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6 results for “Eurydema maracandica”
Data from: Secondary structure models of 18S and 28S rRNAs of the true bugs based on complete rDNA sequences of Eurydema maracandica Oshanin, 1871 (Heteroptera: Pentatomidae)
The sequences of 18S and 28S rDNAs have been used as molecular markers to resolve phylogenetic relationships of Heteroptera for two decades. The complete sequences of 18S rDNAs have been used in many studies, while in most studies only partial sequences of 28S rDNAs have been used due to technical difficulties of amplifying the complete lengths. In this study, we amplified the complete 18S and 28S rDNA sequences of Eurydema maracandica Oshanin, 1871, and reconstructed the secondary structure models of the corresponding rRNAs. In addition, and more importantly, all of the length variable regions of 18S rRNA were compared among 37 families of Heteroptera based on 140 sequences, and the D3 region of 28S rRNA was compared among 51 families based on 84 sequences. It was found that 8 length variable regions could potentially serve as molecular synapomorphies for some monophyletic groups. Therefore discoveries of more molecular synapomorphies for specific clades can be anticipated from amplification of complete 18S and 28S rDNAs of more representatives of Heteroptera.
Figure 3 from: Xie Q, Yu S, Wang Y, Rédei D, Bu W (2013) Secondary structure models of 18S and 28S rRNAs of the true bugs based on complete rDNA sequences of Eurydema maracandica Oshanin, 1871 (Heteroptera, Pentatomidae). ZooKeys 319: 363-377. https://doi.org/10.3897/zookeys.319.4178
Figure 3 - The 3'-half part of secondary structure model of 28S rRNA of Eurydema maracandica. The numbers D8 to D11 represent four LVRs.
Figure 4 from: Xie Q, Yu S, Wang Y, Rédei D, Bu W (2013) Secondary structure models of 18S and 28S rRNAs of the true bugs based on complete rDNA sequences of Eurydema maracandica Oshanin, 1871 (Heteroptera, Pentatomidae). ZooKeys 319: 363-377. https://doi.org/10.3897/zookeys.319.4178
Figure 4 - Secondary structure models of LVR W of Naboidea and Cimicoidea. These sequences are from 15 genera, 19 species of Naboidea and Cimicoidea. The species names and GenBank Accession numbers are as follow: Nabidae (a) Nabis ferus EF487300 (b) Nabis flavomarginatus GQ258424 (c) Himacerus apterus GQ258425; Lyctocoridae (d) Lyctocoris beneficus EF487298; Anthocoridae (e) Anthocoris sp. AY252319 (f) Anthocoris confusus EF487297 (g) Anthocoris montanus EF487307 (h) Tetraphleps aterrimus EF487295 (i) Amphiareus obscuriceps EF487301 (j) Orius agilis EF487296 (k) Physopleurella armata EF487308 (l) Montandoniola moraguesi EF487310 (m) Xylocoris cerealis GQ258395 (n) Bilia sp. GQ258406 (o) Buchananiella crassicornis GQ258407 (p) Lasiochilus japonicus GQ258410 (q) Lasiochilus luceonotatus GQ258411; Cimicidae (r) Cimex lectularius GQ258396; Curaliidae (s) Curalium cronini EU683128.
Figure 1 from: Xie Q, Yu S, Wang Y, Rédei D, Bu W (2013) Secondary structure models of 18S and 28S rRNAs of the true bugs based on complete rDNA sequences of Eurydema maracandica Oshanin, 1871 (Heteroptera, Pentatomidae). ZooKeys 319: 363-377. https://doi.org/10.3897/zookeys.319.4178
Figure 1 - Secondary structure model of 18S rRNA of Eurydema maracandica. The bases marked in black represent length-conservative regions, and the bases labeled as capital letters B to W in red represent 13 LVRs. CP and NC represent monophyletic groups Cimicomorpha+Pentatomomorpha and Naboidea+Cimicoidea, respectively. Base pairing is indicated as follows: standard canonical pairs by lines (G–C, A–U), wobble G:U pairs by dots (G·U), A:G or A:C pairs by open circles (A○G, A○C), and other non-canonical pairs by filled circles (e.g., A●A).
Figure 2 from: Xie Q, Yu S, Wang Y, Rédei D, Bu W (2013) Secondary structure models of 18S and 28S rRNAs of the true bugs based on complete rDNA sequences of Eurydema maracandica Oshanin, 1871 (Heteroptera, Pentatomidae). ZooKeys 319: 363-377. https://doi.org/10.3897/zookeys.319.4178
Figure 2 - The 5'-half part of secondary structure model of 28S rRNA of Eurydema maracandica. The numbers D2 to D7 represent six LVRs. PM, GO and AL represent monophyletic groups Paraphrynoveliidae+Macroveliidae, Gelastocoridae+Ochteridae and Acanthosomatidae+Lestoniidae, respectively.
Data from: Secondary structure models of 18S and 28S rRNAs of the true bugs based on complete rDNA sequences of Eurydema maracandica Oshanin, 1871 (Heteroptera: Pentatomidae)
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