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25 results for “Multilocus genotypes”
Individual multilocus genotypes from four populations of Helichrysum arenarium (Asteraceae) from Belgium and Germany
<p>Individual multilocus genotypes based on 11 microsatellites loci from four populations of <em>Helichrysum arenarium</em> (Asteraceae) from Belgium and Germany. For more details, see Van Rossum et al. 2024 "Genetic diversity assessment of <em>Helichrysum arenarium</em> (Asteraceae) for the genetic restoration of declining populations" in Ecology and Evolution</p>
Fig. 15 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 15. Dendrogram of Onchocerca from this study, various other Onchocerca sequences and Litomosoides sigmodontis as an outgroup based on a dataset of 579 positions of the mitochondrial cox1 gene, estimated by using the Maximum Likelihood method and TN93 + G + I substitution model (Tamura and Nei, 1993). The tree with the highest log likelihood (– 2902.13) is shown. Bootstrap values over 50 are shown next to the branches. Sequences newly generated in this study are in bold.
Fig. 14 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 14. Dendrogram of Onchocerca from this study, additional Onchocerca species and Setaria labiatopapillosa, Oswaldofilaria chabaudi and Icosiella neglecta as outgroups based on a dataset of 935 positions of the concatenated mitochondrial cox1 and 12S rDNA gene, estimated by using the Maximum Likelihood method and GTR + G + I substitution model (Nei and Kumar, 2000). The tree with the highest log likelihood (– 4758.48) is shown. Bootstrap values over 50 are shown next to the branches. Sequences newly generated in this study are in bold.
Fig. 10 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 10. Onchocerca skrjabini: A. Head end of male, with undifferentiated oesophagus. B, C. Distribution of papillae on male tail of two different individuals. D. Lateral view of male tail with spicules in situ. E. Longer left and smaller right spicule. Right spicule in two views to show ventral groove in distal part: on right hand side in lateral view, on left hand side in ventral view, showing dorsolateral knob on tip. F. Female head end, with differentiated oesophagus, vulva in distal forth of oesophagus. G. Longitudinal section in small anterior part of female, showing unpaired part of uterus filling out anterior body with relatively large microfilaria in it. Cuticular ridges over striae in ratio 1: 4. H. Tail end of female, with two phasmids spaced apart. Fine cuticular transversal annulation is indicated. I. Tail end of a second female, lateral view (in smaller scale). Note slight club shape of both. J. Microfilaria (intrauterine) with fine striation hinted at the neck, subapical oval marking with ridges.
Fig. 7 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 7. Onchocerca flexuosa: Heteromorphous cuticle of female: A. Onchocerca-similar cuticle in two layers, with fine striae in medulla, but lacking ridges on surface. B. Medullar waves without cuticular ridges. C. Entire cuticle forming transversal rings. D. Cuticle with repeated pattern of one bigger, followed by two smaller transversal rings.
Fig. 8 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 8. Onchocerca flexuosa: Relation between vast internal space in body and thin intestine (i) and unpaired uterus forming loops (u).
Fig. 6. A in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 6. A. Onchocerca flexuosa female: Typical curly body freed from nodule tissue by digestion. B. In comparison a female of O. jakutensis after the same digestive treatment.
Fig. 3 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 3. Onchocerca flexuosa: A. Head end of male. B. Spicules in situ with thorn like hook of right spicule protruded and tip of left spicule at proximal entrance of ventral groove of right spicule. C. Tail of male showing alae and distribution of papillae. D. Head end of female showing vulva with unpaired uterus, oesophagus-intestinal junction depicted and marked with dots at posterior end. Note loose course of uterus with loop. E. Head end of female with oesophagus and expansion of ovejector before vulva. F. Round tail end of female with spiky phasmid at base of flaps. G. Longitudinal section in posterior half of female body showing peculiar repetition of one bigger transversal cuticular ring (marked with dot at left), followed by two smaller rings. H, I. Microfilaria, in I in same scale as microfilaria in Fig. 10J as comparison.
Fig. 5 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 5. Onchocerca flexuosa: Protruding right spicule showing massive hook (H) at dorsal side and groove (G) at ventral side, serving as a gubernaculum to fine tip of left spicule. L: tip of left spicule; R: right spicule.
Fig. 2 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 2. Worm burden in situ of sternal skin in the process of digestion. Most of these worm fragments could be identified as Onchocerca skrjabini, no O. garmsi was found.
Fig. 1 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 1. Onchocerca skrjabini in situ in carpal skin. A. Freshly cut piece of skin shown from inside (note turned around piece of fur on top). Added methylene blue stains the O. skrjabini specimens and makes them visible for the naked eye. B. Parasitic burden in the same piece of skin in process of digestion. Hair follicles seen as dark dots. Fragments of O. skrjabini show different body width. Note very thin anterior headends (arrows). (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Fig. 12 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 12. Onchocerca skrjabini: two microfilariae protrude from broken frontal part of a female, showing very tight setting in small anterior body part in this species. Note subapical oval mark with protruding rim on head of microfilaria.
Fig. 11 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 11. Different body width of one specimen of Onchocerca skrjabini in comparison. Midbody at left, tapering part in the middle, thin anterior body at right. Note Onchocerca typical structure of cuticle with ridges on the surface and striae in medulla in ratio 1: 4.
Fig. 13 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 13. Onchocerca skrjabini female: cuticular ridges do not meet over the lateral line, they taper and disappear distant from each other.
Individual multilocus genotypes of three translocated and two source populations of Arnica montana in southern Belgium
<p>Individual multilocus genotypes based on nine microsatellite loci measured in the framework of a genetic monitoring of translocated populations of the critically endangered Arnica montana. See Van Rossum et al. (2020) in Molecular Ecology for more details.</p>
Individual multilocus genotypes of adults and seed progeny from eight natural populations of Campanula glomerata
<p>Individual multilocus genotypes based on 15 microsatellite loci of adults and seed progeny from eight natural populations of <em>Campanula glomerata</em>. For more details see Van Rossum et al. (2022) in Frontiers in Conservation Science</p>
New methods for the genotyping of Legionella pneumophila - Establishment, validation and implementation of a DNA-based microarray and a core genome multilocus sequence typing
<p>This data presented here are part a doctoral thesis with the focus on new genotyping methods for the human pathogen <em>Legionella pneumophila</em>. The data are partially published in articles. </p> <p>The thesis can be downloaded: update of the URL is coming soon</p>
Fig. 9 in Morphological description and multilocus genotyping of Onchocerca spp. in red deer (Cervus elaphus) in Switzerland
Fig. 9. Detail of Onchocerca flexuosa female: Uterine tubes (arrow) straightened inside curly body.
Individual multilocus genotypes of F1 seed progeny and recruits from two translocated populations of Campanula glomerata
<p>Individual multilocus genotypes for 15 microsatellite loci and spatial coordinates of F1 seed progeny and recruits from two translocated populations of <em>Campanula glomerata </em>from southern Belgium. For more information, see Van Rossum et al.(2023), Assessing spatial mating patterns in translocated populations of <em>Campanula glomerata, </em>in <em>Gobal Ecology and Conservation.</em></p> <p> </p> <p> </p>
Multilocus microsatellite genotypes and population geographical coordinates in the southern Damselfly (Coenagrion mercuriale)
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