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Dataset results
8 results for “concerted evolution”
Phlorest phylogeny derived from Hruschka et al. 2015 'Detecting regular sound changes in linguistics as events of concerted evolution'
<p>Cite the source of the dataset as:</p> <blockquote> <p>Hruschka, D. J., Branford, S., Smith, E. D., Wilkins, J., Meade, A., Pagel, M., & Bhattacharya, T. (2015). Detecting regular sound changes in linguistics as events of concerted evolution. Current Biology, 25(1), 1-9.</p> </blockquote>
CLDF dataset derived from Hruschka et al.'s "Detecting regular sound changes in linguistics as events of concerted evolution" from 2015
<p>Cite the source of the dataset as:</p> <blockquote> <p>Hruschka, D. J., Branford, S., Smith, E. D., Wilkins, J., Meade, A., Pagel, M., & Bhattacharya, T. (2015). Detecting regular sound changes in linguistics as events of concerted evolution. Current Biology, 25(1), 1-9.</p> </blockquote>
Data from: Routine mitochondrial recombination drives rapid concerted evolution of duplicated control regions in a wild fish
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Data from: Concerted evolution reveals co-adapted amino acid substitutions in Na+K+ ATPase of frogs that prey on toxic toads
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Data from: Concerted versus independent evolution and the search for multiple refugia: comparative phylogeography of four forest beetles
Phylogeographic structure and its underlying causes are not necessarily shared among community members, with important implications for using individual organisms as indicators for ecosystem evolution, such as the identification of forest refugia. We used mitochondrial DNA (COI), Bayesian coalescent ancestral state reconstruction (implemented in BEAST) and ecological niche models (ENMs) to construct geo-spatial histories for four co-distributed New Zealand forest beetles (Leiodidae, Nitidulidae, Staphylinidae, Zopheridae) to examine the extent to which they have tracked environmental changes together through time. Hindcast ENMs identified potential forest refugia during the Last Glacial Maximum, while ancestral state reconstruction identified key geographic connections for each species, facilitating direct comparison of dispersal patterns supported by the data and the time frame in which they occurred. Well-supported geographic state transitions for each species were mostly between neighboring regions, favoring a historical scenario of stepping stone colonization of newly-suitable habitat rather than long distance dispersal. No geographic state transitions were shared by all four species, but three shared multiple projected South Island refugia and recent dispersal from the southernmost refugium. In contrast, strongly supported dispersal patterns in the refugia-rich northern South Island suggest more individualistic responses to environmental change in these ecologically similar forest species.
Fig. 3 in Concerted evolution, a slow process for ant satellite DNA: study of the satellite DNA in the Aphaenogaster genus (Hymenoptera, Formicidae)
Fig. 3 Bayesian tree obtained using the concatenated nucleotide sequences from three nuclear gene fragments: wingless (wnt-1), abdominal-A (abdA), and long-wavelength rhodopsin (lwRh) and two mitochondrial gene fragments: 16S and COI-COII. The first number at nodes indicate the posterior probabilities in the Bayesian inference analysis. The second numbers at nodes indicate the bootstrap values obtained in the maximum-likelihood analysis (GTR + G + I substitution model) (only when higher than 50%).The ant Monomorium pharaonis was used as an out-group. A simplified version of the phylogenetic tree obtained with the satDNA sequences (Fig. 2) is shown on the right. The triangles represent the clusters that group most of the sequences of one or two species. Only the bootstrap values of some nodes are shown
Data from: Concerted versus independent evolution and the search for multiple refugia: comparative phylogeography of four forest beetles
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Pervasive concerted evolution in gene expression shapes cell type transcriptomes
GEO Series GSE89040. Gallus gallus; Dromaius novaehollandiae. 14 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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