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47 results for “cytochrome oxidase gene I”
Fig. 7. Maximum-likelihood tree for the mitochondrial DNA gene Cytochrome Oxidase C subunit 1 in A new species of the catfish Neoplecostomus (Loricariidae: Neoplecostominae) from a coastal drainage in southeastern Brazil
Fig. 7. Maximum-likelihood tree for the mitochondrial DNA gene Cytochrome Oxidase C subunit 1 for specimens of Neoplecostomus microps from rio Paraíba do Sul, rio Guapi- Açu and rio Macaé, and of Neoplecostomus paraty, using TN93+G model (n=21). Neoplecostomus paranensis and Neoplecostomus ribeirensis were used as outgroups.
Fig. 3. Cytochrome c oxidase subunit I in Analysis of COI gene, prevalence, and intensity of the bat fly Cyclopodia greeffi on roosting straw-coloured fruit bat Eidolon helvum in Southwest Nigeria
Fig. 3. Cytochrome c oxidase subunit I (COI) gene sequence phylogeny showing the relationship between Cyclopodia greeffi and other species of the same and different genera. Values obtained from Bayesian posterior are presented as supports at the nodes. BI – Bayesian posterior probability value.
Fig. 1. The Neighbor Joining tree for 37 in Taxonomic Diversity Of The Genus Tor (Cyprinidae) From Aceh Waters In Indonesia Based On Cytochrome Oxidase Sub-Unit I (Coi) Gene
Fig. 1. The Neighbor Joining tree for 37 sequences of Tor from seven locations in Aceh Province estimated using 1000 bootstrap replications.
Fig. 5 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 5. Distribution and frequency of Prosthenorchis elegans haplotypes (A–F) and haplogroups (I–II) by locality and individual. URRAS: Unidad de Rescate y Rehabilitacíon de Animales Silvestres, Universidad Nacional de Colombia; AMVA: Area Metropolitana del Valle de Aburŕa; WCS: Wildlife Conservation Society-Colombia.
Fig. 4 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 4. Phylogenetic tree obtained using Bayesian Inference (BI) and Maximum Likelihood (ML); node supports are provided for BI\ML. Outgroup taxa: Oncicola sp, AF417000; O. luehe = Oncicola luehe, JN710452; M. ingens = Macracanthorhynchus ingens, AF416997; M. hirudinaceus = Macracanthorhynchus hirudinaceus, FR856886; O. tortuous = Oligacanthorhynchus tortuous, AF416999.
Fig. 3 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 3. Haplotype network of Prosthenorchis elegans. Network shows relationships among P.elegans haplotypes (A–F) recovered from Saguinus leucopus and Cebus albifrons based on 633 bp of COI. All branches are of unit length (one mutational step). Labeled open circles represent observed haplotypes; areas of circles are proportional to the number observed for each haplotype. Filled circles indicate inferred haplotypes not found among sampled individuals. Double lines indicate variable sites (49, 274 and 293) resulting in changes in amino acid. Haplogroups are identified.
Fig. 2 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 2. External morphology of Prosthenorchis elegans via scanning electron microscopy (SEM). A. View of entire body of parasite. B. Proboscis armed with hooks.
Figure 1 in A comprehensive phylogenetic analysis of Grapsoidea crabs (Decapoda: Brachyura) based on mitochondrial cytochrome oxidase subunit 1 (CO1) genes
Figure 1. PCR images of eight Grapsoidea species. "1" is S. sinensis; "2" is C. sinensis; "3" is P. bidens; "4" is H. latimera; "5" is H. tientsinensis; "6" is H. wuana; "7" is H. sanguineus; "8" is V. litterata.
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732). in A study of genetic diversity among different population of Orthochirus sp. based on cytochrome C oxidase subunit I and 16srRNA sequencing
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732).
Figure 1 in Evolutionary analyses of phylum Chaetognatha based on mitochondrial cytochrome oxidase I gene
Figure 1. The Bayesian tree based on the analysis of COI gene sequences. The confidence values are presented on the nodes.
Figure 2 in Evolutionary analyses of phylum Chaetognatha based on mitochondrial cytochrome oxidase I gene
Figure 2. The maximum likelihood tree based on the analysis of COI gene sequences. The confidence values are presented on the nodes.
Fig. 4. Maximum Parsimony consensus tree for the mitochondrial gene Cytochrome Oxidase I in New species of Moenkhausia Eigenmann, 1903 (Characiformes: Characidae) with comments on the Moenkhausia oligolepis species complex
Fig. 4. Maximum Parsimony consensus tree for the mitochondrial gene Cytochrome Oxidase I. Numbers represent values of 1000 bootstrap replicates.
Fig. 2 in Do cytochrome c oxidase 1 gene sequences differentiate species of spirostreptid millipedes (Diplopoda: Spirostreptida: Spirostreptidae)?
Fig. 2. Saturation plot of a dataset comprising 520 nucleotides of the mitochondrial cytochrome c oxidase 1 gene created in DAMBE (Xia & Xie 2001). The GTR model was used to calculate genetic distance in substitutions per site; s – transition, v – transversion.
Fig. 1 in Do cytochrome c oxidase 1 gene sequences differentiate species of spirostreptid millipedes (Diplopoda: Spirostreptida: Spirostreptidae)?
Fig. 1. Summary of intra-specific, inter-specific and inter-generic genetic distances within representatives of the family Spirostreptidae and between members of the orders Spirostreptida, Julida and Callipodida. The dotted line represents the mean value of a category.
Fig. 3 in Do cytochrome c oxidase 1 gene sequences differentiate species of spirostreptid millipedes (Diplopoda: Spirostreptida: Spirostreptidae)?
Fig. 3. Bayesian inference tree based on an analysis of 520 nucleotides of the mitochondrial cytochrome c oxidase 1 gene showing relationships between Spirostreptida species and outgroups (Julida and Callipodida species). Numbers adjacent to taxon names are GenBank accession numbers, and indicate sequences that were downloaded from the NCBI Genbank. This tree was congruent in structure with maximum parsimony and neighbour-joining analyses of the same dataset. Nodal support values are indicated as (posterior probability / maximum parsimony bootstrap / neighbour-joining bootstrap).
Fig. 1 in Mitochondrial DNA diversity in the acanthocephalan Prosthenorchis elegans in Colombia based on cytochrome c oxidase I (COI) gene sequence
Fig. 1. Photo showing the characteristic external morphology of Prosthenorchis elegans.
Figure S1 in A comprehensive phylogenetic analysis of Grapsoidea crabs (Decapoda: Brachyura) based on mitochondrial cytochrome oxidase subunit 1 (CO1) genes
Figure S1. Nucleotide sequences alignment information of the CO1 genes of eight Grapsoidea species.
standard with together) corner left bottom (analysis genetic the in included species among bold gene in shown oxidase-I are SE cytochrome and species the within at) % (divergence divergence sequence average The . pairwise) corner showing right upper (Matrix) %;. SE 4 ABLE (T error in Description of a new species of the Rhinolophus trifoliatus-group (Chiroptera: Rhinolophidae) from Southeast Asia
standard with together) corner left bottom (analysis genetic the in included species among bold gene in shown oxidase-I are SE cytochrome and species the within at) % (divergence divergence sequence average The . pairwise) corner showing right upper (Matrix) %;. SE 4 ABLE (T error
Fig. 2 in Two Color Variants ofSternidius alpha(Say) (Coleoptera: Cerambycidae) Show Dissimilar Cytochrome Oxidase I Genes
Fig. 2. Maximum Likelihood phylogeny inferred from barcode data of 14 Sternidius alpha specimens. Figures above the nodes indicate bootstrap support values in percentages.
Fig. 1 in Two Color Variants ofSternidius alpha(Say) (Coleoptera: Cerambycidae) Show Dissimilar Cytochrome Oxidase I Genes
Fig. 1. Location map of the Sternidius alpha specimens used in this study. The smaller circles denote a single specimen caught at those sites, while the bigger circles denote three specimens caught at those sites.
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