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ShareScore release 0.9.0
Dataset results
2 results for “Parallel tool”
IMPACT HTA, WP7 (Methodological tools using multi-criteria value methods for HTA decision-making), Task 2 (Multi-criteria evaluation framework), Results of the 1st Web-Delphi process to HTA stakeholders, organized into 6 separate parallel panels
<p>IMPACT HTA, WP7 (Methodological tools using multi-criteria value methods for HTA decision-making), Task 2 (Multi-criteria evaluation framework), Results of the 1<sup>st</sup> Web-Delphi process to HTA stakeholders, organized into 6 separate parallel panels (one panel per stakeholder group, 2 rounds), about the views of stakeholders regarding “This aspect should be considered in the evaluation of new medicines on a common basis” (2019)</p> <p>For details on the Web-Delphi process, see: IMPACT HTA, Work Package 7 (Methodological tools using multi-criteria value methods for HTA decision-making), Task 2, Deliverable 7.2 (Multi-criteria evaluation framework), Advancing knowledge and MCDA tools to assist HTA agencies in evaluating medicines on a common basis (2021) Oliveira, M.D. (IST), Panos Kanavos (LSE), Bana e Costa, C. (IST)</p>
MADDD-seq, a novel massively parallel sequencing tool for simultaneous detection of DNA damage and mutations
<p>The file "data.tar" contains the output of the MADDD-seq pipepline. There is one sub-folder per sample. For each sample, the most important files are:</p> <ul> <li>max_variants_2.adduct.gtf : A GTF file with the location (and details) about each adduct called by the pipepline</li> <li>max_variants_2.DSC.vcf.gz : A VCF (Variant Call File) with information about mutations called.</li> <li>coverage.rds : pre-computed coverage information in binary format to be loaded in R.</li> </ul> <p>To analyze this data, use the following R files: adducts.R, mutations.R and jason-function-2022-04.R</p> <p> </p> <p>The file "kallisto-h5.tar" contains the output of running Kallisto on the regular RNAseq data (for expression level analysis). To analyze this data, use the following R files: Yeast-MNNG-MGT.Rmd and myDESeq2.R</p> <p> </p> <p>The source code of the R files will need to be modified to point at the location of files on the computer being used. These modifications are pointed by comments in the code and are located towards the start of each file.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.