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209 results for “KG”
Clay content in % (kg / kg) at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution
<p>Clay content in % (kg / kg) at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution. Based on machine learning predictions from global compilation of soil profiles and samples. Processing steps are described in detail <strong><a href="https://gitlab.com/openlandmap/global-layers/tree/master/soil">here</a></strong>. Antarctica is not included.</p> <p>To access and visualize maps use: <a href="http://www.openlandmap.org/">OpenLandMap.org</a></p> <p>If you discover a bug, artifact or inconsistency in the maps, or if you have a question please use some of the following channels:</p> <ul> <li>Technical issues and questions about the code: <a href="https://gitlab.com/openlandmap/global-layers/issues">https://gitlab.com/openlandmap/global-layers/issues</a> </li> <li>General questions and comments: <a href="https://disqus.com/home/forums/landgis/">https://disqus.com/home/forums/landgis/</a></li> </ul> <p>All files internally compressed using "COMPRESS=DEFLATE" creation option in GDAL. File naming convention:</p> <ul> <li>sol = theme: soil,</li> <li>clay.wfraction = variable: sand weight fraction,</li> <li>usda.3a1a1a = determination method: laboratory method code,</li> <li>m = mean value,</li> <li>250m = spatial resolution / block support: 250 m,</li> <li>b10..10cm = vertical reference: 10 cm depth below surface,</li> <li>1950..2017 = time reference: period 1950-2017,</li> <li>v0.2 = version number: 0.2,</li> </ul>
Soil organic carbon content in x 5 g / kg at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution
<p>Soil organic carbon content in × 5 g / kg (to convert to % divide by 2) at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution. The maps are provided using Byte type to significantly reduce file size. Predicted from a global compilation of soil points. Also available for download: soil organic stock maps in in kg / m<sup>2</sup> (<a href="https://doi.org/10.5281/zenodo.1475453">https://doi.org/10.5281/zenodo.1475453</a>) and bulk density maps in kg / m<sup>3</sup> (<a href="https://doi.org/10.5281/zenodo.1475970">https://doi.org/10.5281/zenodo.1475970</a>). Processing steps are described in detail <strong><a href="https://gitlab.com/openlandmap/global-layers/tree/master/soil">here</a></strong>. Antarctica is not included.</p> <p>To access and visualize maps use: <a href="http://www.openlandmap.org/">OpenLandMap.org</a></p> <p>If you discover a bug, artifact or inconsistency in the maps, or if you have a question please use some of the following channels:</p> <ul> <li>Technical issues and questions about the code: <a href="https://gitlab.com/openlandmap/global-layers/issues">https://gitlab.com/openlandmap/global-layers/issues</a> </li> <li>General questions and comments: <a href="https://disqus.com/home/forums/landgis/">https://disqus.com/home/forums/landgis/</a></li> </ul> <p>All files internally compressed using "COMPRESS=DEFLATE" creation option in GDAL. File naming convention:</p> <ul> <li>sol = theme: soil,</li> <li>organic.carbon = variable: soil organic carbon content in x 5 g / kg,</li> <li>usda.6a1c = determination method: laboratory method code,</li> <li>m = mean value,</li> <li>250m = spatial resolution / block support: 250 m,</li> <li>b10..10cm = vertical reference: 10 cm depth below surface,</li> <li>1950..2017 = time reference: period 1950–2017,</li> <li>v0.2 = version number: 0.2,</li> </ul>
Sand content in % (kg / kg) at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution
<p>Sand content in % (kg / kg) at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution. Based on machine learning predictions from global compilation of soil profiles and samples. Processing steps are described in detail <strong><a href="https://gitlab.com/openlandmap/global-layers/tree/master/soil">here</a></strong>. Antarctica is not included.</p> <p>To access and visualize maps use: <a href="http://www.openlandmap.org/">OpenLandMap.org</a></p> <p>If you discover a bug, artifact or inconsistency in the maps, or if you have a question please use some of the following channels:</p> <ul> <li>Technical issues and questions about the code: <a href="https://gitlab.com/openlandmap/global-layers/issues">https://gitlab.com/openlandmap/global-layers/issues</a> </li> <li>General questions and comments: <a href="https://disqus.com/home/forums/landgis/">https://disqus.com/home/forums/landgis/</a></li> </ul> <p>All files internally compressed using "COMPRESS=DEFLATE" creation option in GDAL. File naming convention:</p> <ul> <li>sol = theme: soil,</li> <li>sand.wfraction = variable: sand weight fraction,</li> <li>usda.3a1a1a = determination method: laboratory method code,</li> <li>m = mean value,</li> <li>250m = spatial resolution / block support: 250 m,</li> <li>b10..10cm = vertical reference: 10 cm depth below surface,</li> <li>1950..2017 = time reference: period 1950-2017,</li> <li>v0.2 = version number: 0.2,</li> </ul>
Soil bulk density (fine earth) 10 x kg / m-cubic at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution
<p>Soil bulk density (fine earth) 10 x kg / m<sup>3</sup> at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution. Processing steps are described in detail <strong><a href="https://gitlab.com/openlandmap/global-layers/tree/master/soil">here</a></strong>. Antarctica is not included.</p> <p>To access and visualize maps use: <a href="http://www.openlandmap.org/">OpenLandMap.org</a></p> <p>If you discover a bug, artifact or inconsistency in the maps, or if you have a question please use some of the following channels:</p> <ul> <li>Technical issues and questions about the code: <a href="https://gitlab.com/openlandmap/global-layers/issues">https://gitlab.com/openlandmap/global-layers/issues</a> </li> <li>General questions and comments: <a href="https://disqus.com/home/forums/landgis/">https://disqus.com/home/forums/landgis/</a></li> </ul> <p>All files internally compressed using "COMPRESS=DEFLATE" creation option in GDAL. File naming convention:</p> <ul> <li>sol = theme: soil,</li> <li>bulkdens.fineearth = variable: soil bulk density,</li> <li>usda.4a1h = determination method: laboratory method code,</li> <li>m = mean value,</li> <li>250m = spatial resolution / block support: 250 m,</li> <li>b10..10cm = vertical reference: 10 cm depth below surface,</li> <li>1950..2017 = time reference: period 1950-2017,</li> <li>v0.2 = version number: 0.2,</li> </ul>
PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWL (v2.0.0 - January 2021)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Class-Standard Relations-OWL</i></p><p><strong>Build Date: </strong>January 25, 2021</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/January-25%2C-2021">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Instance-Inverse Relations-OWLNETS (v2.0.0 - May 2020)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Instance-InverseRelations-OWLNETS</i></p><p><strong>Build Date: </strong>May 10, 2020</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/May-10%2C-2020">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWLNETS (v2.0.0 - January 2021)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Instance-Standard Relations-OWLNETS</i></p><p><strong>Build Date: </strong>January 25, 2021</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/January-25%2C-2021">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Instance-Inverse Relations-OWLNETS (v2.0.0 - January 2021)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Instance-Inverse Relations-OWLNETS</i></p><p><strong>Build Date: </strong>January 25, 2021</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/January-25%2C-2021">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWL (v2.0.0 - May 2020)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Instance-StandardRelations-OWL</i></p><p><strong>Build Date: </strong>May 10, 2020</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/May-10%2C-2020">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWLNETS (v2.0.0 - May 2020)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Instance-StandardRelations-OWLNETS</i></p><p><strong>Build Date: </strong>May 10, 2020</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/May-10%2C-2020">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Instance-Inverse Relations-OWL (v2.0.0 - May 2020)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Instance-InverseRelations-OWL</i></p><p><strong>Build Date: </strong>May 10, 2020</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/May-10%2C-2020">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Class-Inverse Relations-OWL (v2.0.0 - January 2021)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Class-Inverse Relations-OWL</i></p><p><strong>Build Date: </strong>January 25, 2021</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/January-25%2C-2021">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Class-Inverse Relations-OWLNETS (v2.0.0 - May 2020)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Class-InverseRelations-OWLNETS</i></p><p><strong>Build Date: </strong>May 10, 2020</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/May-10%2C-2020">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWLNETS (v2.0.0 - January 2021)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Class-Standard Relations-OWLNETS</i></p><p><strong>Build Date: </strong>January 25, 2021</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/January-25%2C-2021">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Class-Inverse Relations-OWLNETS (v2.0.0 - January 2021)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Class-Inverse Relations-OWLNETS</i></p><p><strong>Build Date: </strong>January 25, 2021</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/January-25%2C-2021">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Instance-Inverse Relations-OWL (v2.0.0 - January 2021)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Instance-Inverse Relations-OWL</i></p><p><strong>Build Date: </strong>January 25, 2021</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/January-25%2C-2021">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Class-Inverse Relations-OWL (v2.0.0 - May 2020)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Class-InverseRelations-OWL</i></p><p><strong>Build Date: </strong>May 10, 2020</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/May-10%2C-2020">here</a>.</li></ul>
PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWLNETS (v2.0.0 - May 2020)
<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds (v2.0.0)</strong></p><p><strong>Build Type: </strong><i>Class-Standard Relations-OWLNETS</i></p><p><strong>Build Date: </strong>May 10, 2020</p><p> </p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p> </p><p>🚨 <strong>AVAILABLE FILES </strong>🚨 </p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page 👉 <a href="https://github.com/callahantiff/PheKnowLator/wiki/May-10%2C-2020">here</a>.</li></ul>
FabWave Product Design Knowlsdge Graph (FPD-KG)
<p>FabWave Product Design Knowledge Graph: A Knowledge Graph for product design & manufacturing, constructed using the openly available and academia-sourced 3D CAD data. (Starly, Binil; Bharadwaj, Akshay; Angrish, Atin. (2019). FabWave CAD Repository Categorized Part Classes. 10.13140/RG.2.2.31167.87201.)</p>
MIRA-KG: A Knowledge Graph of Hypotheses and Findings for Social Demography Research
<p>A shift in scientific publishing from paper-based to knowledge-based practices promotes reproducibility, machine actionability and knowledge discovery. This is important for disciplines like social science, as study indicators are often social constructs such as race or education; hypothesis tests are challenging to compare in demographic research due to their limited temporal and spatial coverage; and natural language in research papers is often imprecise and ambiguous. Therefore, we present the MIRA-KG, consisting of: (1) an ontology for capturing social demography research, which links hypotheses and findings to evidence, (2) annotations of papers on health inequality in terms of the ontology, gathered by (i) prompting a Large Language Model to annotate paper abstracts using the ontology, (ii) mapping concepts to terms from NCBO BioPortal ontologies and GeoNames, and (iii) refining the final graph by a set of SHACL constraints, developed according to data quality criteria. The utility of the resource lies in its use for formally representing social demography research hypotheses, discovering research biases, discovery of knowledge, and the derivation of novel questions.<br><br>This dataset was generated using the code available on Github at <a href="https://w3id.org/mira/">https://w3id.org/mira/</a> at version v1.0. It uses the following ontology: <a href="https://w3id.org/mira/ontology/">https://w3id.org/mira/ontology/</a>. </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.