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HarP: Harmonized Prior river-lake database
<p><strong>Contact</strong>: Md Safat Sikder (mssikder@illinois.edu), Jida Wang (jidaw@illinois.edu)</p> <p> </p> <p><strong>Citation</strong></p> <p>Sikder, M. S., Wang, J., Allen, G. H., Sheng, Y., Yamazaki, D., Crétaux, J.-F., and Pavelsky, T. M., 2024. HarP: Harmonized Prior river-lake database. <em>Zenodo</em>, <a href="https://doi.org/10.5281/zenodo.14205131">https://doi.org/10.5281/zenodo.14205131</a>.</p> <p>If you only use the PLD-TopoCat dataset, please cite the following paper:</p> <p>Sikder, M. S., Wang, J., Allen, G. H., Sheng, Y., Yamazaki, D., Song, C., Ding, M., Crétaux, J.-F., and Pavelsky, T. M., 2023. Lake-TopoCat: A global lake drainage topology and catchment dataset. <em>Earth System Science Data</em>, 15, 3483-3511, <a href="https://doi.org/10.5194/essd-15-3483-2023">https://doi.org/10.5194/essd-15-3483-2023</a>.</p> <p> </p> <p><strong>Data description and components</strong></p> <p><strong>The Harmonized Prior river-lake database (HarP) for SWOT</strong> integrated the SWOT River Database (SWORD) (<em>Altenau et al.</em>, 2021) and the SWOT Prior Lake Database (PLD) (<em>Wang et al.</em>, 2023) into <strong>a geometrically (lake/river) explicit but topologically harmonized vector database</strong> to allow for coupled fluvial-lacustrine applications, including a synergistic use of both river and lake products from SWOT. </p> <p>In addition to the input river network (SWORD v16) and lake database (PLD v106), we used the MERIT Hydro v1.0.1 (<em>Yamazaki et al.</em>, 2019), a high-resolution (~90 m) global hydrography dataset, to develop this database.</p> <p>The SWORD-PLD harmonization process involves three major steps, with Step 3 being divided into three sub-steps. The processing chain is illustrated in the attached Figure "<em>SWORD-PLD_harmonization_steps.jpg</em>", as well as in Section 2 of the product description document. The HarP database consists of the outputs from each of the steps. For convenience, the global landmass (excluding Antarctica) was partitioned to 68 Pfafstetter Level-2 basins/regions, with their IDs shown in Figure "<em>Pfaf2_basins.jpg</em>" attached.</p> <p> </p> <p>The HarP database consists of five datasets or components (outputs from each step), each with multiple features. The five datasets are described below, and more details are elaborated in the product description document.</p> <p><strong>1. Harmonized SWORD-PLD </strong>(file name "<em>Harmonized_SWORD_PLD</em>"): This is the fully harmonized SWORD-PLD dataset, <strong>the primary product of HarP </strong>(i.e., output of Step 3.3 in Figure "<em>SWORD-PLD_harmonization_steps.jpg</em>"). This dataset couples SWORD and PLD into a geometrically segmented but topologically integrated dataset at the node, reach, and catchment scales (stored by three feature layers, respectively): </p> <p> (a) Harmonized feature nodes: Harmonized_feature_nodes_pfaf_xx<br> (b) Harmonized river network: Harmonized_river_network_pfaf_xx<br> (c) Harmonized feature catchments: Harmonized_feature_catchments_pfaf_xx<br> Note: ''pfaf_xx'' indicates the Pfafstetter Level-2 basin ID (shown in Fig. 'Pfaf2_basins.jpg').</p> <p>Figure "<em>HarP_example.jpg</em>", attached to this database, is an example of the fully harmonized SWORD-PLD dataset for the Ohio River Basin. The example shows three main features of the dataset: feature nodes (i.e., reach downstream ends, lake inlets, and lake outlets; see Fig. 3 in the product description document for definitions), river reaches (i.e., reaches characterized by SWORD alone, characterized by TopoCat alone, and shared by both SWORD and TopoCat), and catchments segmented by each of the feature nodes.</p> <p><strong>2. Intersected SWORD-PLD drainage configuration </strong>(file name "<em>Intersected_SWORD_PLD</em>"): This dataset is the intersected SWORD-PLD (prior river-lake) features (i.e., output of Step 2 in Figure "<em>SWORD-PLD_harmonization_steps.jpg</em>"). This dataset was constructed independently from Step 1 and Step 3. In this dataset, the original geometries of SWORD and PLD are not altered, but instead, their geometric and drainage topological relationships are configured in the attribute tables. This dataset consists of three features:</p> <p> (a) Intersected reaches: Intersected_SWORD_reaches_pfaf_xx<br> (b) Intersected nodes: Intersected_SWORD_nodes_pfaf_xx<br> (c) Intersected lakes: Intersected_PLD_lakes_pfaf_xx</p> <p><strong>3. PLD-TopoCat </strong>(file name "<em>PLD_TopoCat</em>"): This dataset is the lake drainage topology and catchments (TopoCat) for PLD lakes (i.e., output of Step 1 in Figure "<em>SWORD-PLD_harmonization_steps.jpg</em>"). PLD-TopoCat was developed to generate detailed lake drainage topology and connecting paths, which were later used to configure the off-SWORD-network PLD lakes into the tributaries that drain to SWORD. PLD-TopoCat was generated from PLD v106 and MERIT Hydro. Details of the developiong process and algorithm for TopoCat can be found at Sikder at al., (2023). PLD-TopoCat dataset contains six features:</p> <p> (a) Lake original polygon: PLD_lakes_pfaf_xx<br> (b) Lake raster polygon: Lake_raster_polygons_pfaf_xx<br> (c) Lake outlets: Lake_outlets_pfaf_xx<br> (d) Lake catchments: Lake_catchments_pfaf_xx<br> (e) Inter-lake reaches: Inter_lake_reaches_pfaf_xx<br> (f) Lake-network basins: Lake_network_basins_pfaf_xx<br> Note: full version of the PLD-TopoCat is available <a href="https://doi.org/10.5281/zenodo.14202301">here</a>.</p> <p><strong>4. SWORD-mirror network </strong>(file name "<em>SWORD_mirror</em>"): The SWORD-mirror network was constructed to facilitate the SWORD-TopoCat network merging process (i.e., output of Step 3.1 in Figure "<em>SWORD-PLD_harmonization_steps.jpg</em>"). It is essentially <strong>a replica of SWORD except that the original SWORD reaches are geometrically modified to be aligned with the topological/hydrographic information depicted in MERIT Hydro</strong>. The SWORD-mirror network consists of four features:</p> <p> (a) SWORD-original reaches: SWORD_original_reaches_pfaf_xx<br> (b) SWORD-mirror prelim. reaches: SWORD_mirror_prelim_reaches_pfaf_xx<br> (c) SWORD-mirror reaches: SWORD_mirror_reaches_pfaf_xx<br> (d) SWORD-mirror reach catchments: SWORD_mirror_reach_catchments_pfaf_xx</p> <p><strong>5. Merged SWORD-mirror – TopoCat network </strong>(file name "<em>SWORD_TopoCat_merged</em>"): This dataset is the output of Step 3.2 in Figure "<em>SWORD-PLD_harmonization_steps.jpg</em>". It is essentially the merged product of the inter-lake reaches (from Step 2) and SWORD-mirror reaches (from Step 3.1). The merged SWORD-mirror – TopoCat network consists of three features:</p> <p> (a) Merged SWORD-TopoCat reaches: SWORD_TopoCat_merged_reaches_pfaf_xx<br> (b) SWORD nodes at SWORD-TopoCat confluence: SWORD_TopoCat_confluence_nodes_pfaf_xx<br> (c) Reach catchments for merged network: SWORD_TopoCat_reach_catchments_pfaf_xx</p> <p>The attribute tables for each of the feature components are explained in Section 4 of the product description document. All files of HarP are available in both shapefile and geodatabase formats.</p> <p> </p> <p><strong>Disclaimer</strong><br>Authors of this dataset claim no responsibility or liability for any consequences related to the use, citation, or dissemination of HarP. For any quesitons, please contact Safat Sikder and Jida Wang.</p>
Abb. 19 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 19: Fundorte von Dichrorampha rejectana in der Schweiz. Funddaten vor 2000 gelb, nach 2000 rot. Données © CSCF, 2014. Fonds de carte © Swisstopo.
Abb. 17 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 17: Neighbour Joining Tree (Kimura 2 Parameter, produziert mit MEGA 5; cf. Tamura & al. 2011) von Dichrorampha rejectana und ähnlichen Arten; nur Barcodesequenzen> 600 Basenpaare berücksichtigt. Die Breite der Dreiecke repräsentiert den Stichprobenumfang, die Tiefe die genetische Variation innerhalb des Clusters (doppelte Skaleneinheit). Quelle: DNA-Barcodesequenzen aus BOLD (Barcode of Life Database, cf. Ratnasingham & Hebert 2007).
Abb. 13 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 13. Dichrorampha rejectana ♀. VS Zinal, 01. 07. 2014, GP Nr. 1223 W. Wittland, DNA Barcode TLMF Lep 15432.
Abb. 12 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 12. Dichrorampha aeratana ♂. D, Bayern, GP Nr. TOR 420 m. Foto: Tiroler Landesmuseum, Innsbruck.
Abb. 11 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 11. Dichrorampha sedatana ♂. D, Baden-Württemberg, GP Nr. TOR 422 m. Foto: Tiroler Landes-museum, Innsbruck.
Abb. 4 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 4. Dichrorampha rejectana ♂. VS Zinal, 01. 07. 2014, GP Nr. 1217 W. Wittland, DNA Barcode TLMF Lep 15431.
Abb. 8. Dichrorampha rejectana und die D. plumbana-Artengruppe. D in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 8. Dichrorampha rejectana und die D. plumbana-Artengruppe. D. rejectana: ♂ und ♀, wie Abb. 4 und 5. – D. plumbana: ♂, BE Twann, 16. 05. 1985, GP Nr. 2001-136 R. Bryner. ♀, FR Mt. Vully, 20. 05. 2001, GP Nr. 2014-219 R. Bryner. – D. sedatana: ♂, FR Mt. Vully, 20. 05. 2001, GP Nr. 2001-142 R. Bryner. ♀, FR Mt. Vully, 20. 05. 2001, GP Nr. 2014-221 R. Bryner. – D. aeratana: ♂, FR Mt. Vully, 13. 06. 2004, GP Nr. 2004-221 R. Bryner. ♀, BE Plagne, 30. 03. 2010, e. l., GP Nr. 2014-220 R. Bryner.
Abb. 5 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 5. Dichrorampha rejectana ♀. VS Zinal, 01. 07. 2014, GP Nr. 1223 W. Wittland, DNA Barcode TLMF Lep 15432.
Abb. 7 in Wiederentdeckung von Dichrorampha rejectana (DE LA HARPE, 1858) stat. rev., bona species in der Schweiz (Lepidoptera, Tortricidae: Olethreutinae)
Abb. 7. Dichrorampha rejectana ♀. VS Zinal, 01. 07. 2014, Genitalpräparat Nr. 1223 W. Wittland, DNA Barcode TLMF Lep 15432.
Fig. 18. Male genitalia and harpe. A–C in Review of the fritillary species systematically close to Melitaea lutko Evans, 1932 (Lepidoptera: Nymphalidae) with analysis of their geographic distribution and interrelations with host plants
Fig. 18. Male genitalia and harpe. A–C. Melitaea shahvarica sp. nov. D–E. M. lutko Evans, 1932. F–I. M. mimetica Higgins, 1940. A–C. Iran, Semnan Prov., Shahrud area, S macroslope of Shahvar Mts, alt. 2200–2400 m. D–E. Pakistan, Chitral, Chaghbini, CGNP [Chitral Gol National Park], alt. 2700 m. F–G. Afghanistan, Bamian Prov., Punjub Distr., 10 km. NE Varas v., alt. 2400 m. H–I. Afghanistan, Bamian Prov., Panjub Distr., 10 km. NE Varas vil., alt. 2400 m.
Fig. 19. Male genitalia and harpe. A–C in Review of the fritillary species systematically close to Melitaea lutko Evans, 1932 (Lepidoptera: Nymphalidae) with analysis of their geographic distribution and interrelations with host plants
Fig. 19. Male genitalia and harpe. A–C. Melitaea timandra timandra Coutsis & van Oorschot, 2014. D–I. M. timandra binaludica subsp. nov. A–C. Turkmenistan, Sary-Yazy, alt. 300 m. D–F. Iran, Rezavi Khorassan Prov., Kuh-e-Binalud Mts, Dorrud v. vicinity, alt. 2430 m. G. Afghanistan, Bamian Prov., Band-e-Amir, alt. 3200 m. H. Afghanistan, Bamian Prov., Band-e-Amir, Dzhudoi-Kvak Gorge, alt. 3200 m. I. Afghanistan, Band-e-Amir, Hazarajat.
PLATE IA. Natula Gorochov, 1987. (A–L), Natula matsuurai (Sugimoto, 2001): A, Male; B, Female; C, Face with a transverse dark strip near epistomal suture; D, Fifth joint of maxillary palpi hatchet shaped; E, Lateral field of tegmina deeper than lateral lobe of pronotum; F, Hind tibia with 3 pairs of dorsal spines on both sides but largest inner apical spurs as long as or half of basitarsus; G, Fore tibia with oval shaped outer and inner tympanum; H, Harp vein only one, Mirror area occupying half dorsal surface, not divided with a small concentric inner veinlet; I, Pronotum with roundly convex anterior margin; J, Female ovipositor strongly upcurved, half as long as hind femur, three fifth area from base widened and bumpy, with a dorsal groove, cerci as long as ovipositor; K, Male sub-genital plate longer than wide, hind margin narrowly truncated with a small projected median lobe, two styli present; L, Female sub-genital plate roundly triangular. in JHABAR MAL, RAJENDRA NAGAR & R. SWAMINATHAN (2014) Record of Natula matsuurai Sugimoto (Orthoptera: Gryllidae: Trigonidiinae) and other sword-tailed crickets from India. Zootaxa, 3760(3): 458-462.
PLATE IA. Natula Gorochov, 1987. (A–L), Natula matsuurai (Sugimoto, 2001): A, Male; B, Female; C, Face with a transverse dark strip near epistomal suture; D, Fifth joint of maxillary palpi hatchet shaped; E, Lateral field of tegmina deeper than lateral lobe of pronotum; F, Hind tibia with 3 pairs of dorsal spines on both sides but largest inner apical spurs as long as or half of basitarsus; G, Fore tibia with oval shaped outer and inner tympanum; H, Harp vein only one, Mirror area occupying half dorsal surface, not divided with a small concentric inner veinlet; I, Pronotum with roundly convex anterior margin; J, Female ovipositor strongly upcurved, half as long as hind femur, three fifth area from base widened and bumpy, with a dorsal groove, cerci as long as ovipositor; K, Male sub-genital plate longer than wide, hind margin narrowly truncated with a small projected median lobe, two styli present; L, Female sub-genital plate roundly triangular.
Figs 2–4 in Hydrophilus harpe sp. nov., a remarkable new species of giant water scavenger beetle from Brazil (Coleoptera: Hydrophilidae)
Figs 2–4. Hydrophilus (D.) harpe sp. nov. 2 – male paratype, head, ventral view; 3 – male paratype, protarsus; 4 – male holotype, aedeagus, dorsal and ventral views.
Figure 11. Right harpes, inner views. A in The phylogenetic relationships of Morgan's Sphinx, Xanthopan morganii (Walker), the tribe Acherontiini, and allied long-tongued hawkmoths (Lepidoptera: Sphingidae, Sphinginae)
Figure 11. Right harpes, inner views. A, Agrius godarti, BMNH sphingid preparation #1038. B, Coelonia fulvinotata, BMNH sphingid preparation #996. C, Coelonia brevis, BMNH sphingid preparation #1057. D, Coelonia solani, BMNH sphingid preparation #1042. E, Acherontia atropos, BMNH sphingid preparation #994. F, Megacorma obliqua, BMNH sphingid preparation #1026. G, Meganoton rubescens, BMNH sphingid preparation #989. H, Manduca hannibal, BMNH sphingid preparation #1077. I, Cocytius antaeus, BMNH sphingid preparation #1035; dense tuft of brown setae on dorsal surface not shown. J, Manduca rustica, BMNH sphingid preparation #1075.
Hourly detections of echolocation clicks in Hawaiian Island HARP data from Hawai`i, Kaua`i, and Manawai with species labels
<p>This dataset consists of counts of detections of echolocation clicks at three sites in the Hawaiian Islands Archipelago. These sites are Hawaii, Kauai, and Manawai (also known as Pearl and Hermes Reef). Echolocation clicks have been labeled using a neural network classifier that was trained and tested on data from the Hawaiian Islands and can successfully identify many species of regionally present odontocetes. During the labeling process, clicks were grouped into one-minute bins and each bin was given a species' label. The data provided here is further binned at an hourly level, where counts of a given species represent the number of one-minute bins within a given hour that were labeled as that species (up to a maximum of 60). One file is provided per site, and files are in .csv format that can be read using any desired coding language.<span> </span></p>
Habitat Assessment and Restoration Planning (HARP) Model for the Snohomish and Stillaguamish River Basins
<p>Model code (R) to accompany the 2023 NOAA report "Habitat Assessment and Restoration Planning (HARP) Model for the Snohomish and Stillaguamish River Basins"</p>
Abb. 2 in Elophos caelibaria senilaria (Fuchs, 1901) und spurcaria (de la Harpe, 1853) in der Schweiz und Vorarlberg, Österreich (Lepidoptera: Geometridae).
Abb. 2. Männchen und kurzflügelige Weibchen von Elophos caelibaria senilaria (1–6) und spurcaria (7–12). 1–2: CH Brisen-Haldigrat (NW), 2 200 m, 5.8.1975 und 29.7.1984. 3–4: CH Pilatus-Kulm (NW / OW), 2 050 m, 11.7.1979 und 21.–31.7.1979. 5–6: D Aggenstein, Allgäu, 2 000 m, 22.6.1949 und A Sattelspitze, Nordtirol, 2 310 m, 9.8.1940. 7–8: CH Umbrailpass (GR), Nordseite, 2 450 m, 26.7.1990 und CH Zermatt (VS), Gornergrat, 3 000 m, 7.7.1976. 9–10: CH Zermatt (VS), Riffelsee, 2 700 m, 7.7.1976 (2). 11–12: A Timmelsjoch, Ötztal, 2 600 m, 14.7.1974 und CH Saas Fee (VS), 2 400 m, 21.–31.7.1956.
Abb. 1 in Elophos caelibaria senilaria (Fuchs, 1901) und spurcaria (de la Harpe, 1853) in der Schweiz und Vorarlberg, Österreich (Lepidoptera: Geometridae).
Abb. 1. Die im Text erwähnten fünf Fundgebiete von Elophos caelibaria in Vorarlberg, Österreich (O = ssp. senilaria, X = ssp. spurcaria). Reproduziert mit Bewilligung von «swisstopo» (BA 12099).
HARP North Atlantic beaked whales: Echolocation click collection for machine learning
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