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35 results for “Koppe”
Nature Communications 2020 Kopp et al JunD ChIP-seq SeqDatas
<p>This record represents SeqData objects saved as Zarr files (https://github.com/ML4GLand/SeqData) derived from ENCODE consortium ChIP-seq experiments with the JunD transcription. This data was used in one of the use cases in the EUGENe publication (https://github.com/ML4GLand/EUGENe_paper), and includes objects used in various tutorials available in the ML4GLand GitHub organization.</p> <p>These files are primarily accessed via the SeqDatasets package (https://github.com/ML4GLand/SeqDatasets).</p>
FIGURE 2 in Remarks on the spider genus Koppe Deeleman-Reinhold, 2001 (Araneae: Liocranidae), including the first records from India
FIGURE 2. Koppe fusca sp. nov., genitalia of holotype female. A epigyne, ventral view. B vulva, dorsal view. Abbreviations: CD, copulatory duct; EW, epigynal window; FD, fertilization duct; ITD, inter tubular duct; MF, median flap; ST I, spermatheca I; ST II, spermatheca II. Scale bars: A–B, 0.2 mm.
FIGURE 3 in Remarks on the spider genus Koppe Deeleman-Reinhold, 2001 (Araneae: Liocranidae), including the first records from India
FIGURE 3. Koppe armata (Simon, 1896), female from Sri Lanka. A prosoma, dorsal view; B same, prolateral view; C opisthosoma, prolateral view; D left femur I showing two prolateral spines, ventral view; E left femur I showing ventral thornlike spines, retrolateral view; F left tibia and metatarsus I showing prolateral ventral spines, prolateral view; G same, showing retrolateral ventral spines, retrolateral view; H epigyne, ventral view; I labels from the vial. Arrows indicate prolateral spines. Figures not to scales. © RMNH, Netherlands.
FIGURE 1 in Remarks on the spider genus Koppe Deeleman-Reinhold, 2001 (Araneae: Liocranidae), including the first records from India
FIGURE 1. Koppe fusca sp. nov., holotype female. A habitus, dorsal view; B same, retrolateral view; C same, frontal view; D prosoma showing endites, labium and sternum, ventral view; E left chelicera, prolateral view; F same, ventral view; G left femur I showing prolateral spines, prolateral view; H left metatarsus III showing preening brush, retrolateral view; I epigyne, ventral view; J vulva, dorsal view. Arrows indicate prolateral spines (1) and preening brush (2). Scale bars: A–B, 1 mm; C–D, H, 0.5 mm; E–G, I–J, 0.2 mm.
Saras bun kopp
Source: Objaverse 1.0 / Sketchfab
Figure 6 from: Espinasa L, Collins E, Finocchiaro A, Kopp J, Robinson J, Rutkowski J (2016) Incipient regressive evolution of the circadian rhythms of a cave amphipod. Subterranean Biology 20: 1-13. https://doi.org/10.3897/subtbiol.20.10010
Figure 6 - Stygobromus allegheniensis has continuous light avoidance behavior which does not appear to follow circadian rhythmicity. White boxes indicate illuminated conditions.
Figure 3 from: Espinasa L, Collins E, Finocchiaro A, Kopp J, Robinson J, Rutkowski J (2016) Incipient regressive evolution of the circadian rhythms of a cave amphipod. Subterranean Biology 20: 1-13. https://doi.org/10.3897/subtbiol.20.10010
Figure 3 - Variability in motor rhythms while in continuous darkness in three Ice Cave individuals (A–C) and four Clarksville Cave individuals (D–G) tested in the laboratory. Black boxes indicate periods while in darkness.
Figure 2 from: Espinasa L, Collins E, Finocchiaro A, Kopp J, Robinson J, Rutkowski J (2016) Incipient regressive evolution of the circadian rhythms of a cave amphipod. Subterranean Biology 20: 1-13. https://doi.org/10.3897/subtbiol.20.10010
Figure 2 - Experimental protocol and representative motor rhythms of one individual. Ice Cave individuals were subjected in the laboratory to the following conditions: Five half-cycles of darkness, followed by two cycles of light/dark during normal day/night schedules, followed by two cycles of dark/light during reverse day/night schedules, followed by a half-cycle of darkness. Black boxes indicate dark conditions while white boxes represent illuminated conditions. Movements were evaluated for each 10-minute period.
Figure 7 from: Espinasa L, Collins E, Finocchiaro A, Kopp J, Robinson J, Rutkowski J (2016) Incipient regressive evolution of the circadian rhythms of a cave amphipod. Subterranean Biology 20: 1-13. https://doi.org/10.3897/subtbiol.20.10010
Figure 7 - Specimens from Clarksville Cave (A–C) and the Ice Cave (D–F) studied in the natural environment of the cave. Under continuous darkness, most specimens had periods of activity with no clear indication of periodicity. Only in one of them (E) there was an apparent 12 hour rest period. Black boxes indicate periods while in darkness.
Figure 1 from: Espinasa L, Collins E, Finocchiaro A, Kopp J, Robinson J, Rutkowski J (2016) Incipient regressive evolution of the circadian rhythms of a cave amphipod. Subterranean Biology 20: 1-13. https://doi.org/10.3897/subtbiol.20.10010
Figure 1 - Adult and juvenile specimens of Stygobromus allegheniensis from Ice Cave #1 at Sam's Point Preserve. As is typical of cave-adapted organisms, this species is depigmented, has long appendages, and is fully eyeless. Nonetheless, it can detect light and actively avoids it.
Figure 4 from: Espinasa L, Collins E, Finocchiaro A, Kopp J, Robinson J, Rutkowski J (2016) Incipient regressive evolution of the circadian rhythms of a cave amphipod. Subterranean Biology 20: 1-13. https://doi.org/10.3897/subtbiol.20.10010
Figure 4 - Motor activity followed periods of light or darkness regardless of the time of the day. Individuals on the left (A–C) are the same as individuals on the right (A'–C'). Black boxes indicate periods while in darkness and white boxes indicate illuminated conditions.
Figure 5 from: Espinasa L, Collins E, Finocchiaro A, Kopp J, Robinson J, Rutkowski J (2016) Incipient regressive evolution of the circadian rhythms of a cave amphipod. Subterranean Biology 20: 1-13. https://doi.org/10.3897/subtbiol.20.10010
Figure 5 - Entrainment by light is apparently not functioning in the Ice Cave (A–C and A'–C') and Clarksville Cave (D–G) populations. In Stygobromus allegheniensis, the second dark period lacks the anticipation and synchronization of a period of activity, which is a hallmark of organisms possessing a light-entrained circadian rhythm. Black boxes indicate periods while in darkness and white boxes indicate illuminated conditions.
Figure 4 from: Kopp J, Avasthi S, Espinasa L (2018) Phylogeographical convergence between Astyanax cavefish and mysid shrimps in the Sierra de El Abra, Mexico. Subterranean Biology 26: 75-84. https://doi.org/10.3897/subtbiol.26.27097
Figure 4 Pylogeographical convergence between mysid shrimps in the Sierra de El Abra and the mtDNA of Astyanax cavefish (right). Both aquatic species harbor the evolutionary signature of a phylogeographical discordance, where genetic markers of populations in central Sierra de El Abra are extremely distinct from the rest of the populations. Nuclear tree (left) based on the consensus of isoenzymes, RAPDs, microsatellite, and genomic sequences. a) Pachón as representative of northern populations. b-c) Sabinos and Tinaja as representative of central populations. d) Chica and Chiquitita as representative of southern populations.
Figure 3 from: Kopp J, Avasthi S, Espinasa L (2018) Phylogeographical convergence between Astyanax cavefish and mysid shrimps in the Sierra de El Abra, Mexico. Subterranean Biology 26: 75-84. https://doi.org/10.3897/subtbiol.26.27097
Figure 3 A, Base pair differences of histone 3 sequences between mysid shrimps. Specimens from central Sierra de El Abra (Lineage B) are markedly different from all other populations (Lineage A).
Figure 2 from: Kopp J, Avasthi S, Espinasa L (2018) Phylogeographical convergence between Astyanax cavefish and mysid shrimps in the Sierra de El Abra, Mexico. Subterranean Biology 26: 75-84. https://doi.org/10.3897/subtbiol.26.27097
Figure 2 Cave localities of A.mexicanus whose mitochondrial DNA has been analyzed. With larger font and underlined are localities where S.quinterensis were also collected. In red are caves harboring lineage A and in blue those with lineage B for both mtDNA in Astyanax and histone 3 for S.quinterensis. Notice that lineage B is restricted to a small biogeographical zone, circled in blue. A Molino B Caballo Moro C Pachón D Yerbaniz E Japones F Sabinos G Tinaja H Piedras I Curva J Chica K Chiquitita L Rio Subterraneo. (Figure modified from Mitchell et al. 1977).
Figure 1 from: Kopp J, Avasthi S, Espinasa L (2018) Phylogeographical convergence between Astyanax cavefish and mysid shrimps in the Sierra de El Abra, Mexico. Subterranean Biology 26: 75-84. https://doi.org/10.3897/subtbiol.26.27097
Figure 1 AAstyanaxmexicanus from Chiquitita cave B The mysid shrimp, Spelaeomysisquinterensis, also from Chiquitita cave. Both stygobitic organisms have overlapping biogeographic ranges throughout the El Abra karstic area, in northeaster Mexico.
Abb 7 from: Kopp A, Brägger H (2017) Sieben Erstfunde und eine Bestätigung alter Nachweise für die Schmetterlingsfauna der Schweiz (Lepidoptera: Elachistidae, Gelechiidae, Tortricidae, Pyralidae). Alpine Entomology 1: 109-113. https://doi.org/10.3897/alpento.1.22024
Abb 7 - Hypochalcia dignella (Foto A. Kopp).
Abb 3 from: Kopp A, Brägger H (2017) Sieben Erstfunde und eine Bestätigung alter Nachweise für die Schmetterlingsfauna der Schweiz (Lepidoptera: Elachistidae, Gelechiidae, Tortricidae, Pyralidae). Alpine Entomology 1: 109-113. https://doi.org/10.3897/alpento.1.22024
Abb 3 - Chionodes continuella (Foto A. Kopp).
Abb 5 from: Kopp A, Brägger H (2017) Sieben Erstfunde und eine Bestätigung alter Nachweise für die Schmetterlingsfauna der Schweiz (Lepidoptera: Elachistidae, Gelechiidae, Tortricidae, Pyralidae). Alpine Entomology 1: 109-113. https://doi.org/10.3897/alpento.1.22024
Abb 5 - Pelochrista huebneriana (Foto A. Kopp).
Abb 2 from: Kopp A, Brägger H (2017) Sieben Erstfunde und eine Bestätigung alter Nachweise für die Schmetterlingsfauna der Schweiz (Lepidoptera: Elachistidae, Gelechiidae, Tortricidae, Pyralidae). Alpine Entomology 1: 109-113. https://doi.org/10.3897/alpento.1.22024
Abb 2 - Elachista hedemanni GP 7.100 (Foto A. Kopp).
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Allen Brain Atlas
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International Brain Laboratory public data
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OpenNeuro
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