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4 results for “TEB”
Data archive for paper "WRF‐TEB: Implementation and Evaluation of the Coupled Weather Research and Forecasting (WRF) and Town Energy Balance (TEB) Model"
<p><strong>WRF-TEB data archive</strong></p> <p>This archive contains data and tools to reproduce results as included in <a href="https://doi.org/10.1029/2019ms001961">Meyer et al. (2020)</a>.</p> <p><strong>Prerequisites</strong></p> <ul> <li><a href="https://sylabs.io/">Singularity</a> version >= 3.</li> </ul> <p><strong>Usage</strong></p> <p>To run all models and plotting scripts included in integration test and meteorological evaluation, run the following command from your command-line interface.</p> <pre><code>NPROC=8 TYPE=evaluate tools/singularity/run.sh</code></pre> <p>where <code>NPROC=8</code> is the maximum number of processes to use. The output can be found in the <code>work/</code> folder.</p> <p><strong>HPC</strong></p> <p>If you want to use this in an HPC environment, use <code>tools/hpc</code> as a template. As an example, to run the evaluation on Imperial HPC using PBS (Portable Batch System), use:</p> <pre><code>qsub -v REPO_ROOT=$(pwd),TYPE=evaluate tools/hpc/job_imperial.sh</code></pre> <p><strong>Copyright and License</strong></p> <p>Copyright and licensing information are included at the top of source files or as separate files in folders.</p> <p><strong>References</strong></p> <p>Meyer, D., Schoetter, R., Riechert, M., Verrelle, A., Tewari, M., Dudhia, J., Masson, V., Reeuwijk, M., & Grimmond, S. (2020). WRF‐TEB: implementation and evaluation of the coupled Weather Research and Forecasting (WRF) and Town Energy Balance (TEB) model. Journal of Advances in Modeling Earth Systems. <a href="https://doi.org/10.1029/2019ms001961">https://doi.org/10.1029/2019ms001961</a></p>
RNA-sequencing of mammary epithelial cells from pubertal mice following enrichment of mammary ductal tissue or terminal end buds (TEBs).
GEO Series GSE268664. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Retinal Cell Type Epigenetic Memory Predicts Reprogramming Efficiency and Retinogenesis in 3D Organoid Cultures [TEBS_Mm]
GEO Series GSE109714. Mus musculus. 31 samples. Type: Methylation profiling by high throughput sequencing.
Time course gene expression profiling of mouse mammary gland TEB and duct cells throughout branching morphogenesis
GEO Series GSE57724. Mus musculus. 50 samples. Type: Expression profiling by array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.