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395 results for “carbon to nitrogen”

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edi64/100

Carbon and nitrogen content and stable isotope compositions from biota samples from lagoon sites along the Alaska Beaufort Sea coast, 2018-ongoing

Stable isotopic composition can be used to differentiate between predominantly marine and terrestrial food sources in nearshore marine food webs. The Beaufort Lagoon Ecosystems LTER (BLE LTER) Core Program employs spatial and temporal sampling regimes to track shifts in diet, both seasonally (ice cover, ice break-up, and open water), and spatially among lagoons along the Alaskan Beaufort Sea coast. Ice coring, net tows, ponar grabs, and trawls are employed to collect organisms associated with the sea-ice interface, the water column, and the benthos respectively. Tissues are analyzed for stable isotopic composition as well as organic carbon and nitrogen content.

openCC0May 2025View details →
edi64/100

Georgia Salt Marsh: Soil Organic Carbon, Nitrogen, Bulk Density, Moisture, and Texture

As part of project predicting soil carbon at depth from that found at the surface using remote sensing, 28 soil cores were taken from six salt marshes along the Georgia coastline. Cores were taken as deep as possible (25 – 165 cm) and sectioned into 5 cm depths. Soils were analyzed for organic carbon (SOC), total nitrogen (N), bulk density (BD), and particle size (by horizon). Stable carbon isotopes were obtained in three marshes on Sapelo Island; a subset was also analyzed for radiocarbon.

openCC (other)Jan 2026View details →
edi60/100

Carbon and nitrogen content and stable isotope compositions from particulate organic matter samples from lagoon, river, and open ocean sites along the Alaska Beaufort Sea coast, 2018-ongoing

Multiple water types (river, lagoon, ocean) from the North Slope of Alaska and nearshore Beaufort Sea are sampled seasonally by the Beaufort Lagoon Ecosystems LTER (BLE LTER) Core Program to investigate biogeochemical linkages between terrestrial, lagoon, and open ocean ecosystems. Water samples are collected during full ice cover (April), ice break-up (mid-June to early July), and open water (late July and August) periods, and analyzed for particulate organic carbon (POC) and particulate organic nitrogen (PON) content and stable isotopic composition.

openCC0Nov 2025View details →
edi60/100

Carbon and nitrogen content and stable isotope composition from sediment organic matter from lagoon sites along the Alaska Beaufort Sea coast, 2018-ongoing

Multiple sediment samples from lagoons along the nearshore Beaufort Sea are sampled seasonally by the Beaufort Lagoon Ecosystems LTER (BLE LTER) Core Program to investigate biogeochemical linkages between terrestrial, lagoon, and open ocean ecosystems. Sediment samples are collected during full ice cover (April), ice break-up (mid-June to early July), and open water (late July and August) periods, and analyzed for carbon and nitrogen content and stable isotopic composition.

openCC0Oct 2025View details →
edi60/100

Dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) from river, lagoon, and open ocean sites along the Alaska Beaufort Sea coast, 2018-ongoing

Multiple water types (river, lagoon, ocean) from the North Slope of Alaska and nearshore Beaufort Sea are sampled seasonally by the Beaufort Lagoon Ecosystems LTER (BLE LTER) Core Program to investigate biogeochemical linkages between terrestrial, lagoon, and open ocean ecosystems. Water samples are collected during full ice cover (April), ice break-up (mid-June to early July), and open water (late July and August) periods and analyzed for dissolved organic carbon and total dissolved nitrogen content.

openCC0Nov 2025View details →
edi60/100

Total dissolved nitrogen (TDN), dissolved organic carbon (DOC), radiocarbon (14C-DOC), and stable carbon (13C-DOC) of surface waters from the Canning River watershed, 2019 and 2021

Sites along the Canning River mainstem and contributing streams near the Kavik River Camp, Alaska, were visited to track changes in stream and river total dissolved nitrogen (TDN) concentration, dissolved organic carbon (DOC) concentration, and the stable carbon (13C) and radiocarbon (14C) isotopic composition of DOC across transitions between the Brooks Range, Brooks foothills, and Arctic Coastal Plain. The dataset also includes water samples collected from lakes, springs, groundwater, and streams and rivers outside the Canning River watershed. Water samples were collected in late April and early August 2019 and in late July and early August 2021. Data include measurements of individual samples for TDN (milligrams nitrogen per liter), DOC (milligrams carbon per liter), carbon-13 of DOC (reported as delta-13C, per mil), carbon-14 of DOC (reported as fraction modern), and analytical error in the fraction modern values. Additional water chemistry data for these samples can be found in Koch et al. (2024). References: Koch, J. C., Connolly, C. T., Repasch, M., Best, H. R., Couvillion, C. S., Hunt, A. (2024). [Dataset] Hydrochemistry and age date tracers from springs, streams, and rivers in the Arctic National Wildlife Refuge, 2019-2022, U.S. Geological Survey data release, https://doi.org/10.5066/P95CXJIT.

openCC0Dec 2025View details →
edi60/100

Primary producer biomarker profiles of bulk carbon and nitrogen stable isotopes (SI), compound specific stable isotopes of carbon in essential amino acids (CSIA-EAA) and their fatty acid (FA) collected from the Beaufort Sea coastal lagoons,2021-2024

Within Stefansson Sound in Prudhoe Bay, AK various organic matter sources were collected to determine multiple biomarker baseline profiles (i.e., bulk carbon and nitrogen stable isotopes (SI), compound specific stable isotopes of carbon in essential amino acids (CSIA-EAA), fatty acids (FA)). Some organic matter sources were collected from Elson lagoon in Utqiaġvik, AK and Kaktovik and Jago lagoons in Kaktovik, AK to supplement low sample sizes in some organic matter source groups. Kelp, red algae, terrestrial plants, phytoplankton, and ice algae were collected in 2024 with some supplement samples collected in 2021 - 2023. Stable isotope values of δ13C and δ15N are reported as “del_13c” and “del_15n”, respectively. Individual fatty acids are reported as the percent relative to total fatty acids for 23 fatty acids: C11:0, C12:0, C14:0, C15:1, C15:0, C16:0, C16:1n7, C17:0, C17:1, C18:0, C18:1n9 trans, C18:2n6 cis, C18:1n7, C18:3n3, C20:0, C18:3n6, C20:4n6, C21:0, C22:0, C22:1n9, C23:0, C24:0, C22:6n3. Stable isotope values of δ13C are reported in the following essential amino acids: Valine (Val), Leucine (Leu), iLeu (isoleucine), Methionine (Met), Phenylalanine (Phe). Additionally, we used ice algal diatoms collected in the Arctic (landfast ice near Utqiaġvik, Alaska) and cultured in a laboratory setting at the University of Alaska Fairbanks to compare the CSIA-EAA fingerprints of field (composites) ice algal samples and isolate diatoms samples.

openCC0Jan 2026View details →
edi60/100

Comparing vertical accretion, organic carbon (C) sequestration, and nitrogen burial between a natural, never diked tidal salt marsh and a hydrologically restored tidal salt marsh on Sapelo Island, Georgia.

Restoration of tidal marshes throughout the 20th century have attempted to bring back important functions of natural tidal systems. In this study, vertical accretion, organic carbon (C) sequestration, and nitrogen burial were compared between a natural, never diked tidal salt marsh and a hydrologically restored tidal salt marsh on Sapelo Island, Georgia to examine the impacts of restoration years later. On Sapelo Island there are two marshes near the University of Georgia Marine Institute, one of which is a natural marsh, and one of which is a restored marsh. The restored marsh had been diked in 1948, and the dike was breached, allowing for the marsh to be restored, in 1956. Soil cores were collected from both marshes, and the sediments were analysed for Nitrogen and Carbon concentrations and bulk density. This analysis was used to determine accretion rates for the two marshes as well as changes in the restored marsh since the dike was breached. Nitrogen burial, carbon sequestration, and soil accretion in the restored marsh as compared to the natural marsh were the focus of this study.

openCC (other)Nov 2024View details →
edi60/100

Carbon and Nitrogen Across Two ULTRA-Ex Urban to Rural Gradients in Massachusetts 2010

As part of the Boston University-led, Urban Long-Term Research Area - Exploratory Award (ULTRA-Ex), we established 135 circular, 15 m radius biometric plots extending across two Boston urban-to-rural gradients (Boston MA to Petersham MA and Boston MA to Worcester MA). The plots were stratified based on neighborhood (1 km2 surrounding area) characteristics for population density, impervious surface area fraction, and land cover. Within each plot we measured aboveground live and dead biomass, species characteristics, ground cover characteristics, and soil properties.

openCC0Dec 2023View details →
edi60/100

Soil Carbon and Nitrogen at the Harvard Farm at Harvard Forest since 2015

These data represent baseline soil bulk density and total soil carbon and nitrogen concentrations for the three grazing treatments at Harvard Farm: hay (no grazing), rotational grazing, and intensive grazing. These samples were collected at the beginning of the study, so any differences across plots or treatments are due to inherent soil variability at the site rather than the treatments themselves. These data were collected to establish the starting conditions with which to compare potential treatment effects at later sampling dates.

openCC0Dec 2023View details →
edi56/100

Plant biomass, leaf area, carbon, nitrogen, and phosphorus in wet sedge tundra, 1994, Arctic LTER, Toolik Lake, Alaska.

Plant biomass, leaf area, carbon, nitrogen, and phosphorus were measured in three wet sedge tundra experimental sites. Treatments at each site included factorial NxP and at the Toolik sites greenhouse and shade house. Treatments started in 1985 (Sag site) and in 1988 (Toolik sites).

openCC (other)Feb 2023View details →
edi56/100

Soil Carbon Dioxide and Oxygen at the Soil Warming Plus Nitrogen Experiment at Harvard Forest since 2018

This dataset includes soil air CO2 and O2 concentrations measured from the organic/mineral horizon interface and 10, 30, and 50 cm depths of the mineral soil at SWaN using permanently installed stainless steel gas wells. Measurements were made 4-8 times throughout the year in 2018, 2019, and 2020.

openCC0Dec 2023View details →
edi56/100

Soil and foliar carbon and nitrogen content and stable isotope ratios from rainfall manipulation experiments at the Jornada Basin LTER, 2011-2020

As rainfall extremes are expected to increase in novel magnitude and frequency, especially in dryland regions, we asked how prolonged and directional shifts to water availability may affect ecosystem carbon and nitrogen dynamics. This data set includes foliar and soil carbon and nitrogen stable isotope and concentration data collected from multiple long-term rainfall manipulation experiments at the Jornada Basin LTER. Datasets also include rainfall data adjusted to rainfall manipulation intensities. Collection dates range from 5 to 14 years since the onset of experimental treatments. The primary plant species targeted for this study were the dominant grass, Bouteloua eriopoda, and the dominant shrub, Prosopis glandulosa.

openCC (other)Oct 2023View details →
edi56/100

Sediment Carbon and Nitrogen of Seagrass Restoration in Virginia Coastal Bays 2007-2021

This data set contains measurements of sediment carbon and nitrogen content in restored Z. marina meadows in Hog Island Bay and South Bay, VA. Sediments were sampled annually in June-July. GPS locations of sampling plots are available in the companion data set VCR11180.

openCustomMay 2022View details →
edi56/100

Carbon and Nitrogen in Seagrass Tissue from Virginia Coastal Bays, 2010-2021

This dataset contains measurements of carbon and nitrogen content of Z. marina tissue sampled in plots in the restored seagrass meadows in Hog Island Bay and South Bay, VA. Samples were collected annually during late June-early July. GPS locations of sampling plots are available in the companion data set VCR11180.

openCustomMay 2022View details →
zenodo52/100

Particulate organic carbon and particulate organic nitrogen concentrations and stable isotope composition of seawater sampled during the Antarctic Circumnavigation Expedition (ACE) during the Austral Summer of 2016/2017.

<p><strong>Dataset abstract</strong></p> <p>This dataset contains particulate organic carbon and particulate organic nitrogen concentrations and stable isotope composition (delta 13C and delta 15N) sampled during the Antarctic Circumnavigation Expedition (ACE) Leg 1-3. Water samples were collected from the underway seawater supply every 3 hours, filtered onto pre-combusted glass fibre filters, acidified to remove inorganic compounds and analysed for both elements on the same filter using an elemental analyser. These samples provide an estimate of the organic carbon and organic nitrogen concentration and carbon and nitrogen stable isotope composition of living and detrital particles &gt; 0.7 micrometres in size.</p> <p><strong>Dataset contents</strong></p> <ul> <li>README.txt, metatdata, text</li> <li>data_file_header.txt, metadata, text</li> <li>ace_uw_poc_pon_blanks_20200512CURRSGCMR.csv, data file, comma-separated values</li> <li>ace_uw_poc_pon_20200512CURRSGCMR.csv, data file, comma-separated values</li> </ul>

opencc-by-4.0May 2020View details →
zenodo52/100

nuts-STeauRY dataset: hydrochemical and catchment characteristics dataset for large sample studies of Carbon, Nitrogen, Phosphorus and Silicon in french watercourses

<p><strong>nuts-STeauRY dataset: hydrochemical and catchment characteristics dataset for large sample studies of Carbon, Nitrogen, Phosphorus and Silicon in French watercourses</strong></p> <p>Antoine Casquin, Marie Silvestre, Vincent Thieu</p> <p>10.5281/zenodo.10830852</p> <p>v0.1, 18<sup>th</sup> March 2024</p> <p><strong>Brief overview of data: </strong></p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Carbon and nutrients data for 5470 continental French catchments</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Modelled discharge for 5128 of catchments out of 5470</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Geopackages with catchment delineations and outlets</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; DEM conditioned to delimit additional catchments</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; Land-use and climatic data for 5470 continental French catchments</p> <p><strong>Citation of this work<br></strong></p> <p>A data paper is currently being submitted with details of methods and results. Once published, it will be the preferential source to cite. The data paper will be link to the new version of the dataset that will be updated on doi.org/10.5281/zenodo.10830852. If you use this dataset in your research or report, you must cite it.</p> <p><strong>Motivations</strong></p> <p>Data was collected and curated for the nuts-STeauRY project (<a href="http://nuts-steaury.cnrs.fr">http://nuts-steaury.cnrs.fr</a>), which deployed a national generic land to sea modelling chain.</p> <p>Data was primarily used (see related works):</p> <ol> <li>To calibrate concentrations of dissolved organic carbon and dissolve silica in headwaters</li> <li>To validate spatially and temporally the modelling chain (DOC, NO3-, NH4+, TP, SRP, DSi)</li> </ol> <p>Hydrochemical large sample datasets have numerous other uses: trends computations elucidate transfer mechanisms, machine learning, retrospective studies etc.</p> <p>The objective here is to provide a large sample curated dataset of carbon and nutrients concentrations along with modelled discharges, catchment characteristics and delimitations for the continental France. Such large sample dataset aims at easing the large sample studies over France and/or Europe. Although part of the data gathered here is obtainable via public sources, the catchments delineations, their characteristics and modelled hydrology were note not publicly available yet.&nbsp;Moreover, a unification of units and detection and removal of outliers was performed on carbon and nutrients data.</p> <p><strong>Data sources &amp; processing</strong></p> <p>Sampling points where snapped on the CCM database v2.1 (<a href="http://data.europa.eu/89h/fe1878e8-7541-4c66-8453-afdae7469221">http://data.europa.eu/89h/fe1878e8-7541-4c66-8453-afdae7469221</a>)(Vogt et al., 2007) and catchments were delineated using a 100m resolution Digital Elevation Model &nbsp;(DEM) conditioned by the hydrographic network and elementary catchments&rsquo; delineations of the CCM data v2.1. <strong>More than 6000 catchments were delineated and screened manually</strong> to check consistency: 5470 were retained<strong>.</strong></p> <p>Nutrient data was collected mainly through the Naiades portal (<a href="https://naiades.eaufrance.fr/">https://naiades.eaufrance.fr/</a>), a database collecting water quality data produced by different water related actors across France. Nutrient data was also collected directly with regional water agencies (<a href="https://www.eau-seine-normandie.fr/">https://www.eau-seine-normandie.fr/</a>, <a href="https://eau-grandsudouest.fr/">https://eau-grandsudouest.fr/</a>, <a href="https://www.eaurmc.fr/">https://www.eaurmc.fr/</a>, <a href="https://www.eau-artois-picardie.fr/">https://www.eau-artois-picardie.fr/</a>, <a href="https://www.eau-rhin-meuse.fr/">https://www.eau-rhin-meuse.fr/</a> and <a href="https://agence.eau-loire-bretagne.fr/home.html">https://agence.eau-loire-bretagne.fr/home.html</a>), and pre-processed using a database management system relying on PostgreSQL with PostGIS extension (Thieu &amp; Silvestre, 2015). A three-pass strategy was used to curate raw carbon and nutrients data: 1. Removal of &ldquo;obvious outliers&rdquo;, 2. Detection of baseline change and correction if possible (or removal of data) 3. Removal of outliers using a quantile based approach by element and temporal series.</p> <p>Hydrological time series are interpolation trough hydrograph transfer (de Lavenne et al., 2023) of 1664 time series of discharge completed with GR4J model (Pelletier &amp; Andr&eacute;assian, 2020; Pelletier 2021).</p> <p>Land cover data was extracted from Corine Land Cover dataset for years 2000, 2006, 2012, and 2018 (EEA, 2020). Raw CLC typology contains 44 classes. Results of percent cover per year per class were computed for each catchment. An aggregated typology of 8 classes is also proposed.</p> <p>Climatological data was extracted from daily reconstruction at 5 arcmin for temperatures and 1 arcmin for precipitation over Europe (Thiemig et al., 2022). Mean by catchment for min&amp;max daily temperature and precipitation were computed for each catchment for the 1990-2019 period.</p> <p><strong>Nuts-STeauRY dataset</strong></p> <p><strong>Carbon and nutrients time series</strong></p> <p>Time series of carbon and nutrients within the 1962-2019 period on 5470 stations: Dissolved Organic Carbon (DOC), Total Organic Carbon (TOC) Nitrates (NO3-), Nitrites (NO2-), Ammonia (NH4+), Soluble Reactive Phosphorus (SRP), Total Phosphorus (TP) and Dissolved Silica (DSi).</p> <p><code>|var | n_unique_station| n_total_meas| mean_duration_y| mean_frequency_y|</code></p> <p><code>|:---|----------------:|------------:|---------------:|----------------:|</code></p> <p><code>|DOC |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 4 992|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 658 147|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 14.3|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 9.0|</code></p> <p><code>|DSi |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 3 299|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 333 866|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 12.9|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;8.3|</code></p> <p><code>|NH4 |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 5 318|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 907 343|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 19.3|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 8.7|</code></p> <p><code>|NO2 |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 5 264|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 891 886|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 19.2|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 8.6|</code></p> <p><code>|NO3 |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 5 465|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 939 279|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 19.0|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 9.0|</code></p> <p><code>|SRP |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 5 361|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 910 107|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 19.1|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 8.7|</code></p> <p><code>|TOC |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 935|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 111 993|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 13.6|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 9.6|</code></p> <p><code>|TP&nbsp; |&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 5 199|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 802 841|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 17.1|&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 8.8|</code></p> <p>Note that some SRP and DSi measurements were declared as realized on raw water. A thorough analysis of time series show no evidence of difference on baselines. For more accuracy, it is advised to filter out those analyses using the &ldquo;fraction&rdquo; attribute of each measurement.</p> <p><strong>Discharge modelled daily time series</strong></p> <p>Modelled naturalized discharge through hydrograph transfer and interpolated measured discharges when available for the 1980-2019 period.</p> <p>A daily discharge was computed for 5128 catchments. For small catchments (&lt; 1000 km<sup>2</sup>, n = 4530), hydrograph transfer was used, while for big catchments, a direct interpolation of measured/completed discharges was performed. The direct interpolation was only possible for 598 catchments &gt; 1000 km<sup>2</sup>. The criteria retained for a direct interpolation is 0.8*area_discharge_station &lt; area_quality &lt; 1.2*area_discharge_station when discharge and quality stations were nested.</p> <p>Hydrological time series uncertainties varies a lot depending on: quality of data source, distance from pseudo-gauged outlets, land cover of the catchments, natural spatial and temporal variability of discharge, size of the catchment (de Lavenne et al., 2016). We advise a cautious use of those modelled discharges as uncertainties could not be computed.</p> <p><strong>Catchments, outlets and conditioned DEM</strong></p> <p>5470 catchments and outlets are delivered as geopackages (EPSG: 3035).</p> <p>The DEM, conditioned by CCM 2.1 is also delivered as a GeoTIFF (EPSG: 3035) as way to delimit new catchment for the area that are consistent with the dataset.</p> <p><strong>Catchments characteristics and climate</strong></p> <p>Refer to Data sources &amp; processing and File descriptions.</p> <p><strong>&nbsp;</strong></p> <p><strong>File and attributes descriptions: </strong></p> <p>The key &ldquo;sta_code&rdquo; is present across all files. For time varying records, &ldquo;date&rdquo; can be a secondary key. &nbsp;</p> <p><strong>Description of CNPSi.csv data attributes</strong></p> <p>Each line is a couple measurement/parameter/station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_code: Code of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_name: Name of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; var: Abbreviation of parameter name</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; fraction: "water_filtrated" or "water_raw"</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; date:&nbsp; date of sampling</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; hour: hour of sampling</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; value: analytical result (concentration)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; provider: provider of the data</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; producer: producer of the data</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; from_db: "Naiades2022" (https://naiades.eaufrance.fr/france-entiere#/ dump from 2022) or "DoNuts" (Thieu, V., Silvestre, M., 2015. DoNuts: un syst&egrave;me d&rsquo;information sur les observations environnementales. Pr&eacute;sentation S&eacute;minaire UMR M&eacute;tis)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; n_meas: number of observations for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; unit: unit of concentration</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; element: "C" "N" "P" or "Si"</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; year: year of observation</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; month: month of observation</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; day: day of observation</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; julian_day: julian day observation (1-366)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; decade: decade of observation (one of "1961-1970", "1971-1980", "1981-1990", "1991-2000", "2001-2010", "2011-2020")</p> <p>&nbsp;</p> <p>&nbsp;</p> <p><strong>Description of CNPSi_stats.csv data attributes</strong></p> <p>Each line is a couple parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_code: Code of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_name: Name of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; var: Abbreviation of parameter name</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; n_meas: number of observations for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; start_year: year of first observation for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; end_year: year of last observation for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; duration_y_tot: total duration of observation in years for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; duration_y_tot: duration of observation in years for a given parameter / station for years with at least 1 meas</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; mean_nmeas_per_y_tot: mean number of observations per year considering total duration</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; mean_nmeas_per_y_meas: mean number of observations per year considering years with measurements</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; is_fully_continuous: TRUE if at least one measurement per year for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; start_cont_seq: year in which starts the longest continuous sequence for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; end_cont_seq: year in which ends the longest continuous sequence for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; duration_y_cont_seq: duration in years for the longest continuous sequence for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; nmeas_cont_seq:&nbsp; number of measurements for the longest continuous sequence for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; mean_nmeas_per_y_cont_seq: mean number of observations per year for the longest continuous sequence for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; mean: mean value (concentration) for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; median: median value (concentration) for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sd: standard deviation (concentration) for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; cv: coeficient of variation (concentration) for a given parameter / station</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; c05,c25,c50,c75,c95: centiles 5, 25, 50, 75 &amp; 95 for a given parameter / station</p> <p><strong>Description of catchments.gpkg and outlets.gpkg data attributes</strong></p> <p>Each line is a catchment or an outlet (sampling point)</p> <p>File is a .gpkg (EPSG = 3035)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_code: Code of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_name: Name of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; watercourse: Name of the water course (from spatial join on IGN BD Topo)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; mun_name: Name of the municipality of the outlet (from spatial join on IGN BD Admin Express)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; ccm_wso_id: Seaoutlet id from CCM v2.1 database</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; ccm_wso1_id: Elementary catchment id from CCM v2.1 database</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; ccm_strahler: Strahler order of the catchment from CCM v2.1 database</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; area_km2: Computed area in km2 of the catchment</p> <p><strong>Description of daily discharges data attributes</strong></p> <p>Each line corresponds to a daily modelled discharge at a quality station from 1980 to 2019</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_code: Code of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; date: Date in format yyyy-mm-dd</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; flow_mm: Discharge expressed in mm.d-1</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; flow_m3s: Discharge expressed in m3.s-1</p> <p><strong>Description of climate data attributes</strong></p> <p>Each line in the pr_tmin_tmax_1990-2019_lt_mean.csv corresponds to a mean value within a catchment for the 1990-2019 period.</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; sta_code: Code of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; period: 1990-2019</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; source: EMO-1 (pr) &amp; EMO-5 (tmin, tmax)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; pr: mean yearly precipitation (mm)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; tmin: mean daily minimal temperature (&deg;C)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; tmin: mean daily maximal temperature (&deg;C)</p> <p><strong>Description of land cover data attributes</strong></p> <p>Each line in the clc_8class.csv and clc_44class.csv corresponds to Corine Land Cover (CLC) class for a year (1990, 2000, 2006, 2012, or 2018) and a catchment. Raw CLC typology describes 44 classes that were aggregated to 8 classes (see clc_44class_to_8class.csv).</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; clc_44class.csv</p> <p>o&nbsp;&nbsp; sta_code: Code of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>o&nbsp;&nbsp; year: Year as stated in CLC product</p> <p>o&nbsp;&nbsp; clc_name: Description of land cover class in CLC product</p> <p>o&nbsp;&nbsp; clc_code: Code for land cover class in CLC product</p> <p>o&nbsp;&nbsp; percent_cover: Percent cover by CLC class in the catchment (0-100)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; clc_8class.csv</p> <p>o&nbsp;&nbsp; sta_code: Code of the station in the Sandre referentiel (public french "dataverse" for water data)</p> <p>o&nbsp;&nbsp; year: Year as stated in CLC product</p> <p>o&nbsp;&nbsp; label_clc_8class: Description of land cover class in CLC product aggregated in 8 classes (see clc_44class_to_8class.csv)</p> <p>o&nbsp;&nbsp; code_clc_8class: Code for land cover class in CLC product aggregated in 8 classes (see clc_44class_to_8class.csv)</p> <p>o&nbsp;&nbsp; percent_cover: Percent cover by aggregated CLC class in the catchment (0-100)</p> <p>&middot;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; clc_44class_to_8class.csv</p> <p>o&nbsp;&nbsp; code_clc: Code for land cover class in CLC product (44 classes)</p> <p>o&nbsp;&nbsp; code_clc_8class: Code for land cover class in aggregated CLC product (8classes)</p> <p>o&nbsp;&nbsp; label_clc_8class: Description of land cover class in CLC product aggregated in 8 classes (see clc_44class_to_8class.csv)</p> <p>&nbsp;</p> <p>&nbsp;</p> <p><strong>Acknowledgement</strong></p> <p>This publication has been prepared using European Union's Copernicus Land Monitoring Service information; <a href="https://doi.org/10.2909/960998c1-1870-4e82-8051-6485205ebbac">https://doi.org/10.2909/960998c1-1870-4e82-8051-6485205ebbac</a></p> <p>The authors thank Vasken Andr&eacute;assian for communicating the discharge data and discharge station data and Alban de Lavenne for its help in using the transfr package, both for INRAE UR HYCAR.</p> <p>&nbsp;</p> <p><strong>References</strong></p> <p>de Lavenne, A., Sk&oslash;ien, J. O., Cudennec, C., Curie, F., &amp; Moatar, F. (2016). Transferring measured discharge time series: Large-scale comparison of Top-kriging to geomorphology-based inverse modeling: transferring measured discharge time series. Water Resources Research, 52(7), 5555&ndash;5576. https://doi.org/10.1002/2016WR018716</p> <p>de Lavenne, A., Loree, T., Squividant, H., &amp; Cudennec, C. (2023). The transfR toolbox for transferring observed streamflow series to ungauged basins based on their hydrogeomorphology. Environmental Modelling &amp; Software, 159, 105562. <a href="https://doi.org/10.1016/j.envsoft.2022.105562">https://doi.org/10.1016/j.envsoft.2022.105562</a></p> <p>EEA. (2020). Corine Land Cover &eacute;dition 2018. CLC 2018. <a href="https://www.eea.europa.eu/data-and-maps/data/copernicus-land-monitoring-service-corine">https://www.eea.europa.eu/data-and-maps/data/copernicus-land-monitoring-service-corine</a></p> <p>Pelletier, A., &amp; Andr&eacute;assian, V. (2020). Hydrograph separation: An impartial parametrisation for an imperfect method. Hydrology and Earth System Sciences, 24(3), 1171&ndash;1187. <a href="https://doi.org/10.5194/hess-24-1171-2020">https://doi.org/10.5194/hess-24-1171-2020</a></p> <p>Pelletier, A. (2021). Compl&eacute;tion d'hydrogrammes avec le mod&egrave;le GR4J - Note m&eacute;thodologique. INRAE, UR HYCAR.</p> <p>Thiemig, V., Gomes, G. N., Sk&oslash;ien, J. O., Ziese, M., Rauthe-Sch&ouml;ch, A., Rustemeier, E., Rehfeldt, K., Walawender, J. P., Kolbe, C., Pichon, D., Schweim, C., and Salamon, P.: EMO-5: a high-resolution multi-variable gridded meteorological dataset for Europe, Earth Syst. Sci. Data, 14, 3249&ndash;3272, https://doi.org/10.5194/essd-14-3249-2022, 2022</p> <p>Thieu, V., Silvestre, M., 2015. DoNuts : un syst&egrave;me d'information sur les observations environnementales. Pr&eacute;sentation S&eacute;minaire UMR M&eacute;tis</p> <p>Vogt, J., A. de Jager, E. Rimaviciute, W. Mehl, S. Foisneau, K. B&oacute;dis, J. Dusart, M.L. Paracchini, P. Haastrup, &amp; C. Bamps. (2007). A pan-European river and catchment database. (European Commission. Joint Research Centre. Institute for Environment and Sustainability.). Publications Office. https://data.europa.eu/doi/10.2788/35907</p>

opencc-by-4.0Mar 2024View details →
zenodo52/100

PARAGON 1 - KM2112 - Particulate Carbon and Nitrogen Timecourse Incubations

<p>This dataset contains measurements of particulate carbon and nitrogen concentrations collected during the PARAGON 1 expedition (KM2112) in the North Pacific Subtropical Gyre. Measurements come from time-course incubation experiments initiated with whole seawater collected at 150 m using trace metal clean techniques and modified with various additions of organic carbon, iron, and/or nitrogen. Samples for measurements of particulate carbon and nitrogen concentrations were collected at multiple time points for each experimental biological replicate by filtering 4 L of seawater from polycarbonate incubation bottles onto pre-combusted 25 mm glass fiber filters (GF/F, Whatman) under positive pressure. Filters were then transferred to polystyrene Petri dishes lined with pre-combusted aluminum foil and stored at -20&deg;C until analysis onshore. Filters were then analyzed by high temperature combustion using an Exeter CE-440 Elemental Analyzer according to Grabowski et al. (2019). Particulate carbon concentrations are measurements of total particulate carbon, including both organic and inorganic carbon. Timestamp is in UTC.</p>

opencc-by-4.0Apr 2024View details →
zenodo52/100

PARAGON 1 - KM2112 - Particulate Carbon and Nitrogen In Situ Measurements

<p>This dataset contains measurements of particulate carbon and nitrogen concentrations collected during the PARAGON 1 expedition (KM2112) in the North Pacific Subtropical Gyre. Measurements come from daily collections of whole seawater at 150 m using trace metal clean techniques. Samples for measurements of particulate carbon and nitrogen concentrations were collected by filtering 4 L of whole seawater onto pre-combusted 25 mm glass fiber filters (GF/F, Whatman) under positive pressure. Filters were then transferred to polystyrene Petri dishes lined with pre-combusted aluminum foil and stored at -20&deg;C until analysis onshore. Particulate carbon and nitrogen concentrations were then determined by high temperature combustion using an Exeter CE-440 Elemental Analyzer according to Grabowski et al. (2019). Particulate carbon concentrations are measurements of total particulate carbon, including both organic and inorganic carbon. Timestamp is in UTC.</p>

opencc-by-4.0Apr 2024View details →
zenodo52/100

PARAGON 2 - KM2209 - Particulate Carbon and Nitrogen Timecourse Incubations

<p>This dataset contains measurements of particulate carbon and nitrogen concentrations collected during the PARAGON 2 expedition (KM2209) in the North Pacific Subtropical Gyre. Measurements come from time-course incubation experiments initiated with whole seawater collected at 150 m using trace metal clean techniques and modified with various additions of organic carbon, iron, and/or nitrogen. Samples for measurements of particulate carbon and nitrogen concentrations were collected at multiple time points for each experimental biological replicate by filtering 4 L of seawater from polycarbonate incubation bottles onto pre-combusted 25 mm glass fiber filters (GF/F, Whatman) under positive pressure. Filters were then transferred to polystyrene Petri dishes lined with pre-combusted aluminum foil and stored at -20&deg;C until analysis onshore. Filters were then analyzed by high temperature combustion using an Exeter CE-440 Elemental Analyzer according to Grabowski et al. (2019). Particulate carbon concentrations are measurements of total particulate carbon, including both organic and inorganic carbon. Timestamp is in UTC.</p>

opencc-by-4.0May 2024View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record