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58 results for “Evolution: developmental”

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dryad40/100

Developmental temperature, more than long-term evolution, defines thermal tolerance in an Estuarine Copepod

<p>Climate change is resulting in increasing ocean temperatures and salinity variability, particularly in estuarine environments. Tolerance of temperature and salinity change interact and thus may impact organismal resilience. Populations can respond to multiple stressors in the short-term (i.e., plasticity) or over longer timescales (i.e., adaptation). However, little is known about the short- or long-term effects of elevated temperature on the tolerance of acute temperature and salinity changes. Here we characterized the response of the near-shore and estuarine copepod, <em>Acartia tonsa</em>, to temperature and salinity stress. Copepods originated from one of two sets of replicated &gt;40 generation-old temperature adapted lines: Ambient (AM, 18°C) and ocean warming (OW, 22°C). Copepods from these lines were subjected to one and three generations at the reciprocal temperature. Copepods from all treatments were then assessed for differences in acute temperature and salinity tolerance. Development (one generation), three generations, and &gt;40 generations of warming increased thermal tolerance compared to Ambient conditions, with development in OW resulting in equal thermal tolerance to three and &gt;40 generations of OW. Strikingly, developmental OW and &gt;40 generations of OW had no effect on low salinity tolerance relative to Ambient. By contrast, when environmental salinity was reduced first, copepods had lower thermal tolerances. These results highlight a critical role for plasticity in the copepod climate response and suggest that salinity variability may reduce copepod tolerance to subsequent warming.</p>

opencc-zeroFeb 2024View details →
zenodo40/100

Supplementary files for, 'Developmental morphology and anatomy shed light on both parallel and convergent evolution of the umbellate inflorescence in Monocots, underlied by a new variant of metatopy.'

<p>Supplementary file for forth coming manuscript. Consists of Pre-processed microscopy images, FiJI readable annotated stacks and raw laser ablation tomography video data</p> <p>&nbsp;</p> <p><strong>File name:&nbsp; </strong>MainFigures.zip&nbsp;</p> <p><strong>File format:</strong> .zip, individual images in .bmp format.</p> <p><strong>Description of data:</strong> Picolay output of main figure panels.</p> <p>&nbsp;</p> <p><strong>File name:&nbsp; </strong>Supplementary_File_1</p> <p><strong>File format:</strong> .MOV (video)</p> <p><strong>Description of data:</strong> Movie 1 LAT scan of <em>Butomus umbellatus</em></p> <p>&nbsp;</p> <p><strong>File name:&nbsp; </strong>Supplementary_File_2</p> <p><strong>File format:</strong> .AVI (video)</p> <p><strong>Description of data:</strong> Three-dimensional reconstruction of <em>Butomus umbellatus</em> inflorescence</p> <p>&nbsp;</p> <p><strong>File name:&nbsp; </strong>Supplementary_File_3</p> <p><strong>File format:</strong> .MOV (video)</p> <p><strong>Description of data:</strong> Movie 3 Three-dimensional reconstruction of <em>Butomus umbellatus</em> vasculature</p> <p>&nbsp;</p> <p><strong>File name:&nbsp; </strong>Supplementary_File_4</p> <p><strong>File format:</strong> .TIFF (Can be opened in FIJI)</p> <p><strong>Description of data:</strong> <em>Butomus</em> <em>umbellatus </em>vasculature composite tiff file</p> <p>&nbsp;</p> <p><strong>File name:&nbsp; </strong>Supplementary_File_5</p> <p><strong>File format:</strong> .MOV (video)</p> <p><strong>Description of data:</strong> LAT scan of O<em>rnithogalum umbellatum</em></p> <p>&nbsp;</p> <p><strong>File name:&nbsp; </strong>Supplementary_File_6</p> <p><strong>File format:</strong> .TIFF (Can be opened in FIJI)</p> <p><strong>Description of data:</strong> <em>Ornithogalum umbellatum</em> vasculature tiff file (Can be opened in FIJI)</p> <p>&nbsp;</p> <p><strong>File name:&nbsp;</strong>Supplementary_File_7</p> <p><strong>File format:</strong> .MOV (video)</p> <p><strong>Description of data:</strong> LAT scan of <em>Allium hollandicum</em> inflorescence</p>

opencc-by-4.0Apr 2022View details →
zenodo40/100

Host developmental stages shape the evolution of a plant RNA virus

<p>Datasets used in the generation of figures 1 and 2 of:</p> <p>Melero, I., Gonz&aacute;lez, R., Elena, S.F. 2022. Host developmental stages shape the evolution of a plant RNA Virus. Philos. Trans. R. Soc. B doi: 10.1098/rtsb.2022.0005</p>

opencc-by-4.0Aug 2022View details →
dryad40/100

Developmental bias in the evolution and plasticity of beetle horn shape

<p>The degree to which developmental systems bias the phenotypic effects of environmental and genetic variation, and how these biases affect evolution, is subject to much debate. Here, we assess whether developmental variability in horn shape aligns with the phenotypic effects of plasticity and evolutionary divergence, yielding three salient results. First, we find that most pathways previously shown to regulate horn length also affect shape. Second, we find that the phenotypic effects of manipulating divergent developmental pathways are correlated with each other as well as multivariate fluctuating asymmetry – a measure of developmental variability. Third, these effects further aligned with thermal plasticity, population differences, and macroevolutionary divergence between sister taxa and more distantly related species. Collectively, our results support the hypothesis that changes in horn shape —whether brought about by environmentally plastic responses, functional manipulations, or evolutionary divergences— converge along 'developmental lines of least resistance', i.e., are biased by the developmental system underpinning horn shape.</p>

opencc-zeroOct 2022View details →
zenodo40/100

Figure 1 in Life history dynamics and biogeography of a nudibranch with contrasting developmental modes: A hypothesis for the evolution of larval types

Figure 1. Map of the lower Gulf of Maine with the distribution of Dendronotus frondosus and Dendronotus sp. from subtidal and intertidal habitats near the coasts of Maine (ME) and New Hampshire (NH), USA and New Brunswick (NB) and Nova Scotia (NS), Canada. See Table I to reference site numbers and Cartesian coordinates. Sites for seasonal monitoring of hydroid and nudibranch abundance include York (2), West Quoddy Head (12) and Eastport (13), Maine.

opencc-by-4.0Sep 2005View details →
zenodo40/100

Figure 5 in Life history dynamics and biogeography of a nudibranch with contrasting developmental modes: A hypothesis for the evolution of larval types

Figure 5. Summary of the larval dispersal potential of Dendronotus frondosus and Dendronotus sp. in laboratory cultures at 10°C (Sisson 2002b, 2004). The ''egg-to-juvenile'' period lasts from spawn deposition through larval settlement and metamorphosis.

opencc-by-4.0Sep 2005View details →
zenodo40/100

Figure 3 in Life history dynamics and biogeography of a nudibranch with contrasting developmental modes: A hypothesis for the evolution of larval types

Figure 3. Abundance of spawn masses deposited by Dendronotus spp. at: (a) York, Maine, (b) Eastport, Maine and (c) the intertidal site at West Quoddy Head, Lubec, Maine.

opencc-by-4.0Sep 2005View details →
zenodo40/100

Figure 4 in Life history dynamics and biogeography of a nudibranch with contrasting developmental modes: A hypothesis for the evolution of larval types

Figure 4. Weekly mean (¡SD), minimum and maximum water temperature (in °C) at the subtidal sampling sites in York and Eastport, Maine.

opencc-by-4.0Sep 2005View details →
zenodo40/100

Figure 3 in Cracking a Developmental Constraint: Egg Size and Bird Evolution

Figure 3. Relationship between egg weight and female body weight in extant birds. (A) Graph to discriminate between altricial [n = 96; filled circles; r2 = 0.906, p &lt;0.001; egg mass = –0.659394 + 0.7889097.bodymass], and precocial [n = 113; open circles] (including super precocial [n = 29; grey triangles]; r2 = 0.801, p &lt;0.001; egg mass = –0.164615 + 0.6451872.bodymass) taxa. Both of these results have significantly higher r2 values than those found for 100 bootstrap replicates that paired body and egg mass at random. (B) Bar chart showing that the three broad developmental modes seen in Neornithes are characterized by significantly different egg/female body mass relationships. Discrimination among all three groups is borne out by averaged data (Kruskal-Wallis test, p &lt;0.005). Abbreviations: A, altricial; P, Precocial; SP, super precocial.

opencc-by-4.0May 2010View details →
zenodo40/100

Figure 2 in Cracking a Developmental Constraint: Egg Size and Bird Evolution

Figure 2. Phylogenetic hypothesis for relationships amongst modern birds (Neornithes) showing altricial

opencc-by-4.0May 2010View details →
zenodo40/100

Figure 4 in Cracking a Developmental Constraint: Egg Size and Bird Evolution

Figure 4. Relationship between femur length (approximates body mass) and egg mass in extant and fossil birds (n = 117; r2 = 0.758, p &lt;0.001). These data show that both Confuciusornis (cartoon, open circle) and the similarly-sized Buttonquail (Turnix) (grey triangle) lay relatively small eggs compared to their body size (Appendix).

opencc-by-4.0May 2010View details →
dryad40/100

Data from: How important are functional and developmental constraints on phenotypic evolution? An empirical test with the stomatal anatomy of flowering plants

<p>Quantifying the relative contribution of functional and developmental constraints on phenotypic variation is a longstanding goal of macroevolution, but it is often difficult to distinguish different types of constraints. Alternatively, selection can limit phenotypic (co)variation if some trait combinations are generally maladaptive. The anatomy of leaves with stomata on both surfaces (amphistomatous) presents a unique opportunity to test the importance of functional and developmental constraints on phenotypyic evolution. The key insight is that stomata on each leaf surface encounter the same functional and developmental constraints, but potentially different selective pressures because of leaf asymmetry in light capture, gas exchange, and other features. Independent evolution of stomatal traits on each surface implies that functional and developmental constraints alone likely do not explain trait covariance. Packing limits on how many stomata can fit into a finite epidermis and cell-size-mediated developmental integration are hypothesized to constrain variation in stomatal anatomy. The simple geometry of the planar leaf surface and knowledge of stomatal development makes it possible to derive equations for phenotypic (co)variance caused by these constraints and compare them with data. We analyzed evolutionary covariance between stomatal density and length in amphistomatous leaves from 236 phylogenetically independent contrasts using a robust Bayesian model. Stomatal anatomy on each surface diverges partially independently, meaning that packing limits and developmental integration are not sufficient to explain phenotypic (co)variation. Hence, (co)variation in ecologically important traits like stomata arises in part because there is a limited range of evolutionary optima. We show how it is possible to evaluate the contribution of different constraints by deriving expected patterns of (co)variance and testing them using similar but separate tissues, organs, or sexes.</p>

opencc-zeroApr 2023View details →
dryad40/100

Microbes as manipulators of egg size and developmental evolution

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publicApr 2025View details →
dryad40/100

Data from: How important are functional and developmental constraints on phenotypic evolution? An empirical test with the stomatal anatomy of flowering plants

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publicOct 2023View details →
dryad40/100

Comparison of thermal developmental plasticity among seven recently sympatric <i>Anolis</i> species: insights into the evolution of reaction norms

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publicOct 2025View details →
dryad40/100

Developmental bias in the evolution and plasticity of beetle horn shape

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publicOct 2022View details →
dryad40/100

Developmental temperature, more than long-term evolution, defines thermal tolerance in an Estuarine Copepod

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publicFeb 2024View details →
dryad36/100

Developmental life history is associated with variation in rates of climatic niche evolution in a salamander adaptive radiation

Rates of climatic niche evolution vary widely across the tree of life and are strongly associated with rates of diversification and the accumulation of species diversity among clades. However, why the climatic niche evolves more rapidly in some lineages than others remains unclear. Variation in life history traits often plays a key role in determining the environmental conditions under which species can survive, and therefore, could impact the rate at which lineages can expand in available climatic niche space. Here, we explore the relationships among life-history variation, climatic niche breadth, and rates of climatic niche evolution. We reconstruct a new phylogeny for the genus Desmognathus, an adaptive radiation of salamanders distributed across eastern North America, based on nuclear and mitochondrial genes. Using this phylogeny, we estimate rates of climatic niche evolution for species with long, short, and no aquatic larval stage. Rates of climatic niche evolution are unrelated to the mean climatic niche breadth of species with different life histories. Instead, we find that the evolution of a short larval period promotes greater exploration of climatic space, leading to increased rates of climatic niche evolution across species having this trait. We propose that morphological and physiological differences associated with variation in larval stage length underlie the heterogeneous ability of lineages to explore climatic niche space. Rapid rates of climatic niche evolution among lineages with short larval periods were an important dimension of the clade's adaptive radiation and likely contributed to the rapid rate of lineage accumulation following the evolution of an aquatic life history in this clade. Our results show how variation in a key life-history trait can constrain or promote divergence of the climatic niche, leading to variation in rates of climatic niche evolution among lineages.

opencc-zeroMar 2020View details →
zenodo36/100

Data from: Diversity and molecular evolution of non-visual opsin genes across environmental, developmental, and morphological adaptations in frogs

<p>Dataset for the article Diversity and molecular evolution of non-visual opsin genes across environmental, developmental, and morphological adaptations in frogs. Includes non-visual opsin coding sequences from frogs, sequence alingments, phylogenetics trees, and raw PAML results files.</p>

opencc-by-4.0Mar 2024View details →
zenodo36/100

Figure 1 in Cracking a Developmental Constraint: Egg Size and Bird Evolution

Figure 1. Cartoon to show a simplified consensus phylogeny of Mesozoic birds.

opencc-by-4.0May 2010View details →

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Allen Brain Atlas

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allen-brain-atlas
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Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record