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652 results for “H3K27me3”
Hacat H3K4me3, H3K27me3 and Input bed files
<p>Cite </p> <p>https://academic.oup.com/nar/article/41/5/2846/2414471</p> <p>Aligned with: hisat2 --threads 24 -x /mnt/cargo/genomes/hisat2/hg38/genome --no-spliced-alignment -k 1 --no-discordant --no-mixed -U Satrom-chIP-05-Input_TGACCA_L002_R1_001.fastq</p> <p> </p>
Data from: Nerve-dependent regulation of H3K27me3 during the induction of patterning competency in regenerating axolotl limb cells
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Plant ADH1 promoter acts as an H3K27me3-associated hyper-long cold-responsive promoter
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Data from: Cdk8 is required for establishment of H3K27me3 and gene repression by Xist and mouse development
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DOHH2 hg38 H3K27me3 ChIP-seq Dataset filtered for Unique Multiread Mappability
<p>hg38 DOHH2 H3K27me3 ChIP-seq Dataset filtered for Unique Multiread Mappability at a threshold of .75 using Umap</p>
Optimizing methodology for the detection of H3K27me3 levels using flow cytometry
<p>Optimizing methods to detect H3K27m3 levels using flow cytometry in patient AML cells.</p>
Analysis of opposing histone modifications H3K4me3 and H3K27me3 reveals candidate diagnostic biomarkers for triple negative breast cancer and gene set prediction combinations
<p>Supplementary data of manuscript <strong>'Analysis of opposing histone modifications H3K4me3 and H3K27me3 reveals candidate diagnostic biomarkers for triple negative breast cancer and gene set prediction combinations </strong><strong>Analysis of opposing histone modifications H3K4me3 and H3K27me3 reveals candidate diagnostic biomarkers for triple negative breast cancer and gene set prediction combinations'</strong></p>
Data from: Placental H3K27me3 establishes female resilience to prenatal insults
Although sex biases in disease presentation are well documented, the mechanisms mediating vulnerability or resilience to diseases are unknown. In utero insults are more likely to produce detrimental health outcomes for males versus females. In our mouse model of prenatal stress, male offspring experience long-term dysregulation of body weight and hypothalamic pituitary adrenal stress axis dysfunction, endophenotypes of male-biased neurodevelopmental disorders. Placental function is critical for healthy fetal development, and we previously showed that sex differences in placental O-linked N-acetylglucosamine transferase (OGT) mediate the effects of prenatal stress on neurodevelopmental programming. Here we show that one mechanism whereby sex differences in OGT confer variation in vulnerability to prenatal insults is by establishing sex-specific trophoblast gene expression patterns and via regulation of the canonically repressive epigenetic modification, H3K27me3. We demonstrate that high levels of H3K27me3 in the female placenta create resilience to the altered hypothalamic programming associated with prenatal stress exposure.
Genome-wide profiling of histone H3K4me3 and H3K27me3 modifications in individual bovine blastocysts by NTU-CAT
<p>BAM and corresponding BW files generated by NON-TiE-UP CUT&Tag (NTU-CAT).</p>
Data from: Placental H3K27me3 establishes female resilience to prenatal insults
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Data from: Reciprocal changes of H3K27ac and H3K27me3 at the promoter regions of the critical genes for endometrial decidualization
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modENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.pse_E0-4h on Illumina Genome Analyzer.
GEO Series GSE25665. Drosophila pseudoobscura. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Linker histone H1.2 establishes chromatin comapction and gene silencing through recognition of H3K27me3
GEO Series GSE68050. Homo sapiens. 6 samples. Type: Expression profiling by array.
Genomic imprinting of Xist by maternal H3K27me3
GEO Series GSE103714. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
SCNT embryos are defective for H3K27me3 imprinting [RNA-seq]
GEO Series GSE109214. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Chip-chip from MEF cells with H3ac, H4ac, H4K20me1, H3K27me3, H3K9me3, H4K20me3, H3K4me2, H3K4me3 and H3K9ac
GEO Series GSE11335. Mus musculus. 34 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Morphine leads to global genome changes of H3K27me3 levels in mESCs by a self-regulatory mechanism of Polycomb Repressive Complex 2 (PRC2)
GEO Series GSE151234. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Global reduction in H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas
GEO Series GSE89448. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics [RNA-seq DIV3]
GEO Series GSE230712. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of H3K27me3 demethylase deficient B cells
GEO Series GSE185095. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.