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89 results for “FRAGMENT ANALYSIS”
PanDDA analysis of BRD1 screened against 3D-Fragment-Consortium Fragment Library (HTML Summary)
<p>Interactive summary page for "PanDDA analysis of BRD1 screened against 3D-Fragment-Consortium Fragment Library".</p> <p><strong>Please click on "0_index.html" in the "Files" section to open the interactive summary.</strong></p> <p>All datasets are also available as combined zip files from https://zenodo.org/record/48769 .</p> <p> </p>
PanDDA analysis of JMJD2D screened against Zenobia Fragment Library (HTML Summary)
<p>Interactive summary page for "PanDDA analysis of JMJD2D screened against Zenobia Fragment Library".</p> <p><strong>Please click on "0_index.html" in the "Files" section to open the interactive summary.</strong></p> <p>All datasets are also available as combined zip files from https://zenodo.org/record/48770 .</p>
PanDDA analysis of SP100 screened against selection of Maybridge Fragment Library (HTML Summary)
<p>Interactive summary page for "PanDDA analysis of SP100 screened against selection of Maybridge Fragment Library".</p> <p><strong>Please click on "0_index.html" in the "Files" section to open the interactive summary.</strong></p> <p>All datasets are also available as combined zip files from https://zenodo.org/record/48771 .</p>
PanDDA analysis of BAZ2B screened against Zenobia Fragment Library (HTML Summary)
<p>Interactive summary page for "PanDDA analysis of BAZ2B screened against Zenobia Fragment Library".</p> <p><strong>Please click on "0_index.html" in the "Files" section to open the interactive summary.</strong></p> <p>All datasets are also available as combined zip files from https://zenodo.org/record/48768 .</p>
PanDDA analysis of PTP1B screened against fragment libraries
<p>Tyrosine phosphatase, PTP1B, screened against multiple fragment libraries via X-ray crystallography.</p>
Рис. 1. ФиΛогенетические Αеревья хантавируса AMRV и его прироΑного носитеΛя восточноазиатской мыши Apodemus peninsulae Thomas, 1906. А. ФиΛогенетическое Αерево восточноазиатской мыши Apodemus peninsulae, построенное метоΑом «максимаΛьного правΑопоΑобия» (ML) и поΛученное на основе анаΛиза участка гена цитохрома b мтΔНК (744 п.н.). В узΛах ветвΛения указаны бутстреп-поΑΑержки, рассчитанные ΑΛя 1000 повторов. Цветными Λиниями обозначены фиΛогенетические Λинии: Αве Китайские (зеΛеный), Корейская «Korea» (синий), Амурская «Amur» (красный). ПоΛужирным шрифтом выΑеΛены собственные образцы. Названия образцов из GenBank/NCBI быΛи сокращены; B. ФиΛогенетическое Αерево из работы Α. Н. Яшиной с ΑопоΛнениями, построенное метоΑом «бΛижайшего сосеΑа» (NJ) на основе посΛеΑоватеΛьностей фрагмента М-сегмента (2737–2980 н.п.) генома хантавирусов. В узΛах ветвΛения указаны бутстреппоΑΑержки, рассчитанные ΑΛя 1000 повторов. Жирным выΑеΛены иссΛеΑованные РНК изоΛяты (Яшина 2012; Яшина и Αр. 2019) Fig. 1. Phylogenetic trees of AMRV and its natural reservoir host — the Korean field mouse Apodemus peninsulae Thomas, 1906. A. Phylogenetic tree of the Korean field mouse Apodemus peninsulae constructed by the "maximum likelihood" method (ML). The data are obtained from the analysis of the cytochrome b mtDNA gene fragments (744 bp). Bootstrap supports calculated for 1,000 repeats are indicated in the branching nodes. Colored lines indicate phylogenetic lines: two Chinese (green), Korea (blue), and Amur (red). Own samples are highlighted in bold. The names of the samples from GenBank/NCBI have been shortened; B. Phylogenetic tree from L. N. Yashina's work with additions constructed by the neighbour joining method (NJ). It is based on the sequences of an M-segment fragment (2737–2980 bp) of the hantavirus genome. Bootstrap supports calculated for 1,000 repeats are indicated in the branching nodes. The researched RNA isolates are highlighted in bold (Yashina 2012; Yashina et al. 2019) in Variability of the gene cyt b in the Korean field mouse Apodemus peninsulae Thomas, 1906 - a reservoir host of AMRV in the Khasansky District of Primorsky Krai
Рис. 1. ФиΛогенетические Αеревья хантавируса AMRV и его прироΑного носитеΛя восточноазиатской мыши Apodemus peninsulae Thomas, 1906. А. ФиΛогенетическое Αерево восточноазиатской мыши Apodemus peninsulae, построенное метоΑом «максимаΛьного правΑопоΑобия» (ML) и поΛученное на основе анаΛиза участка гена цитохрома b мтΔНК (744 п.н.). В узΛах ветвΛения указаны бутстреп-поΑΑержки, рассчитанные ΑΛя 1000 повторов. Цветными Λиниями обозначены фиΛогенетические Λинии: Αве Китайские (зеΛеный), Корейская «Korea» (синий), Амурская «Amur» (красный). ПоΛужирным шрифтом выΑеΛены собственные образцы. Названия образцов из GenBank/NCBI быΛи сокращены; B. ФиΛогенетическое Αерево из работы Α. Н. Яшиной с ΑопоΛнениями, построенное метоΑом «бΛижайшего сосеΑа» (NJ) на основе посΛеΑоватеΛьностей фрагмента М-сегмента (2737–2980 н.п.) генома хантавирусов. В узΛах ветвΛения указаны бутстреппоΑΑержки, рассчитанные ΑΛя 1000 повторов. Жирным выΑеΛены иссΛеΑованные РНК изоΛяты (Яшина 2012; Яшина и Αр. 2019) Fig. 1. Phylogenetic trees of AMRV and its natural reservoir host — the Korean field mouse Apodemus peninsulae Thomas, 1906. A. Phylogenetic tree of the Korean field mouse Apodemus peninsulae constructed by the "maximum likelihood" method (ML). The data are obtained from the analysis of the cytochrome b mtDNA gene fragments (744 bp). Bootstrap supports calculated for 1,000 repeats are indicated in the branching nodes. Colored lines indicate phylogenetic lines: two Chinese (green), Korea (blue), and Amur (red). Own samples are highlighted in bold. The names of the samples from GenBank/NCBI have been shortened; B. Phylogenetic tree from L. N. Yashina's work with additions constructed by the neighbour joining method (NJ). It is based on the sequences of an M-segment fragment (2737–2980 bp) of the hantavirus genome. Bootstrap supports calculated for 1,000 repeats are indicated in the branching nodes. The researched RNA isolates are highlighted in bold (Yashina 2012; Yashina et al. 2019)
ENTICE VM image analysis and optimised fragmentation frequently built images dataset
<p>As part of the evaluation of ENTICE VM image analysis and optimised fragmentation services we have implemented a simulation environment which analyses online software package repositories (e.g. ones offered by the maintainers of the Ubuntu and Debian Linux distributions) and deduces decomposition options as well as expected fragment sizes based on metadata acquired from these repositories. This dataset contains the collected recipes for several frequently built Ubuntu Linux based VMIs (e.g., LAMP, LAPP, LEMP, LLMP, LYME, MEAN/MERN, LTM, etc.) and the calculated fragments and their relations. The dataset is used to analyse and evaluate the behaviour of the fragmentation services. The dataset is in compressed LRZIP format.</p>
Text-fig. 2. Taphonomic and pathological phenomena of bear bones from Middle Pleistocene deposits from Vykopaná chodba in Za Hájovnou Cave (Moravia, the Czech Republic). a – fragment of left mandibula with pathological condylar process; b – thoracic vertebra with pathological rib facet; c – Mc III dext. with exostoses; d – fragment of juvenile right ulna with bite marks; e – gnawed right tibia with bite marks on proximal part; f – gnawed left calcaneus with bite marks. in Basic Population And Taphonomic Analysis Of Bear Assemblages From Za Hájovnou Cave (Moravia, The Czech Republic): A Fossil Record From 1987-2007
Text-fig. 2. Taphonomic and pathological phenomena of bear bones from Middle Pleistocene deposits from Vykopaná chodba in Za Hájovnou Cave (Moravia, the Czech Republic). a – fragment of left mandibula with pathological condylar process; b – thoracic vertebra with pathological rib facet; c – Mc III dext. with exostoses; d – fragment of juvenile right ulna with bite marks; e – gnawed right tibia with bite marks on proximal part; f – gnawed left calcaneus with bite marks.
Text-fig. 3. Taphonomic and pathological phenomena of bear bones from Middle Pleistocene deposits from Chodba naděje in Za Hájovnou Cave (Moravia, the Czech Republic). a – gnawed lumbar vertebra with a bite mark on the body head; b – fragment of pelvis with a bite mark; c – femur head with a bite mark; d – Mc II dext. with a pathological phenomenon on the metapodial proximal part (tuberosity/exostosis?). in Basic Population And Taphonomic Analysis Of Bear Assemblages From Za Hájovnou Cave (Moravia, The Czech Republic): A Fossil Record From 1987-2007
Text-fig. 3. Taphonomic and pathological phenomena of bear bones from Middle Pleistocene deposits from Chodba naděje in Za Hájovnou Cave (Moravia, the Czech Republic). a – gnawed lumbar vertebra with a bite mark on the body head; b – fragment of pelvis with a bite mark; c – femur head with a bite mark; d – Mc II dext. with a pathological phenomenon on the metapodial proximal part (tuberosity/exostosis?).
Figure 1 in Faunistic analysis of fruit flies (Diptera: Tephritidae) in a guava orchard and semideciduous forest fragment in Central-West Region of Brazil
Figure 1. Number of female specimens of the six more abundant species (top) and seven less abundant species (bottom) of fruit flies caught with McPhail traps, in a fragment of semideciduous forest, and in a commercial orchard of guava in Itaporã, MS, Brazil, from 2008 to 2009.
UniSpec: Deep Learning for Predicting the Full Range of Peptide Fragment Ion Series to Enhance the Proteomics Data Analysis Workflow
<p>UniSpec is a comprehensive DL spectrum predictor that can predict the intensity of the entire HCD MS/MS fragment ion series, going beyond existing tools limited to b/y ion series. </p> <p>All datasets developed for UniSpec model are shared on Zenodo as part of the UniSpec publication, "UniSpec: Deep Learning for Predicting Comprehensive Peptide Fragment Ion Series to Improve Peptide-Spectrum Matches from Shotgun Proteomics Experiments".</p> <p>This includes UniSpec datasets, downstream evaluation and analysis, and application case studies.</p> <p>1. pre-processed training, evaluation and testing data for machine learning;</p> <p> UniSpec-Datasets.7z, Readme_UniSpecDatasets.txt</p> <p>2. Streamlined input datasets based on the fragmentation dictionary;</p> <p> Streamlined_inputdatasets.7z, Readme_Streamlined_inputdatasets.txt</p> <p>3. Predictions on the validation and test sets;</p> <p> UniSpecPred_Validation-Test.7z, Readme_Predictons_ValidationTest.txt</p> <p>4. Evaluation by comparison with Prosit;</p> <p> a. Predictions: prosit_and_unispec_predictions.7z, Readme_prosit_and_unispec_predictions.txt</p> <p> b. Cosine similarity scores: prosit_vs_unispec_CS.7z, Readme_prosit_vs_unispec_CS.txt</p> <p>5. CSS for Different HCD Fragment Ion Series;</p> <p> CS_for_ion_splits.tsv</p> <p>6. Application 1: PSM rescoring;</p> <p> PSM rescoring_zipfiles.7z, PSM rescoring_readme.txt</p> <p>7. Application 2: In-silico spectral library search </p> <p> in-silico_librarysearch.7z, in-silico_librarysearch_readme.txt</p> <p> </p>
Fig. 2. Principal Component Analysis plot showing the 42 in Evidence of genetic connectivity between fragmented pig populations in a tropical urban city-state
Fig. 2. Principal Component Analysis plot showing the 42 individuals from the Central Catchment Nature Reserve (CCNR) and the Northeast differentiated by sex and age class. Individuals exhibiting genetic admixture are labelled. Percentage variation accounted for by each principal component is indicated in brackets.
Fig. S1. Principal Component Analysis plot showing 28 in Evidence of genetic connectivity between fragmented pig populations in a tropical urban city-state
Fig. S1. Principal Component Analysis plot showing 28 out of 42 individuals from the Central Catchment Nature Reserve (CCNR) and the Northeast with kinship values <0.2. Individuals are differentiated by sex and age class. Individuals exhibiting genetic admixture are labelled. Percentage variation accounted for by each principal component is indicated in brackets.
Text-fig. 45. Scanning electron microscope (SEM) images of monocolpate pollen of Dinisia portugallica gen. et sp. nov. from a fragmentary stamen; Torres Vedras locality, Portugal. a) Holotype; stamen fragment showing elongated pollen sacs that yielded the pollen in this Text-figure; b) Two pollen grains showing poorly defined distal aperture (arrowhead) and distinctive vermiform reticulum forming luminae of variable shapes and sizes; note especially the irregularly and incomplete reticulum in the grain on the left; c) Reticulum showing smooth, vermiform muri attached to the smooth surface of the foot layer by long columellae; note that columellae often terminate segments of muri that are not closed; d, e) Pollen grains showing proximal surface (d), poorly defined distal aperture (e, arrowhead) and distinctive vermiform reticulum supported by long columellae; note dense covering of small, spherical orbicules on the inner surface of the anther wall. Specimen, TV44-S148216 (holotype). Scale bars 300 Μm (a), 6 Μm (b, d, e), 3 Μm (c). in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 45. Scanning electron microscope (SEM) images of monocolpate pollen of Dinisia portugallica gen. et sp. nov. from a fragmentary stamen; Torres Vedras locality, Portugal. a) Holotype; stamen fragment showing elongated pollen sacs that yielded the pollen in this Text-figure; b) Two pollen grains showing poorly defined distal aperture (arrowhead) and distinctive vermiform reticulum forming luminae of variable shapes and sizes; note especially the irregularly and incomplete reticulum in the grain on the left; c) Reticulum showing smooth, vermiform muri attached to the smooth surface of the foot layer by long columellae; note that columellae often terminate segments of muri that are not closed; d, e) Pollen grains showing proximal surface (d), poorly defined distal aperture (e, arrowhead) and distinctive vermiform reticulum supported by long columellae; note dense covering of small, spherical orbicules on the inner surface of the anther wall. Specimen, TV44-S148216 (holotype). Scale bars 300 Μm (a), 6 Μm (b, d, e), 3 Μm (c).
Text-fig. 43. Scanning electron microscope (SEM) images of monocolpate pollen of Kempia longicolpites gen. et sp. nov. from a fragmentary stamen; Torres Vedras locality, Portugal. a) Holotype; stamen fragment showing elongated pollen sacs that yielded the pollen in this Text-figure; b) Pollen grains showing the very long distal aperture and loosely attached reticulum; c, d) Pollen grains showing the very long, clearly defined distal aperture that extends around the ends of the grain; e) Reticulum in nonapertural region showing the smooth muri loosely attached to the smooth surface of the foot layer by short columellae; f) Internal view of reticulum showing the short columellae loosened from the foot layer. Specimen, TV44-S105018 (holotype). Scale bars 300 Μm (a), 30 Μm (b), 6 Μm (c, d), 3 Μm (e, f). in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 43. Scanning electron microscope (SEM) images of monocolpate pollen of Kempia longicolpites gen. et sp. nov. from a fragmentary stamen; Torres Vedras locality, Portugal. a) Holotype; stamen fragment showing elongated pollen sacs that yielded the pollen in this Text-figure; b) Pollen grains showing the very long distal aperture and loosely attached reticulum; c, d) Pollen grains showing the very long, clearly defined distal aperture that extends around the ends of the grain; e) Reticulum in nonapertural region showing the smooth muri loosely attached to the smooth surface of the foot layer by short columellae; f) Internal view of reticulum showing the short columellae loosened from the foot layer. Specimen, TV44-S105018 (holotype). Scale bars 300 Μm (a), 30 Μm (b), 6 Μm (c, d), 3 Μm (e, f).
Text-fig. 46. Scanning electron microscope (SEM) images of monocolpate pollen of Teebacia hughesii gen. et sp. nov. pollen from a stamen fragment; Torres Vedras locality, Portugal. a) Holotype; stamen fragment showing elongated pollen sacs that yielded the pollen in this Text-figure (d, e); b) Detail of detached reticulum showing inner surface of muri and scattered columellae; note the finely granular covering of the muri and columellae; c, d) Detail of reticulum showing the outer surface of muri with supratectal ornamentation of narrow ridges; note orbicules attached to the reticulum (d); e, f) Pollen grains showing loose, beaded, reticulum with long columellae; note continuous muri bordering the apertures and densely spaced minute orbicules lining the inner surface of the anther wall (e, arrowheads). Specimens, TV44-S136666 (holotype; a, d, e), TV44-S149207 (b, c, f). Scale bars 300 Μm (a), 6 Μm (e, f), 3 Μm (b), 1.5 Μm (c), 1.2 Μm (d). in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 46. Scanning electron microscope (SEM) images of monocolpate pollen of Teebacia hughesii gen. et sp. nov. pollen from a stamen fragment; Torres Vedras locality, Portugal. a) Holotype; stamen fragment showing elongated pollen sacs that yielded the pollen in this Text-figure (d, e); b) Detail of detached reticulum showing inner surface of muri and scattered columellae; note the finely granular covering of the muri and columellae; c, d) Detail of reticulum showing the outer surface of muri with supratectal ornamentation of narrow ridges; note orbicules attached to the reticulum (d); e, f) Pollen grains showing loose, beaded, reticulum with long columellae; note continuous muri bordering the apertures and densely spaced minute orbicules lining the inner surface of the anther wall (e, arrowheads). Specimens, TV44-S136666 (holotype; a, d, e), TV44-S149207 (b, c, f). Scale bars 300 Μm (a), 6 Μm (e, f), 3 Μm (b), 1.5 Μm (c), 1.2 Μm (d).
Text-fig. 44. Scanning electron microscope (SEM) images of monocolpate pollen of Juhaszia portugallica gen. et sp. nov. from a fragment of a pollen sac (a–e) and stamen fragment and pollen of Dictyozonia pusilla gen. et sp. nov. (f–k); Torres Vedras locality, Portugal. a) Holotype; fragment of pollen sac that yielded the pollen in (b–e); b) Proximal surface of pollen grain showing reticulate sculpture in the equatorial regions grading into more a continuous foveolate tectum at the proximal pole; c) Reticulum on the proximal surface showing smooth muri delimiting large and small luminae. Muri supported by numerous short columellae that are only loosely attached to the smooth surface of the foot layer; d) Distal surface of pollen grain showing the long colpus and reticulate sculpture with a distinctive pattern of large and small luminae; e) Pollen grain from which the reticulum has become in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 44. Scanning electron microscope (SEM) images of monocolpate pollen of Juhaszia portugallica gen. et sp. nov. from a fragment of a pollen sac (a–e) and stamen fragment and pollen of Dictyozonia pusilla gen. et sp. nov. (f–k); Torres Vedras locality, Portugal. a) Holotype; fragment of pollen sac that yielded the pollen in (b–e); b) Proximal surface of pollen grain showing reticulate sculpture in the equatorial regions grading into more a continuous foveolate tectum at the proximal pole; c) Reticulum on the proximal surface showing smooth muri delimiting large and small luminae. Muri supported by numerous short columellae that are only loosely attached to the smooth surface of the foot layer; d) Distal surface of pollen grain showing the long colpus and reticulate sculpture with a distinctive pattern of large and small luminae; e) Pollen grain from which the reticulum has become
Text-fig. 37. Scanning electron microscope (SEM) images of anthers and monocolpate pollen of Eckhartia brevicolumella gen. et sp. nov. from stamen fragment; Torres Vedras locality, Portugal. a) Dithecate, tetrasporangiate anther partially split along the elongated sporangia; b) Dithecate, tetrasporangiate anther; c) Holotype; distal view of pollen grain from holotype showing the long colpus with a distinct margin and a heterobrochate reticulum; d) Distal view of pollen grain from a stamen fragment showing long colpus, colpus margin and heterobrochate reticulum; e) Inner surface of anther wall from stamen fragment showing densely spaced dentate orbicules; f) Lateral view of pollen grains from stamen showing the psilate to foveolate-microreticulate colpus margin; g) Detail of pollen grain from holotype showing the slightly rounded profile of the muri, the short, densely spaced columellae and the dentate orbicules. Specimens, TV44-S136662 (a), TV44-S149204 (b), TV44-S136760 (holotype; c, g), TV44-S148021 (d, e), TV44-S136752 (f). Scale bars 300 Μm (a, b), 6 Μm (c, d, f), 3 Μm (e, g). in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 37. Scanning electron microscope (SEM) images of anthers and monocolpate pollen of Eckhartia brevicolumella gen. et sp. nov. from stamen fragment; Torres Vedras locality, Portugal. a) Dithecate, tetrasporangiate anther partially split along the elongated sporangia; b) Dithecate, tetrasporangiate anther; c) Holotype; distal view of pollen grain from holotype showing the long colpus with a distinct margin and a heterobrochate reticulum; d) Distal view of pollen grain from a stamen fragment showing long colpus, colpus margin and heterobrochate reticulum; e) Inner surface of anther wall from stamen fragment showing densely spaced dentate orbicules; f) Lateral view of pollen grains from stamen showing the psilate to foveolate-microreticulate colpus margin; g) Detail of pollen grain from holotype showing the slightly rounded profile of the muri, the short, densely spaced columellae and the dentate orbicules. Specimens, TV44-S136662 (a), TV44-S149204 (b), TV44-S136760 (holotype; c, g), TV44-S148021 (d, e), TV44-S136752 (f). Scale bars 300 Μm (a, b), 6 Μm (c, d, f), 3 Μm (e, g).
Text-fig. 56. Number of specimens and number of species for the four major plant groups recovered in the Torres Vedras mesofossil flora. Unidentified specimens such as seed fragments, stamen fragments without pollen grains, coprolites without recognizable plant fragments and strongly distorted specimens are not included in this overview. in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 56. Number of specimens and number of species for the four major plant groups recovered in the Torres Vedras mesofossil flora. Unidentified specimens such as seed fragments, stamen fragments without pollen grains, coprolites without recognizable plant fragments and strongly distorted specimens are not included in this overview.
Text-fig. 34. Scanning electron microscope (SEM) images of monocolpate pollen of Mayoa portugallica from a fragmentary stamen; Torres Vedras locality, Portugal. a) Stamen fragment that yielded the pollen in this Text-figure; b–d) Pollen grains showing the distinctive perpendicular orientation of two broad bands of striae that converge at the ends of the grains. Specimen, TV44-S136663. Scale bars 150 Μm (a), 6 Μm (b, c), 3 Μm (d). in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 34. Scanning electron microscope (SEM) images of monocolpate pollen of Mayoa portugallica from a fragmentary stamen; Torres Vedras locality, Portugal. a) Stamen fragment that yielded the pollen in this Text-figure; b–d) Pollen grains showing the distinctive perpendicular orientation of two broad bands of striae that converge at the ends of the grains. Specimen, TV44-S136663. Scale bars 150 Μm (a), 6 Μm (b, c), 3 Μm (d).
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.