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3 results for “Multi-parameter data”

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zenodo40/100

Test data set for macros accompanying the publication Multi-parameter screening method for developing optimized red fluorescent proteins

<p>This a bundle of test data can be used to run the macros accompanying the publication Multi-parameter screening method for developing optimized red fluorescent proteins.</p> <p>These data sets can be used to run the following macros that can be found on GitHub:</p> <ol> <li><a href="https://github.com/molcyto/MC-Ratio-96-wells">https://github.com/molcyto/MC-Ratio-96-wells</a></li> <li><a href="https://github.com/molcyto/MC-Ratio-Petri-dish">https://github.com/molcyto/MC-Ratio-Petri-dish</a></li> <li><a href="https://github.com/molcyto/MC-FLIM-Petri-dish">https://github.com/molcyto/MC-FLIM-Petri-dish</a></li> <li><a href="https://github.com/molcyto/MC-Bleach-96-wells">https://github.com/molcyto/MC-Bleach-96-wells</a></li> <li><a href="https://github.com/molcyto/MC-Scatter5D">https://github.com/molcyto/MC-Scatter5D</a></li> <li><a href="https://github.com/molcyto/MC-FLIM-96-wells">https://github.com/molcyto/MC-FLIM-96-wells</a></li> </ol> <p>Funding:<br> This work was supported by the NWO CW-Echo grant 711.011.018 (M.A.H. and T.W.J.G.), grant 12149 (T.W.J.G.) from the Foundation for Technological Sciences (STW) from the Netherlands</p> <p>&nbsp;</p>

opencc-by-4.0Jul 2019View details →
zenodo40/100

Data for: Quantitative Multi-Parameter Mapping in Magnetic Resonance Imaging

<p>Magnetic Resonance Imaging&nbsp;measurement data used in the PhD thesis &quot;Quantitative Multi-Parameter Mapping in Magnetic Resonance Imaging&quot;. The data is provided in a&nbsp;file format used by the BART toolbox (DOI:&nbsp;<a href="http://doi.org/10.5281/zenodo.592960">10.5281/zenodo.592960</a>).<br> &nbsp;</p> <p>Further information about the individual datasets:</p> <p>data_invivo_b0map<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; B0 Map<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; Two GRE Acquisitions with different TE, &quot;gre_field_mapping&quot; Sequence<br> &nbsp;&nbsp;&nbsp; TR|TE1|TE2 [ms]: 400|4.92|7.38<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 60<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240</p> <p>data_invivo_b1map<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; B1 Map<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; Preconditioned RF pulse with TurboFLASH Readout<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 6830|2.19<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 8<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240</p> <p>data_invivo_irflash<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR FLASH<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 3.8|2.26<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 8<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 7</p> <p>data_invivo_irbssfp<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 45<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 7</p> <p>data_invivo_irbssfp_shim<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 45<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 7<br> &nbsp;&nbsp;&nbsp; missing shim break</p> <p>data_vfa_b0map<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; B0 Map<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; Two GRE Acquisitions with different TE, &quot;gre_field_mapping&quot; Sequence<br> &nbsp;&nbsp;&nbsp; TR|TE1|TE2 [ms]: 400|4.92|7.38<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 60<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240</p> <p>data_vfa_b1map<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; B1 Map<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; Preconditioned RF pulse with TurboFLASH Readout<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 6830|2.19<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 8<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240</p> <p>data_vfa_irflash<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR FLASH<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 3.8|2.26<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 8<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p> <p>data_vfa_irbssfp_20<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 20<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p> <p>data_vfa_irbssfp_40<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 40<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p> <p>data_vfa_irbssfp_45<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 45<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p> <p>data_vfa_irbssfp_50<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 50<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p> <p>data_vfa_irbssfp_60<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 60<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p> <p>data_vfa_irbssfp_70<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 70<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p> <p>data_vfa_irbssfp_77<br> &nbsp;&nbsp;&nbsp; Type:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Radial Single-Shot Dataset<br> &nbsp;&nbsp;&nbsp; Object:&nbsp;&nbsp;&nbsp;&nbsp; Single-slice of volunteers brain<br> &nbsp;&nbsp;&nbsp; Sequence:&nbsp;&nbsp; IR bSSFP<br> &nbsp;&nbsp;&nbsp; TR|TE [ms]: 4.5|2.25<br> &nbsp;&nbsp;&nbsp; FA [deg]:&nbsp;&nbsp; 77<br> &nbsp;&nbsp;&nbsp; T_RF [ms]:&nbsp; 1<br> &nbsp;&nbsp;&nbsp; BWTP:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4<br> &nbsp;&nbsp;&nbsp; FOV [mm]:&nbsp;&nbsp; 240<br> &nbsp;&nbsp;&nbsp; #Tiny GA:&nbsp;&nbsp; 13</p>

opencc-by-4.0Apr 2023View details →
zenodo32/100

Data from "Single-molecule fluorescence multiplexing by multi-parameter spectroscopic detection of nanostructured FRET labels"

<p>Source data for all figures; full table of all nucleic acid sequences used; Supplementary Video 1 showing rotating view of Fig. 4e.</p>

opencc-by-4.0Mar 2024View details →

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International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

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OpenNeuro

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neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record