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3 results for “Program Invariants”

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zenodo32/100

Inference and Test Generation Using Program Invariants in Chemical Reaction Networks Artifacts

<p>The artifacts for&nbsp;Inference and Test Generation Using Program Invariants in Chemical Reaction Networks, published at ICSE 2022.</p> <p>The pdf of the paper can be accessed at <a href="https://ieeexplore.ieee.org/document/9794130">IEEEXplore</a>.</p> <p><strong>To cite this work, please use the citation below:</strong></p> <pre>@INPROCEEDINGS{GertenICSE22, author={Gerten, Michael C. and Marsh, Alexis L. and Lathrop, James I. and Cohen, Myra B. and Miner, Andrew S. and Klinge, Titus H.},&nbsp; booktitle={2022 IEEE/ACM 44th International Conference on Software Engineering (ICSE)}, &nbsp;&nbsp; title={Inference and Test Generation Using Program Invariants in Chemical Reaction Networks}, month={May},&nbsp;&nbsp; year={2022},&nbsp; pages={1193-1205}, doi={10.1145/3510003.3510176}}</pre> <p>The artifacts are also available on <a href="https://github.com/LavaOps/ICSE-2022-Artifacts">GitHub</a>.</p> <p><strong>This is an updated version of the ChemFlow tool. The update addressed an overflow error when computing gaussian elimination that could result in incorrect invariants with certain model inputs. After verification, all models in this work were not affected by this bug and have the same set of invariants generated by both versions. We have updated the docker file to use the new code as well.</strong></p>

openapache2.0Jan 2022View details →
geo24/100

Global epigenetic stability of liver-resident invariant natural killer T cells in response to cues capable of inducing transcriptional re-programming

GEO Series GSE250192. Mus musculus. 24 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenOct 2024View details →
geo20/100

Comparative transcriptomes reveal pro-survival and cytotoxic programs of mucosal-associated invariant T cells upon Bacillus Calmette–Guérin stimulation

GEO Series GSE228089. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record