-tex">\(g\)</span><strong> </strong>and the fifth, sixth and seventh columns contain the <em><span class="math-tex">\(x,y\)</span></em> and <span class="math-tex">\(z\)</span> gyroscope values in <span class="math-tex">\({degrees}/{second}\)</span>. Unlike elements in the <em>raw </em>list, processed measurements (in the <em>proc</em> list) have a constant sampling rate of <span class="math-tex">\(100\)</span> Hz and the accelerometer/gyroscope measurements are aligned with each other. In addition, all sensor streams are transformed in such a way that reflects all participants wearing the smartwatch at the same hand with the same orientation, thusly achieving data uniformity. This transformation is in par with the signals in the FIC dataset (more info <a href="https://zenodo.org/record/4421861">here</a> and <a href="https://mug.ee.auth.gr/intake-cycle-detection/">here</a>). <em>No other preprocessing is performed on the data</em>; e.g., the acceleration component due to the Earth&#39;s gravitational field is present at the processed acceleration measurements. The potential researcher can consult the article &quot;A Data Driven End-to-end Approach for In-the-wild Monitoring of Eating Behavior Using Smartwatches&quot; by Kyritsis <em>et al. </em>on how to further preprocess the IMU signals (i.e., smooth and remove the gravitational component).</p> <p><em>meal_gt: </em>list<br> Each element of this list is a<strong>&nbsp;<span class="math-tex">\(K\times2\)</span></strong> matrix. Each row represents the meal intervals for the specific in-the-wild session. The first column contains the timestamps of the meal start moments<strong> </strong>whereas the second one the timestamps of the meal end moments. All timestamps are in seconds. The number of meals <span class="math-tex">\(K\)</span> varies across recordings (e.g., a recording exist where a participant consumed two meals).</p> <p><strong>Ethics and funding</strong></p> <p>Informed consent, including permission for third-party access to anonymised data, was obtained from all subjects prior to their engagement in the study. The work has received funding from the European Union&#39;s Horizon 2020 research and innovation programme under Grant Agreement No 727688 - <a href="https://bigoprogram.eu/">BigO: Big data against childhood obesity</a>.</p> <p><strong>Contact</strong></p> <p>Any inquiries regarding the FreeFIC dataset should be addressed to:</p> <p>Dr. Konstantinos KYRITSIS</p> <p>Multimedia Understanding Group (MUG)<br> Department of Electrical &amp; Computer Engineering<br> Aristotle University of Thessaloniki<br> University Campus, Building C, 3rd floor<br> Thessaloniki, Greece, GR54124</p> <p>Tel: +30 2310 996359,&nbsp;996365&nbsp;<br> Fax: +30 2310 996398<br> E-mail: kokirits [at] mug [dot] ee [dot] auth [dot] gr</p>

opencc-by-4.0Aug 2019View details →
zenodo40/100

Wrist-mounted IMU data towards the investigation of in-meal human eating behavior - the Food Intake Cycle (FIC) dataset

<p><strong>Introduction</strong></p> <p>The Food Intake Cycle (FIC) dataset was created by the <a href="http://mug.ee.auth.gr">Multimedia Understanding Group</a> towards the investigation of <em>in-meal</em> eating behavior. The FIC dataset contains the triaxial acceleration and orientation velocity signals (<span class="math-tex">\(6\)</span> DoF) from <span class="math-tex">\(21\)</span> meal sessions provided by <span class="math-tex">\(12\)</span> unique subjects. All meals were recorded in the restaurant of Aristotle University of Thessaloniki using a commercial smartwatch, the Microsoft Band <span class="math-tex">\(2\)</span>&trade; for ten out of the twenty-one meals and the Sony Smartwatch <span class="math-tex">\(2\)</span>&trade; for the remaining meals. In addition, the start and end moments of each food intake cycle as well as of each micromovement are annotated throughout the FIC dataset.</p> <p><strong>Description</strong></p> <p>A total of <span class="math-tex">\(12\)</span> subjects were recorded while eating their launch at the university&rsquo;s cafeteria. The total duration of the <span class="math-tex">\(21\)</span> meals sums up to <span class="math-tex">\(246\)</span> minutes, with a mean duration of <span class="math-tex">\(11.7\)</span> minutes. Each participant was free to select the food of their preference, typically consisting of a starter soup, a salad, a main course and a desert. Prior to the recording, the participant was asked to wear the smartwatch to the hand that he typically uses in his everyday life to manipulate the fork and/or the spoon. A GoPro&trade; Hero <span class="math-tex">\(5\)</span> camera was already set at the table of the participant using a small, <span class="math-tex">\(23\)</span> cm in height, tripod facing the participant, including both the food tray and upper body part in it&rsquo;s field of view. The purpose of video recording was to obtain ground truth data by manually annotating the IMU sequences based on the video stream. Participants were also asked to perform a clapping hand movement both at the start and end of the meal, for synchronization purposes (as this movement is distinctive in the accelerometer signal). No other instructions were given to the participants. It should be noted that the FIC dataset does not contain instances related with liquid consumption or eating without the fork, knife and spoon (e.g. eating directly with hands). The accompanying python script <em>viz_dataset.py </em>will visualize the IMU signals and food intake cycle (i.e., bite) ground truth intervals for each of the recordings. Information on how to execute the Python scripts can be found below.</p> <pre><code class="language-python"># The script(s) and the pickle file must be located in the same directory. # Tested with Python 3.6.4 # Requirements: Numpy, Pickle and Matplotlib # Visualize signals and ground truth $ python viz_dataset.py</code></pre> <p>FIC is also tightly related to FreeFIC, a dataset we created in order to investigate the <em>in-the-wild </em>eating behavior. More information on FreeFIC can be found <a href="https://zenodo.org/record/4421951">here</a> and <a href="https://mug.ee.auth.gr/free-food-intake-cycle-detection/">here</a>.</p> <p><strong>Annotation</strong></p> <p><em>Micromovements</em></p> <p>For all recordings, the start and end points of all <span class="math-tex">\(6\)</span> micromovements of interest were manually labeled. The micromovements of interest include:</p> <ul> <li><strong>p</strong>ick food, wrist manipulates a fork to pick food from the plate</li> <li><strong>u</strong>pwards, wrist moves upwards, towards the mouth area</li> <li><strong>d</strong>ownwards, wrist moves downwards, away from the mouth area</li> <li><strong>m</strong>outh, wrist inserts food in mouth</li> <li><strong>n</strong>o movement, wrist exhibits no movement</li> <li><strong>o</strong>ther movement, every other wrist movement</li> </ul> <p>The annotation process was performed in such a way that the start and end times of each micro-movement span the whole meal session, without overlapping each other.</p> <p><em>Food intake cycles</em></p> <p>For all recordings, we annotated the start and end points for each intake cycle (i.e. every bite). Each food intake cycle starts with a <strong>p</strong>, ends with a <strong>d </strong>and contains an <strong>m </strong>micromovement.</p> <p><strong>Publications</strong></p> <p>If you plan to use the FIC dataset or any of the resources found in this page, please cite our work:</p> <pre><code>@article{kyritsis2019modeling, title={Modeling Wrist Micromovements to Measure In-Meal Eating Behavior from Inertial Sensor Data}, author={Kyritsis, Konstantinos and Diou, Christos and Delopoulos, Anastasios}, journal={IEEE journal of biomedical and health informatics}, year={2019}, publisher={IEEE}}</code></pre> <pre><code>@inproceedings{kyritsis2017food, title={Food intake detection from inertial sensors using lstm networks}, author={Kyritsis, Konstantinos and Diou, Christos and Delopoulos, Anastasios}, booktitle={International Conference on Image Analysis and Processing}, pages={411--418}, year={2017}, organization={Springer}}</code></pre> <pre><code>@inproceedings{kyritsis2017automated, title={Automated analysis of in meal eating behavior using a commercial wristband IMU sensor}, author={Kyritsis, Konstantinos and Tatli, Christina Lefkothea and Diou, Christos and Delopoulos, Anastasios}, booktitle={2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)}, pages={2843--2846}, year={2017}, organization={IEEE}}</code></pre> <p><strong>Technical details</strong></p> <p>We provide the FIC dataset as a <a href="https://docs.python.org/3/library/pickle.html">pickle</a>. The file can be loaded using Python in the following way:</p> <pre><code class="language-python">import pickle as pkl import numpy as np with open('./FIC.pkl','rb') as fh: dataset = pkl.load(fh)</code></pre> <p>The <em>dataset </em>variable in the snipet above is a dictionary with <span class="math-tex">\(6\)</span> keys. Namely:</p> <ul> <li>&#39;subject_id&#39;</li> <li>&#39;session_id&#39;</li> <li>&#39;signals_raw&#39;</li> <li>&#39;signals_proc&#39;</li> <li>&#39;meal_gt&#39;</li> <li>&#39;bite_gt&#39;</li> </ul> <p>The contents under a specific key can be obtained by:</p> <pre><code>sub = dataset['subject_id'] # for the subject id ses = dataset['session_id'] # for the session id raw = dataset['signals_raw'] # for the raw IMU signals proc = dataset['signals_proc'] # for the processed IMU signals mm = dataset['mm_gt'] # for the micromovement ground truth bite = dataset['bite_gt'] # for the bite ground truth</code></pre> <p>The <em>sub</em>, <em>ses</em>, <em>raw</em>, <em>proc, mm </em>and<em> gt </em>variables in the snipet above are lists with a length equal to <span class="math-tex">\(21\)</span>. Elements across all lists are aligned; e.g., the <span class="math-tex">3</span>rd element of the list under the &#39;session_id&#39; key corresponds to the <span class="math-tex">3</span>rd element of the list under the &#39;signals_proc&#39; key.</p> <p><em>sub</em>: list<br> Each element of the sub list is a scalar (integer) that corresponds to the unique identifier of the subject that can take values between <span class="math-tex">\(1\)</span> and <span class="math-tex">\(12\)</span>. Moreover, the subject identifier in FIC is in-line with the subject identifier in the FreeFIC dataset (information available <a href="https://zenodo.org/record/4421951">here</a> and <a href="https://mug.ee.auth.gr/free-food-intake-cycle-detection/">here</a>); i.e., FIC&rsquo;s subject with id equal to&nbsp;<span class="math-tex">2</span>&nbsp; is the same person as FreeFIC&rsquo;s subject with id equal to <span class="math-tex">2</span>.</p> <p><em>ses: </em>list<br> Each element of this list is a scalar (integer) that corresponds to the unique identifier of the session that can range between <span class="math-tex">1</span> and <span class="math-tex">\(3\)</span>. It should be noted that not all subjects have the same number of sessions.</p> <p><em>raw</em>: list<br> Each element of this list is dictionary with the &#39;acc&#39;, &#39;gyr&#39; and &#39;offset&#39; keys.<br> The data under the &#39;acc&#39; key is a <span class="math-tex"><span class="math-tex">\(N_{acc}\times4\)</span></span> numpy.ndarray that contains the timestamps in seconds (first column) and the <span class="math-tex"><em><span class="math-tex">\(3D\)</span></em></span> raw accelerometer measurements in&nbsp;<span class="math-tex">\(g\)</span> (second, third and forth columns - representing the <span class="math-tex">\(x, y\)</span> and&nbsp;<span class="math-tex"><em><span class="math-tex">\(z\)</span></em></span> axis, respectively). The data under the &#39;gyr&#39; key is a&nbsp;<span class="math-tex"><span class="math-tex">\(N_{gyr} \times 4\)</span></span> numpy.ndarray that contains the timestamps in seconds (first column) and the&nbsp;<span class="math-tex">\(3D\)</span> raw gyroscope measurements in <span class="math-tex">\(degrees/second\)</span>(second, third and forth columns - representing the<span class="math-tex"><em>&nbsp;<span class="math-tex">\(x, y\)</span></em></span> and&nbsp;<span class="math-tex">\(z\)</span> axis, respectively). All sensor streams are transformed in such a way that reflects all participants wearing the smartwatch at the same hand with the same orientation, thusly achieving data uniformity. This transformation is in par with the signals in the FreeFIC dataset (information available <a href="https://zenodo.org/record/4420039">here</a> and <a href="https://mug.ee.auth.gr/free-food-intake-cycle-detection/">here</a>). Finally, the length of the raw accelerometer and gyroscope numpy.ndarrays is different <span class="math-tex"><span class="math-tex">\(N_{acc} \neq N_{gyr}\)</span></span>. This behavior is predictable and is caused by the Android/MS Band platforms. The offset key contains a float that is used to align the IMU sensor streams with the videos that were used for annotation purposes (videos are not provided).</p> <p><em>proc: </em>list<br> Each element of this list is an&nbsp;<span class="math-tex">\(M \times 7\)</span>&nbsp; numpy.ndarray that contains the timestamps, <span class="math-tex"><em><span class="math-tex">\(3D\)</span></em></span> accelerometer and&nbsp;gyroscope measurements for each meal. Specifically, the first column contains the timestamps in seconds, the second, third and forth columns contain the <span class="math-tex">\(x,y\)</span> and <span class="math-tex"><em><span class="math-tex">\(z\)</span></em></span> accelerometer values in&nbsp;<span class="math-tex"><em><span class="math-tex">\(g\)</span></em></span><strong> </strong>and the fifth, sixth and seventh columns contain the <span class="math-tex">\(x, y\)</span> and <span class="math-tex"><em><span class="math-tex">\(z\)</span></em></span> gyroscope values in <span class="math-tex"><em><span class="math-tex">\(degrees/second\)</span></em></span>. Unlike elements in the <em>raw </em>list, processed measurements (in the <em>proc</em> list) have a constant sampling rate of <span class="math-tex">100</span> Hz and the accelerometer/gyroscope measurements are aligned with each other. In addition, all sensor streams are transformed in such a way that reflects all participants wearing the smartwatch at the same hand with the same orientation, thusly achieving data uniformity. This transformation is in par with the signals in the FreeFIC dataset (information available <a href="https://zenodo.org/record/4420039">here</a> and <a href="https://mug.ee.auth.gr/free-food-intake-cycle-detection/">here</a>). <em>No other preprocessing is performed on the data</em>; e.g., the acceleration component due to the Earth&#39;s gravitational field is present at the processed acceleration measurements. The potential researcher can consult the article &quot;Modeling Wrist Micromovements to Measure In-Meal Eating Behavior from Inertial Sensor Data&quot; by Kyritsis <em>et al. </em>on how to further preprocess the IMU signals (i.e., smooth and remove the gravitational component).</p> <p><em>mm</em>: list<br> Each element of this list is a <span class="math-tex">\(K \times 3\)</span> numpy.ndarray. Each row represents a single micromovement interval. The first column contains the timestamps of the start moments in seconds, the second column the timestamps of the end moments in seconds and the third column a number representing the type of the micromovement. The identifier to micromovement mapping is provided below:<br> <span class="math-tex">\([1] \rightarrow\)</span> <strong>n</strong>o movement<br> <span class="math-tex">\([2] \rightarrow\)</span>&nbsp;<strong>u</strong>pwards<br> <span class="math-tex">\([3] \rightarrow\)</span> <strong>d</strong>ownwards<br> <span class="math-tex">\([4] \rightarrow\)</span> <strong>p</strong>ick food<br> <span class="math-tex">\([5] \rightarrow\)</span> <strong>m</strong>outh<br> <span class="math-tex">\([6] \rightarrow\)</span> <strong>o</strong>ther movement</p> <p><em>bite</em>: list<br> Each element of this list is a <strong><span class="math-tex">\(L\times2\)</span></strong> numpy.ndarray. Each row represents a single food intake event (i.e., a bite). The first column contains the start moments while the second column contains the end moments of each intake event. Both the start and end moments are provided in seconds.</p> <p><strong>Ethics and funding</strong></p> <p>Informed consent, including permission for third-party access to anonymised data, was obtained from all subjects prior to their engagement in the study. The work has received funding from the European Union&#39;s Horizon 2020 research and innovation programme under Grant Agreement No 727688 - <a href="https://bigoprogram.eu/">BigO: Big data against childhood obesity</a>.</p> <p><strong>Contact</strong></p> <p>Any inquiries regarding the FIC dataset should be addressed to:</p> <p>Dr. Konstantinos KYRITSIS</p> <p>Multimedia Understanding Group (MUG)<br> Department of Electrical &amp; Computer Engineering<br> Aristotle University of Thessaloniki<br> University Campus, Building C, 3rd floor<br> Thessaloniki, Greece, GR54124</p> <p>Tel: +30 2310 996359,&nbsp;996365&nbsp;<br> Fax: +30 2310 996398<br> E-mail: kokirits [at] mug [dot] ee [dot] auth [dot] gr</p>

opencc-by-4.0Sep 2017View details →
zenodo40/100

Figure 3 in Ecological niche differentiation among Aztec fruit-eating bat subspecies (Chiroptera: Phyllostomidae) in Mesoamerica

Figure 3. Niche overlap values for Schoener's D and Hellinger's I compared to a null distribution: (a) Artibeus a. aztecus (yellow) vs. A. a. minor (blue), (b) A. a. aztecus vs.A. A. major (red), (c) A. a. minor vs. A. a. major.

opencc-by-4.0Jan 2023View details →
zenodo40/100

Figure 2 in Ecological niche differentiation among Aztec fruit-eating bat subspecies (Chiroptera: Phyllostomidae) in Mesoamerica

Figure 2. Maxent predicted potential distribution for (a) Artibeus a. aztecus, (b) A. a. minor, and (c) A. a. major.

opencc-by-4.0Jan 2023View details →
zenodo40/100

Classification of obesity levels based on eating habits and physical condition

<p>This dataset encompasses information intended for the assessment of obesity levels among individuals in the nations of Mexico, Peru, and Colombia.</p><p>The main dataset is prepared by other authors in the article (https://doi.org/10.1016/j.dib.2019.104344) I have only used this dataset to perform my final project related to the Homework Assignment 6: Machine Learning Application in Project Dataset.&nbsp;<br>Here is some detaied explanation about the dataset:<br>&nbsp;</p><p><strong>The attributes related with eating habits are:</strong></p><ol><li>Frequent consumption of high caloric food (FAVC)</li><li>Frequency of consumption of vegetables (FCVC)</li><li>Number of main meals (NCP)</li><li>Consumption of food between meals (CAEC)</li><li>Consumption of water daily (CH20)</li><li>Consumption of alcohol (CALC)</li></ol><p><strong>The attributes related with the physical condition are:</strong></p><ol><li>Calories consumption monitoring (SCC)</li><li>Physical activity frequency (FAF)</li><li>Time using technology devices (TUE)</li><li>Transportation used (MTRANS)</li></ol><p><strong>other variables obtained were:</strong></p><ol><li>Gender</li><li>Age</li><li>Height</li><li>Weight</li><li>family history with overweight</li><li>SMOKE activity</li></ol><p>Finally, all data was labeled and the class variable NObesity was created with the values of:</p><p>a) Insufficient Weight</p><p>b) Normal Weight</p><p>c) Overweight Level I</p><p>d) Overweight Level II</p><p>e) Obesity Type I</p><p>f) Obesity Type II</p><p>g) Obesity Type III</p>

opencc-by-4.0Dec 2023View details →

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Last verified 2026-04-29Open record