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Dataset results
7 results for “contact line”
Water conformation at three-phases contact lines
<p>This dataset contains detailed trajectories obtained from molecular dynamics simulations performed using GROMACS. The simulated system consists in a quasi-2-dimensional SPC/E water meniscus confined between solid substrates composed by silica quadrupoles. Details on the molecular model and the simulation technique can be found in the references article. The data collected in this dataset are utilized in a ongoing project aimed to demystify the motion of three-phases contact lines over hydrophilic surfaces.</p>
Text-fig. 7. Exbeckettia mastixioides (E.REID et M.CHANDLER) comb. nov. Details of anatomy in transverse section on cut surfaces from bilocular fruit shown in Text-fig. 6i, V. 23013(3). a: Details of seed (S), locule (L), distinct endocarp planes of separation (arrows). b: Detail of endocarp adjacent to the locule, and surrounding mesocarp. Blue lines indicate thickness of sclerenchyma lining the locule. Note layer of horizontally oriented periclinal fibres a few cells thick, lining the locule (arrow). c: Enlargement showing parenchyma cells of the mesocarp decreasing in diameter toward the periphery. d: Enlargement showing fibres and sclereids of the endocarp. e: Sharp contact between endocarp and mesocarp. f, g: Detailed anatomy of endocarp including locule lining, and contact with mesocarp. Scale bars 2 mm in (a), (b), 1 mm in (c–g). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision
Text-fig. 7. Exbeckettia mastixioides (E.REID et M.CHANDLER) comb. nov. Details of anatomy in transverse section on cut surfaces from bilocular fruit shown in Text-fig. 6i, V. 23013(3). a: Details of seed (S), locule (L), distinct endocarp planes of separation (arrows). b: Detail of endocarp adjacent to the locule, and surrounding mesocarp. Blue lines indicate thickness of sclerenchyma lining the locule. Note layer of horizontally oriented periclinal fibres a few cells thick, lining the locule (arrow). c: Enlargement showing parenchyma cells of the mesocarp decreasing in diameter toward the periphery. d: Enlargement showing fibres and sclereids of the endocarp. e: Sharp contact between endocarp and mesocarp. f, g: Detailed anatomy of endocarp including locule lining, and contact with mesocarp. Scale bars 2 mm in (a), (b), 1 mm in (c–g).
Datasets for "Resolving the microscopic hydrodynamics at the moving contact line"
<p>Datasets for the article:</p> <p>"Resolving the microscopic hydrodynamics at the moving contact line" <br> Amal K. Giri, Paolo Malgaretti, Dirk Peschka, and Marcello Sega<br> Phys. Rev. Fluids <strong>7</strong>, L102001<br> DOI: 10.1103/PhysRevFluids.7.L102001</p> <p>Includes:</p> <ol> <li>GROMACS input files</li> <li>Modifications to the GROMACS source code thermostat as described in the article</li> <li>Instructions on how to invoke the patched version of GROMACS with decoupled directions</li> <li>Matlab datafiles with FE solutions and scripts to analyse and compare them to MD velocity field (also included)</li> </ol> <p> </p> <p>See also: <br> https://github.com/Marcello-Sega/pytim<br> https://github.com/dpeschka/stokes-free-boundary</p>
Intrachromosomal Hi-C contact lists and matrices of lymphoma cell lines
<p>Hi-C datasets generated in Donaldson, Sungalee, Zufferey, Tavernari et al. are provided as intrachromosomal contact lists and matrices, divided by cell line/condition and chromosome.<br> <br> The following lymphoma cell lines/conditions are available:<br> - Karpas-422 (KARPAS_DMSO and KARPAS_GSK treatment)<br> - WSU-DLCL2 (WSU_DMSO and WSU_GSK treatment)<br> - OCI-Ly19 (LY19WT_DMSO)<br> - OCI-Ly19 expressing the mutated protein EZH2Y646F (LY19Y646F_DMSO)<br> <br> Contact lists are provided as compressed plain-text files in which each row represents a Hi-C contact. Column fields are described below:<br> 1) strand of read 1 (0=forward, 16=reverse)<br> 2) chromosome of read 1<br> 3) position on the chromosome where read 1 aligned<br> 4) strand of read 2 (0=forward, 16=reverse)<br> 5) chromosome of read 2<br> 6) position on the chromosome where read 2 aligned<br> 7) mapping quality of read 1<br> 8) name of the read pair as seen in the FASTQ files<br> 9) mapping quality of read 2<br> <br> Intrachromosomal Hi-C matrices are provided in .hic format for visualization with JuiceBox software. </p>
Observational Study of Early Contact With Palliative Care Unit for Patients Receiving First Line Palliative Chemotherapy With Cancer in Upper Gastrointestinal Canal, or Second Line Palliative Chemothe
ClinicalTrials.gov study NCT02246725. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Hi-C analysis of genomic contacts revealed karyotype abnormalities in chicken HD3 cell line
GEO Series GSE217327. Gallus gallus. 2 samples. Type: Other.
Initiation of First-line Antiretroviral Treatment With TENOFOVIR ALAFENAMIDE - EMTRICITABINE - BICTEGRAVIR at the First Clinical Contact in France: Trial IMEA 055 - FAST
ClinicalTrials.gov study NCT03858478. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.