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7 results for “Octodontomys”
On following pages: 4. Chalchalero Viscacha Rat (Salinoctomys loschalchalerosorum); 5. Common Viscacha Rat (Octomys mimax); 6. Mountain Degu (Octodontomys gliroides); 7. Bridges's Degu (Octodon bridgesii); 8. Pacific Degu (Octodon pacificus); 9. Coastal Degu (Octodon lunatus); 10. Common Degu (Octodon degus); 11. Porter's Rock Rat (Aconaemys porteri); 12. Chilean Rock Rat (Aconaemys fuscus); 13. Sage's Rock Rat (Aconaemys sage), in Octodontidae
On following pages: 4. Chalchalero Viscacha Rat (Salinoctomys loschalchalerosorum); 5. Common Viscacha Rat (Octomys mimax); 6. Mountain Degu (Octodontomys gliroides); 7. Bridges's Degu (Octodon bridgesii); 8. Pacific Degu (Octodon pacificus); 9. Coastal Degu (Octodon lunatus); 10. Common Degu (Octodon degus); 11. Porter's Rock Rat (Aconaemys porteri); 12. Chilean Rock Rat (Aconaemys fuscus); 13. Sage's Rock Rat (Aconaemys sage),
On following pages: 4. Chalchalero Viscacha Rat (Salinoctomys loschalchalerosorum); 5. Common Viscacha Rat (Octomys mimax); 6. Mountain Degu (Octodontomys gliroides); 7. Bridges's Degu (Octodon bridgesii); 8. Pacific Degu (Octodon pacificus); 9. Coastal Degu (Octodon lunatus); 10. Common Degu (Octodon degus); 11. Porter's Rock Rat (Aconaemys porteri); 12. Chilean Rock Rat (Aconaemys fuscus); 13. Sage's Rock Rat (Aconaemys sage), 14. Coruro (Spalacopus cyanus). in Octodontidae
On following pages: 4. Chalchalero Viscacha Rat (Salinoctomys loschalchalerosorum); 5. Common Viscacha Rat (Octomys mimax); 6. Mountain Degu (Octodontomys gliroides); 7. Bridges's Degu (Octodon bridgesii); 8. Pacific Degu (Octodon pacificus); 9. Coastal Degu (Octodon lunatus); 10. Common Degu (Octodon degus); 11. Porter's Rock Rat (Aconaemys porteri); 12. Chilean Rock Rat (Aconaemys fuscus); 13. Sage's Rock Rat (Aconaemys sage), 14. Coruro (Spalacopus cyanus).
Figure 3 in Phylogeography and demographic history of the Andean degu, Octodontomys gliroides (Rodentia: Octodontidae)
Figure 3. Map of cluster membership and posterior probability for each cluster based on the GENELAND analysis. A, the estimated cluster membership represents the modal cluster assignment of each pixel, and the rest of the inset maps show the posterior probability of individuals of Octodontomys gliroides in Argentina, Bolivia, and Chile. Black dots represent sampling localities. The three clusters are: B, populations of northern and central Bolivia; C, populations from northern Chile, central and southern Bolivia, and northern Argentina; and D, the remaining Argentinian populations and one population from southern Bolivia. The white area represents a probability between 90 and 100% for sampling localities to belong to their respective cluster.
Figure 5 in Phylogeography and demographic history of the Andean degu, Octodontomys gliroides (Rodentia: Octodontidae)
Figure 5. Map, showing the putative barriers (major rivers, lakes, salt flats, the Atacama Desert, and the mountain chains of the Andes) that separate the populations of Octodontomys gliroides.
Figure 4 in Phylogeography and demographic history of the Andean degu, Octodontomys gliroides (Rodentia: Octodontidae)
Figure 4. Pairwise mismatch distribution (left) and Bayesian skyline plots (right), depicting the demographic history for the entire sample (A and B), lineage A (C and D), and lineage B (E and F). For mismatch distributions, black circles represent the observed distribution of pairwise differences and white circles represent the theoretical expected distribution under a population expansion model. For the skyline plot, black lines represent median estimates, whereas the dotted lines represent the upper and lower 95% credible intervals. The x-axis of Bayesian skyline figures is the time per million years before the present and the y-axis is the estimated effective population size (Ne).
Figure 2. A in Phylogeography and demographic history of the Andean degu, Octodontomys gliroides (Rodentia: Octodontidae)
Figure 2. A, geographical location of the sampled populations along its distributional range (for abbreviations of localities, see Table 1), and results of the BARRIER analysis. Pie charts display the frequency of occurrence of each haplotype in each locality; the size of the pie chart is proportional to population size. The genetic barriers in red are numbered (in Roman numerals) and the thickness is proportional to the ratio between genetic distance values between populations on both sides of each barrier to the average genetic distance among populations in the whole data set. The populations inside unfilled irregular shapes are the populations pooled by the BARRIER analysis (for more detail, see Material and methods). B, the four major genetic boundaries (thick colored lines) detected by BARRIER 2.2 using FST values. The order of the numerical pairs represents the sequence of the boundary formation. The black dots correspond to the population numbers plotted along the ordination (some populations were pooled by the analysis). The dashed lines and solid lines represent the Voronoi tessellation and the Delaunay triangulation, respectively.
Figure 1. A in Phylogeography and demographic history of the Andean degu, Octodontomys gliroides (Rodentia: Octodontidae)
Figure 1. A, phylogenetic relationships within the principal nodes for Octodontomys gliroides, based on Bayesian analysis of mtDNA control region haplotypes. Divergence dates of the most recent common ancestor in million years (above the branches), 95% credible intervals (below the branches), and nodes with high posterior probability (below the 95% credible intervals) are shown. The two main lineages are indicated by black and red lines, and the sublineages found in lineage A, referred to in the text as A1 and A2, respectively, are coloured as follow: sublineage A1, blue; sublineage A2, green. B, haplotype network recovered by statistical parsimony analysis. Each circle represents a different haplotype with size proportional to frequencies, with the largest circles representing the most abundant haplotypes. The coloration pattern of each haplotype represents the lineages and sublineages recovered in the phylogenetic analysis. White circles denote the number of mutational steps between haplotypes. For geographical details of sampling populations and haplotype codes, see Table 1.
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