Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
46
datasets available to search
ShareScore release 0.9.0
Dataset results
46 results for “Xylaria”
FIGURE 3 in Xylaria sridharii sp. nov.-a new species of Xylariaceae from India
FIGURE 3. ML tree with 1000 bootstrap values based on analysis of a combined dataset of ITS & TUB2 for the species of Xylaria constructed using the Tamura 3-parameter method in MEGAX. Bootstrap support values ≥ 50 % are at the nodes. Poronia pileiformis WSP 88113001 was used as an outgroup. The phylogenetic position of Xylaria sridharii is indicated in red font.
FIGURE 2. A–B—Stromata with the branched structure without a in Xylaria sridharii sp. nov.-a new species of Xylariaceae from India
FIGURE 2. A–B—Stromata with the branched structure without a hair-like appendage at the apical tip; C–D—cross-section of stromata showing the perithecia with ascocarp and ascospores; E—young immature ascocarp with ascospores; F & G—matured ascocarp with ascospores of Xylaria sridharii (Scale: A & B—100 µm; C–E—50 µm; F & G—20 µm).
FIGURE 1 in Xylaria sridharii sp. nov.-a new species of Xylariaceae from India
FIGURE 1. Location from where the holotype specimen was collected (Konaje); B–E—Xylaria sridharii developed on the lamina of Coconut leaflet; F—cross-section of stromata (basal bulbous region showing the arrangement of perithecia); G–I—Pure culture of X. sridharii (NFCCI 5117) on PDA medium (12 days old; G & H front view; I reverse view).
Phylogeny and taxonomic of Xylaria associated with fallen fruits and seeds in China
<p>Supplementary files are the compressed files of original images of Xylaria species in the manuscript, they are uploaded for review purpose only.</p>
FIGURE 5 in Morphology and phylogeny reveal two novel Xylaria (Xylariaceae) species from China
FIGURE 5. Xylaria wuzhishanensis (GMB0074, holotype). A–B. Stromata on the surface of host. C. Close-up of stromata surface, ostioles in red arrow. D. Transverse section of stroma. E. Longitudinal section of stroma. F. Ascus apex with a J+, apical ring (stained in Melzer's reagent). G. Culture on OA from above and below. H–J. Asci with ascospores. K, L. Ascospores. M. Ascospores with indehiscent perispore in 10% KOH. Scale bars: B = 3 mm, C–E = 200 μm, F, H–M = 10 μm.
FIGURE 3 in Morphology and phylogeny reveal two novel Xylaria (Xylariaceae) species from China
FIGURE 3. Xylaria cubensis (GMB0075). A. Stromata on the surface of host. B. Stroma. C. Close-up of stroma. D. Transverse section of stroma. E. Longitudinal section of stroma. F. Culture on OA from above and below. G–I. Asci with ascospores. J. Ascus apex with a J+, apical ring (stained in Melzer's reagent). K–M. Ascospores. N. Ascospores with indehiscent perispore in 10% KOH. Scale bars: B = 500 μm, C = 200 μm, D, E = 150 μm, G–N = 10 μm.
FIGURE 4 in Morphology and phylogeny reveal two novel Xylaria (Xylariaceae) species from China
FIGURE 4. Xylaria sylvatica (GMB0076, holotype). A. Stromata on the surface of host. B. Stroma. C. Close-up of stromata surface, ostioles in red arrow. D. Transverse section of stroma. E. Longitudinal section of stroma. F. Culture on OA from above. G. Culture on OA from below. H–J. Asci with ascospores. K. Ascus apex with a J+, apical ring (stained in Melzer's reagent). L, M. Ascospores with germ slits. N. Ascospores with indehiscent perispore in 10% KOH. Scale bars: B = 3 mm, C–E = 200 μm, H–N = 10 μm.
FIGURE 1 in Morphology and phylogeny reveal two novel Xylaria (Xylariaceae) species from China
FIGURE 1. RAxML tree based on analysis of a combined dataset of β-tubulin, rpb2 and α-actin sequence dataset from selected species of Xylariales. Bootstrap support values for maximum likelihood (ML) greater than 50%, and Bayesian posterior probabilities (BYPP) greater than 0.90 are given at the nodes. Strain numbers are noted after the species names. Ex-type strains are in bold. Newly generated taxa are in red. The tree is rooted to the outgroup of Camillea obularia (ATCC 28093).
FIGURE 2 in Morphology and phylogeny reveal two novel Xylaria (Xylariaceae) species from China
FIGURE 2. Xylaria atrosphaerica (GMB0077). A. Stromata on the surface of host. B. Close-up of stromata surface. C. Transverse section of stroma. D. Longitudinal section of stroma. E. Ascus apex with a J+, apical ring (stained in Melzer's reagent). F. Culture on OA from above. G. Culture on OA from below. H–J. Asci with ascospores. K–N. Ascospores. O. Ascospores with indehiscent perispore in 10% KOH. Scale bars: B = 200 μm, C, D = 150 μm, E= 10 μm, H–O = 10 μm.
FIGURE 4 in Two penzigioid Xylaria species described from China based on morphological and molecular characters
FIGURE 4. Xylaira sibirica (FCATAS764). A. Ascus in Melzer's reagent. B. Ascus in water. C. Ascospores in water. D. Ascus apical ring in Melzer's reagent. E,F. Ascospore with germ slit. G. Ascospore. Scale is indicated by bars (A,C,D = 10 µm; B,E–G = 5 µm).
FIGURE 3 in Two penzigioid Xylaria species described from China based on morphological and molecular characters
FIGURE 3. Xylaira sibirica (FCATAS764). A,B. Stromatal habit. C. Close-up view of stromatal surface, showing perithecial mounds and ostiolar disks. D. Section through stroma, showing perithecia. Scale is indicated by bars (A = 1 mm; B,D = 0.5 mm; C = 0.2mm).
FIGURE 2 in Two penzigioid Xylaria species described from China based on morphological and molecular characters
FIGURE 2. Xylaira acericola (FCATAS838, Holotype). A,B. Asci in water. C. Ascospores in water. D,E. Ascus apical ring in Melzer's reagent. F–I. Ascospore with germ slit. Scale is indicated by bars (A= 20 µm; B–I = 10 µm).
FIGURE 1 in Two penzigioid Xylaria species described from China based on morphological and molecular characters
FIGURE 1. Xylaira acericola(FCATAS838, Holotype). A,C. Stromatal habit. B. Close-up view of stromatal surface, showing perithecial mounds and ostiolar disks. D. Section through stroma, showing perithecia. Scale is indicated by bars (A = 2 mm; B,D = 0.5 mm; C = 1mm).
FIGURE 5 in Two penzigioid Xylaria species described from China based on morphological and molecular characters
FIGURE 5. Strict consensus tree obtained from Bayesian and RaxML analyses of ITS and β-tub sequences of Xylaria and allied genera in Xylariaceae. Bayesian posterior probabilities (≥0.95, before the slash markers) and RaxML bootstrap values (≥50, after the slash markers) are shown.
FIGURE 1 in The genus Xylaria (Xylariaceae) in the south of China-6. A new Xylaria species based on morphological and molecular characters
FIGURE 1. Xylaria fusispora (from holotype): a. Stromata; b. Stromatal surface; c. Ascospores; d. Asci; e. Ascospore bearing appendage; f. Germ slit; g. Ascus apical ring; h. Ascospore by scanning-electron microscopy; i. Colony on OA after 4 weeks of incubation. Scale bars: a = 5 mm, b = 0.5 mm, c,d = 20 µm, e,f = 5 µm, g,i = 15 µm.
FIGURE 2 in The genus Xylaria (Xylariaceae) in the south of China-6. A new Xylaria species based on morphological and molecular characters
FIGURE 2. Strict consensus tree illustrating the phylogeny of Xylaria fusispora and selected Xylaria species generated by maximumlikelihood, maximum-parsimony and neighbour-joining analyses based on ITS sequences. Hypoxylon fragiforme and Camillea obularia were used as outgroup taxa. Name in bold indicates the new species. The bootstrap values (>50%) of maximum-likelihood, maximum-parsimony and neighbor-joining analyses of 1000 resampled datasets are shown (ML/MP/NJ).
Fig. 6 in Bioactive specialised metabolites from the endophytic fungus Xylaria sp. of Cudrania tricuspidata
Fig. 6. Inhibitory activity of compounds 1c and 8 against NO production in RAW 264.7 cells. Cells were tread with various concentrations of compounds along with LPS (1 μg/mL) for 24 h, and the accumulation of nitrite was evaluated by Griess reagent. Values were presented as mean ± SD from three independent experiments. **P <0.01, ***P <0.001. Column: relative NO level; Dot: cell viability. C: control.
Fig. 7 in Xylarinaps A-E, five pairs of naphthalenone derivatives with neuroprotective activities from Xylaria nigripes
Fig. 7. Effects of compounds 1–5 on SOD in OGD-induced PC12 cells. The values represent mean ± SD (n = 6). *P <0.05, **P <0.01 vs. the control group; #P <0.05, ##P <0.01 vs. the model group.
Fig. 8 in Xylarinaps A-E, five pairs of naphthalenone derivatives with neuroprotective activities from Xylaria nigripes
Fig. 8. Effects of compounds 1–5 on MDA in OGD-induced PC12 cells. The values represent mean ± SD (n = 6). *P <0.05, **P <0.01 vs. the control group; #P <0.05, ##P <0.01 vs. the model group.
Fig. 10 in Xylarinaps A-E, five pairs of naphthalenone derivatives with neuroprotective activities from Xylaria nigripes
Fig. 10. Effects of compounds 1–5 on OGD-induced apoptosis of PC12 cells. (A) Apoptosis of PC12 cells detected by Hochest staining. (B) Apoptosis rate of PC12 cells for compounds 1–5. The values represent mean ± SD (n = 6). *P <0.05, **P <0.01 vs. the control group; #P <0.05, ##P <0.01 vs. the model group.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.