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5 results for “animal feces”
Fig. 2 in A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea
Fig. 2. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the isolated strains in this study and the notable species from phylum Firmicutes (a) order Lactobacillales (In particular Enterococcus, Lactobacillus and Vagococcus), phylum Actinobacteria (c) and phylum Proteobacteria (d) and. The trees were mainly reconstructed using the neighbor-joining algorithm (NJ), Maximum parsimony (MP) and maximum likelihood (ML) algorithms were applied for additional comparison. Filled diamonds indicate branches present in the phylogenetic trees generated using the three different methods. Numbers on the nodes (>70%) represent bootstrap values as percentages of 1000 replicates (NJ/MP/ML). Clostridium butyricum DSM 10702T (AQQF01000149), Bifidobacterium bifidum ATCC 29521T (KE993182) and Spirochaeta aurantia subsp. aurantia DSM 1902T (FR749896) were used as outgroups, respectively. Bar, 0.02 (a, c, d) and 0.01 (b) accumulated changes per nucleotide.
Fig. 1 in A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea
Fig. 1. Transmission electron micrographs of the isolated strains. Strain-1, AE4-1; strain-2, B3; strain-3, M3; strain-4, VM3408; strain-5, VT2418; strain-6, VM2501; strain-7, VT2414; strain-8, VT2504.
Intensified livestock farming increases antibiotic resistance genotypes and phenotypes in animal feces
<p class="MsoNormal"><span>Animal feces from livestock farming can be a major source of antibiotic resistance to the environment, but a clear gap exists on how the resistance reservoir in feces alters as farming activities intensify. Here, we sampled feces from eight Chinese farms, where yak, sheep, pig, and horse were reared under free-range to intensive conditions, and determined fecal resistance using both genotype and phenotype approaches. </span><span>A</span><span>nimals reared </span><span><span>intensively</span></span><span> exhibited increased </span><span><span>diversity</span></span><span> of antibiotic resistance genes (ARGs) and greater resistance phenotypes in feces, which were cross-correlated. Furthermore, a</span><span>t the metagenome contig level, ARGs</span><span> </span><span>were </span><span><span>co-located</span></span><span> with </span><span>mobile genetic elements </span><span>at a higher frequency (27.38%) </span><span>as farming intensified, </span><span>with</span><span> associated resistance phenotyp</span><span><span>e</span></span><span>s </span><span>being less coupled with bacterial phylogeny. </span><span>I</span><span>ntensified farming also expanded the multidrug resistance preferentially carried on pathogens in fecal microbi</span><span>omes</span><span><span>.</span></span><span> Overall, </span><span><span>farming intensification </span></span><span>can </span><span><span>increase </span></span><span>antibiotic resistance</span><span> <span>genotypes and phenotypes in </span></span><span>domestic animal </span><span><span>feces</span></span><span>, with implications for environmental health.</span></p> <p> </p>
Intensified livestock farming increases antibiotic resistance genotypes and phenotypes in animal feces
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Data from: Fear of feces? Trade-offs between disease risk and foraging drive animal activity around raccoon latrines
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