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97 results for “OSM”
MOOD_2017_RoadDensity_OSM_ER
<p>Road density for unclassified, minor, major, and autoroutes 2017. </p> <p><strong>Abstract: </strong></p> <p>This dataset was produced by extracting all road data from national-level Open Steet Map archives for 2017. The length of each type of road was calculated for a series of 5 square km grids covering the MOOD study area.</p> <p> </p> <p> <br><strong>Projection + EPSG code:</strong><br>Latitude-Longitude/WGS84 (EPSG: 4326)<br><strong>Spatial extent:</strong><br>Extent -24.5705863176307275,23.6115332000000535 : 44.5127470157025726,73.0115332000000308<br><strong>Spatial resolution:</strong><br>0.0083333 deg (approx. 1000 m) <br><strong>Temporal resolution:</strong><br>The year 2017<br><strong>Pixel values:</strong><br> Km of road per square km <br><strong>Source: </strong><br>Open Street Map<br><strong>Software used:</strong><br>The software used for map production is ESRI ArcMap 10.8</p> <p><br><strong>License: </strong>CC-BY-SA 4.0<br><strong>Processed by:</strong><br>ERGO (Environmental Research Group Oxford) https://ergoonline.co.uk/ for the H2020 MOOD project</p>
OSM dataset for Quality Assurance paper
<p><strong>Dataset Title:</strong> OpenStreetMap Quality Assurance Dataset</p> <p><strong>Dataset Description:</strong> This dataset comprises OpenStreetMap (OSM) data obtained from the Dublin area in 2023, specifically for quality assurance purposes. The dataset contains a diverse range of geospatial information, meticulously sourced from OSM through the Overpass API.</p> <p><strong>Data Source:</strong> The primary source of this dataset is OpenStreetMap, accessed via the Overpass API. It encompasses a wide array of geospatial features and attributes contributed by the OSM community.</p> <p><strong>Data Format:</strong> The dataset is formatted in GeoJSON, a widely used and versatile format for representing geospatial data.</p> <p><strong>Data Size:</strong> The dataset encompasses 471 individual records, collectively forming a comprehensive representation of the Dublin area within the scope of the year 2023.</p> <p><strong>Data License:</strong> The dataset is released under the Open Database License (ODbL), ensuring openness and accessibility to users while respecting OSM's data sharing principles.</p> <p><strong>Temporal and Spatial Coverage:</strong> The dataset captures geospatial information within the vibrant city of Dublin, offering a snapshot of the region during the year 2023. It provides valuable insights into the dynamic nature of the city's geographical data.</p> <p>This dataset serves as a valuable resource for quality assurance and evaluation of geospatial data within the Dublin area. Researchers, GIS professionals, and the broader OSM community can utilize it for a variety of spatial analysis and data quality assessment tasks.</p> <p> </p> <p> </p> <p> </p>
OSM Businesses & Organizations
<p>A collection of business and organization Points of Interest. The dataset has been produced by the SmartDataLake project (<a href="https://smartdatalake.eu">https://smartdatalake.eu</a>), using data collected from OpenStreetMap (<a href="https://www.openstreetmap.org">https://www.openstreetmap.org</a>).</p>
Live-Cell Imaging of MCF10A Cells Treated individually or in combination with EGF, OSM, or TGFB
<p>MCF10A cell culture and experimental procedures were conducted based on established methodologies (10.1038/s42003-022-03975-9). For routine maintenance and passaging, cells were cultured in a growth medium composed of DMEM/F12 (Invitrogen, #11330-032) supplemented with 5% horse serum (Sigma, #H1138), 20 ng/ml EGF (R&D Systems, #236-EG), 0.5 µg/ml hydrocortisone (Sigma, #H-4001), 100 ng/ml cholera toxin (Sigma, #C8052), 10 µg/ml insulin (Sigma, #I9278), and 1% Penicillin/Streptomycin (Invitrogen, #15070-063). For experiments involving EGF perturbation, a growth factor-free medium was prepared using DMEM/F12, 5% horse serum, 0.5 µg/ml hydrocortisone, 100 ng/ml cholera toxin, and 1% Pen/Strep.</p> <p>Cells were cultured to 50–80% confluency before being detached with 0.05% trypsin-EDTA (Thermo Fisher Scientific, #25300-054). Subsequently, 20,000 cells were seeded into 24-well plates (Thermo Fisher Scientific, #267062) coated with collagen-1 (Cultrex, #3442-050-01) in growth medium.<span>After an 18-hour incubation in the new media, cells were treated with </span><span>single </span><span>ligand</span><span> or </span><span>combinations of ligands</span><span> in fresh growth factor-free media: 10 ng/ml EGF (R&D Systems #236-EG), 10 ng/ml OSM (R&D Systems #8475-OM), and 10 ng/ml TGFβ (R&D Systems #240-B).</span></p> <p>Phenotypic responses to individual and combination treatment with EGF, OSM, and TGFB treatment were assessed through live-cell imaging using the Incucyte S3 microscope (Essen BioScience, #4647), which captured images every 30 minutes over a 24-hour period. The dataset includes an Excel spreadsheet that documents the experimental conditions for each imaged well.</p> <p>Companion RNAseq <span><span>can be accessed from the Gene Expression Omnibus</span><span>: </span><span>GSE282654</span><span>.</span></span><span> </span></p>
Datasets of addresses in the Netherlands: integration of BAG and OSM
<p>This integrated dataset contains location and basic description of addresses in the Netherlands and uses, as original sources of information, the Dutch cadastre of addresses and buildings (BAG: Basisregistratie Adressen en Gebouwen and OpenStreetMap.</p> <p>Extensive information of source datasets and procedures for their integration are described at https://github.com/alesarrett/dataIntegration_OSM-authoritative</p> <p>The authors acknowledge the support of the European Commission - Joint Research Centre (JRC) through contract number CT-EX2013D133588-101, entitled “Evaluation of Novel approaches for governing (location) data and technology. Combined use of public sector and citizen-generated data”.</p>
OSM buildings noisy labels dataset
<p>This dataset contains tile imagery from the OpenStreetMap project alongside label masks for buildings from OpenStreetMap. Besides the original clean label set, additional noisy label sets for random noise, removed and added buildings are provided.</p> <p>The purpose of this dataset is to provide training data for analysing the impact of noisy labels on the performance of models for semantic segmentation in Earth observation.</p> <p>The code for downloading and creating the datasets as well as for performing some preliminary analyses is also provided, however it is necessary to have access to a tile server where OpenStreetMap tiles can be downloaded in sufficient amounts.</p> <p>To reproduce the dataset and perform analysis on it, do the following:</p> <ul> <li>unzip data.zip and code.zip</li> <li>create the folder structure from data</li> <li>Build and activate a python environment from environment.yml</li> <li>Insert the url of a suitable tile server for OSM tiles in line 76 of utils.py</li> <li>Execute download_OSM_dataset.py to download OSM image tiles alongside OSM labels</li> <li>Execute create_noisy_labels.py for the OSM dataset to create noisy label sets</li> <li>Divide the images and labels into train and test data. split_data.py can be used as a baseline for this, but pathnames have to be adjusted and the corresponding directories have to be created first.</li> <li>Call train_model.py to train a model on the data. Specify the data size and the label set by giving command line arguments as shown in train_model.sh</li> </ul> <p> </p> <p> </p> <p> </p> <p> </p> <p> </p> <p> </p>
The ScaleMaster: The decompostion of Pan-Scalar, Interactive Map (OSM,Google Maps,IGN scan)
<p>The ScaleMaster diagram of Brewer and Buttenfield, "where the scaleLine replaces the timeLine", is a formal tool (Excel sheets) designed to formalize the rules for manual map design and "emphasize changes to the map display" . Inspired by Brewer and Buttenfield, we use ScaleMaster to standardize and formalize changes while zooming and exploring each of pan-scalar map (OSM,Google Maps,Scan IGN). In our methodology, however, we go a step further. The timeline of exploration is also examined in addition to the scaleline of zooming. We focus on map design practices that account for pan-scalar map exploration. For example, we account for generalization changes between scales based on empirically or theoretically justifiable reasons.</p> <p>we use ScaleMaster to analyze particular and common geographic entities in the maps (including rivers, urban areas, bus stations, and administrative borders) representing but a fraction of all map ontologies (e.g., water, roads, transportation networks, relief, points-of-interest, vegetation, administrative districts). We constructed a ScaleMaster for each of the three pan-scalar maps (OSM, Google Map, Scan IGN). </p> <p>Our hope is that this first analysis, and the resulting categories below, will lead to critique, comment, and iterative improvement in the future. In other words, our initial findings are just that – outcomes that further exploration on pan-scalar maps can add to, revise, and improve upon. </p>
Georeferentiation of CORE-TSO substations with OSM
<p>The data is in the form of a CSV table that identifies the components of the transmission grid operators (substations, transformers, and lines) in AT, BE, CZ, DE, FR, HU, HR, LU, NL, PL, RO, SI, and SK given in the Core-TSO data: https://www.jao.eu/staticgrid-model, second release, with OpenStreetMap (OSM) objects. The table was produced by geolocating the substations. To this purpose, the packages https://gitlab.com/dlr-ve-esy/esy-osm-pbf and https://gitlab.com/dlr-ve-esy/esy-osm-shape were used to extract the data from OSM and the package https://github.com/seatgeek/fuzzywuzzy was used to match the names of the substations in Core-TSO data and OSM. The value of this table is that one can produce models of the extra high voltage grid with highly reliable technical data (from Core-TSO) and precise coherent geolocations (from OSM). Additionally, a PyPSA network is created from the table (including buses, lines and transformers as well as the components not used to create the network). A detailed documentation is provided in a separate PDF file.<br> </p>
CX10 osm-9(ky10)IV | 2010-07-06T11:23:04+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=wREPejPGlpk</li> <li><b>strain</b> : CX10</li> <li><b>timestamp</b> : 2010-07-06T11:23:04+01:00</li> <li><b>gene</b> : osm-9</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10</li> <li><b>strain_description</b> : osm-9(ky10)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : osm-9 (ky10) on food L_2010_07_06__11_23_04___1___5</li> <li><b>total time (s)</b> : 898.404</li> <li><b>frames per second</b> : 25.641</li> <li><b>video micrometers per pixel</b> : 4.36527</li> <li><b>number of segmented skeletons</b> : 19408</li> </ul>
CX10 osm-9(ky10)IV | 2010-07-08T11:23:23+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=IFgpL6nx4X0</li> <li><b>strain</b> : CX10</li> <li><b>timestamp</b> : 2010-07-08T11:23:23+01:00</li> <li><b>gene</b> : osm-9</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10</li> <li><b>strain_description</b> : osm-9(ky10)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : osm-9 (ky10) on food L_2010_07_08__11_23_23___1___4</li> <li><b>total time (s)</b> : 899.074</li> <li><b>frames per second</b> : 25.7732</li> <li><b>video micrometers per pixel</b> : 4.36527</li> <li><b>number of segmented skeletons</b> : 19492</li> </ul>
CX10 osm-9(ky10)IV | 2010-06-15T14:54:50+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=VBY3KwbUvoQ</li> <li><b>strain</b> : CX10</li> <li><b>timestamp</b> : 2010-06-15T14:54:50+01:00</li> <li><b>gene</b> : osm-9</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10</li> <li><b>strain_description</b> : osm-9(ky10)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : osm-9 (ky10) on food L_2010_06_15__14_54_50___1___8</li> <li><b>total time (s)</b> : 899.543</li> <li><b>frames per second</b> : 25.8398</li> <li><b>video micrometers per pixel</b> : 4.29558</li> <li><b>number of segmented skeletons</b> : 19224</li> </ul>
AQ1422 osm-9(ky10); trpa-1(ok999)IV | 2010-04-30T11:52:26+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=FQjdYNS8-X0</li> <li><b>strain</b> : AQ1422</li> <li><b>timestamp</b> : 2010-04-30T11:52:26+01:00</li> <li><b>gene</b> : osm-9;trpa-1</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10;ok999</li> <li><b>strain_description</b> : osm-9(ky10); trpa-1(ok999)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : no food</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : trpa-1 (ok999); osm-9 (ky10) off food_2010_04_30__11_52_26___8___2</li> <li><b>total time (s)</b> : 119.726</li> <li><b>frames per second</b> : 26.3852</li> <li><b>video micrometers per pixel</b> : 4.20853</li> <li><b>number of segmented skeletons</b> : 2688</li> </ul>
AQ1422 osm-9(ky10); trpa-1(ok999)IV | 2010-04-30T12:15:56+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=RYC-RnsBwB4</li> <li><b>strain</b> : AQ1422</li> <li><b>timestamp</b> : 2010-04-30T12:15:56+01:00</li> <li><b>gene</b> : osm-9;trpa-1</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10;ok999</li> <li><b>strain_description</b> : osm-9(ky10); trpa-1(ok999)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : no food</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : trpa-1 (ok999); osm-9 (ky10) off food_2010_04_30__12_15_56___8___3</li> <li><b>total time (s)</b> : 119.802</li> <li><b>frames per second</b> : 26.1097</li> <li><b>video micrometers per pixel</b> : 4.20853</li> <li><b>number of segmented skeletons</b> : 2761</li> </ul>
CX10 osm-9(ky10)IV | 2010-07-08T11:26:19+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=-K6ofgJ8534</li> <li><b>strain</b> : CX10</li> <li><b>timestamp</b> : 2010-07-08T11:26:19+01:00</li> <li><b>gene</b> : osm-9</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10</li> <li><b>strain_description</b> : osm-9(ky10)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : osm-9 (ky10) on food R_2010_07_08__11_26_19___8___4</li> <li><b>total time (s)</b> : 899.456</li> <li><b>frames per second</b> : 25.5754</li> <li><b>video micrometers per pixel</b> : 4.52963</li> <li><b>number of segmented skeletons</b> : 19255</li> </ul>
AQ1422 osm-9(ky10); trpa-1(ok999)IV | 2010-04-22T11:09:54+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=FnW1xI1fzwY</li> <li><b>strain</b> : AQ1422</li> <li><b>timestamp</b> : 2010-04-22T11:09:54+01:00</li> <li><b>gene</b> : osm-9;trpa-1</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10;ok999</li> <li><b>strain_description</b> : osm-9(ky10); trpa-1(ok999)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : trpa-1 (ok999); osm-9 (ky10) on food L_2010_04_22__11_09_54___8___6</li> <li><b>total time (s)</b> : 898.482</li> <li><b>frames per second</b> : 25.641</li> <li><b>video micrometers per pixel</b> : 4.20853</li> <li><b>number of segmented skeletons</b> : 19539</li> </ul>
AQ1422 osm-9(ky10); trpa-1(ok999)IV | 2010-04-21T14:39:48+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=DAJh66Ux4z8</li> <li><b>strain</b> : AQ1422</li> <li><b>timestamp</b> : 2010-04-21T14:39:48+01:00</li> <li><b>gene</b> : osm-9;trpa-1</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10;ok999</li> <li><b>strain_description</b> : osm-9(ky10); trpa-1(ok999)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : trpa-1 ((ok999); osm-9 (ky10) on food L_2010_04_21__14_39_48___8___9</li> <li><b>total time (s)</b> : 897.987</li> <li><b>frames per second</b> : 25.7732</li> <li><b>video micrometers per pixel</b> : 4.20853</li> <li><b>number of segmented skeletons</b> : 19038</li> </ul>
AQ1422 osm-9(ky10); trpa-1(ok999)IV | 2010-04-22T11:10:39+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=djhTEAnfdj8</li> <li><b>strain</b> : AQ1422</li> <li><b>timestamp</b> : 2010-04-22T11:10:39+01:00</li> <li><b>gene</b> : osm-9;trpa-1</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10;ok999</li> <li><b>strain_description</b> : osm-9(ky10); trpa-1(ok999)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : trpa-1 (ok999); osm-9 (ky10) on food R_2010_04_22__11_10_39__6</li> <li><b>total time (s)</b> : 897.882</li> <li><b>frames per second</b> : 31.6456</li> <li><b>video micrometers per pixel</b> : 4.3011</li> <li><b>number of segmented skeletons</b> : 19734</li> </ul>
CX10 osm-9(ky10)IV | 2010-07-08T11:26:58+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=YILWijA7sug</li> <li><b>strain</b> : CX10</li> <li><b>timestamp</b> : 2010-07-08T11:26:58+01:00</li> <li><b>gene</b> : osm-9</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10</li> <li><b>strain_description</b> : osm-9(ky10)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : osm-9 (ky10) on food L_2010_07_08__11_26_58__4</li> <li><b>total time (s)</b> : 897.948</li> <li><b>frames per second</b> : 25.7732</li> <li><b>video micrometers per pixel</b> : 4.56732</li> <li><b>number of segmented skeletons</b> : 19990</li> </ul>
AQ1422 osm-9(ky10); trpa-1(ok999)IV | 2010-04-30T11:50:34+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=WarYepL98JY</li> <li><b>strain</b> : AQ1422</li> <li><b>timestamp</b> : 2010-04-30T11:50:34+01:00</li> <li><b>gene</b> : osm-9;trpa-1</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10;ok999</li> <li><b>strain_description</b> : osm-9(ky10); trpa-1(ok999)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : unknown</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : no food</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : trpa-1 (ok999); osm-9 (ky10) off food_2010_04_30__11_50_34___4___2</li> <li><b>total time (s)</b> : 119.802</li> <li><b>frames per second</b> : 25.5754</li> <li><b>video micrometers per pixel</b> : 4.7068</li> <li><b>number of segmented skeletons</b> : 2721</li> </ul>
AQ1422 osm-9(ky10); trpa-1(ok999)IV | 2010-04-23T16:17:09+01:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=eBekVJWqxpQ</li> <li><b>strain</b> : AQ1422</li> <li><b>timestamp</b> : 2010-04-23T16:17:09+01:00</li> <li><b>gene</b> : osm-9;trpa-1</li> <li><b>chromosome</b> : IV</li> <li><b>allele</b> : ky10;ok999</li> <li><b>strain_description</b> : osm-9(ky10); trpa-1(ok999)IV</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : trp-a-1 (ok999); osm-9 (ky10) on food L_2010_04_23__16_17_09___4___15</li> <li><b>total time (s)</b> : 899.973</li> <li><b>frames per second</b> : 25.6141</li> <li><b>video micrometers per pixel</b> : 4.7068</li> <li><b>number of segmented skeletons</b> : 18936</li> </ul>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.