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21 results for “ecological specialist”
Genomics of extreme ecological specialists: multiple convergent evolution but no genetic divergence between ecotypes of Maculinea alcon butterflies
<p>Biotic interactions are often acknowledged as catalysers of genetic divergence and eventual explanation of processes driving species richness. We address the question, whether extreme ecological specialization is always associated with lineage sorting, by analysing polymorphisms in morphologically similar ecotypes of the myrmecophilous butterfly <em>Maculinea alcon</em>. The ecotypes occur in either hygric or xeric habitats, use different larval host plants and ant species, but no significant distinctive molecular traits have been revealed so far. We apply genome-wide RAD-sequencing to specimens originating from both habitats across Europe in order to get a view of the potential evolutionary processes at work. Our results confirm that genetic variation is mainly structured geographically but not ecologically — specimens from close localities are more related to each other than populations of each ecotype from distant localities. However, we found two loci for which the association with xeric versus hygric habitats is supported by segregating alleles, suggesting convergent evolution of habitat preference. Thus, ecological divergence between the forms probably does not represent an early stage of speciation, but may result from independent recurring adaptations involving few genes. We discuss the implications of these results for conservation and suggest preserving biotic interactions and main genetic clusters.</p>
Data from: The spotted parrotfish genome provides evolutionary insight into the ecological adaptation of a keystone dietary specialist
<p>With over 600 valid species, the wrasses (family Labridae) are among the largest and most successful of the marine teleosts. They feature prominently on coral reefs where they are known not only for their impressive diversity in colouration and form, but also in their functional specialization and ability to occupy a wide variety of trophic guilds. Among the wrasses, the parrotfishes (tribe Scarini) display some one of the most dramatic examples of trophic specialization. Using abrasion-resistant biomineralized teeth, parrotfishes are able to mechanically extract protein-rich micro-photoautotrophs growing in and amongst reef carbonate material, a dietary niche that is inaccessible to most other teleost fishes. This ability to exploit an otherwise untapped trophic resource is thought to have played a role in the diversification and evolutionary success of the parrotfishes. In order to better understand the key evolutionary innovations leading to the success of these dietary specialists, we sequenced and analysed the genome of a representative species, the spotted parrotfish (<em>Cetoscarus ocellatus</em>). We find significant expansion, selection, and duplication within several detoxification gene families and a novel poly-glutamine expansion in the enamel protein ameloblastin, and we consider their evolutionary implications. Our genome provides a useful resource for comparative genomic studies investigating the evolutionary history of this highly specialized teleostean radiation.</p>
FIGURE 6 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 6. Suggested head positions of Spinosaurus relative to water. A) when dipping the snout in the water to forage while leaving the naris above the waterline as per the wading model. Head angle of 45 degrees based on Schade et al. (2020) for Irritator. B) while lying submerged, keep the naris and orbit clear of the water while minimising the amount of head that is exposed as per Arden et al. (2019), C) fully submerged as if coming up for air and trying to expose only the nares to breathe. Scale bar equals 1 m.
FIGURE 9 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 9. Line drawings of mid caudal vertebrae and chevrons of assorted reptiles (all in left lateral view) compared to A) Spinosaurus (Ibrahim et al., 2020a). Taxa with known or inferred signaling structures linked to their elongate neural spines (top row), B) Bagaceratops (Tereschenko and Singer, 2013), the sail-finned lizards C) Hydrosaurus* and D) Basiliscus* (courtesy of Jeroen Costeseque), E) the drepanosaur Drepanosaurus (redrawn from Sues, 2019), F) the chameleon Trioceros (courtesy of Steven Huskey), and those which show adaptations for aquatic locomotion (bottom row), G) a juvenile specimen of the crocodylian Tomistoma* (courtesy of Mathew Wedel), H) the phytosaur Mystriosuchus (Renesto and Lombardo, 1999) I) the mosasaur Mosasaurus (modified from Lindgren et al., 2011), J) the sea snake Pelamis (modified from Lindgren et al., 2011), and K) diapsid Hovasaurus* (redrawn from Sues, 2019). Scale bars are A) 200 mm, B) 20 mm, C) 10 mm, D) 10 mm, E) 20 mm, F) 10 mm, G), 20 mm, H) 20 mm, I) 100 mm, J) 2 mm K) 20 mm.
FIGURE 8 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 8. Depth of water required for Spinosaurus to avoid the considerable effects of wave drag. Even with the hind limbs lifted up, the animal is nearly 3 m in dorsoventral height so to avoid wave drag (fully submerged by over 3.5 m) the water would need to be close to 6 m in depth for Spinosaurus to swim efficiently. This is a minimum and the real value is likely to be higher (see text for details). Outline modified from Ibrahim et al. (2020a) and scale bar equals 1 m.
FIGURE 4 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 4. Graph of theropod ungual curvature vs ungual length. The inset shows how the curvature of the unguals was measured. In lateral view a line AB is drawn between the ungual tip and the base. This is bisected by a perpendicular line until it contacts the ungual at point C. Lines are drawn from A to C and A to B and the internal angle measured. Unguals of Spinosaurus are in red, a further specimen attributed to a spinosaur is in yellow, and individual specimens are abbreviated as follows: Ab, abelisaurid; Ac, Acrocanthosaurus; Ai, Alioramus; Al, Allosaurus; Ca, Caudipteryx; Ce, ceratosaur; Co, Compsognathus; Di, Dilophosaurus; Ga, Gaulicho; Gg, Gigantoraptor; Gl, Gallimimus; Gu, Guanlong; Ha, Halszkaraptor; Ju, Juravenator; Ki, Kileskus; Li, Limusaurus; Mj, Majungasaurus; Sc, Spectrovenator; Sd, spinosaurid; Sn, Sinraptor; Sp, Spinosaurus; SB, Spinosaurus B; Tt, Tyrannotitan; Ty, Tyrannosaurus.
FIGURE 3 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 3. Graphs of various skull measurements to show the relationship between skull shape for different ecotypes. The red point is Spinosaurus, yellow are other spinosaurids, green are terrestrial taxa, pale blue are semi-aquatic and dark blue, fully aquatic animals. Least squares regressions are given for the terrestrial, semi-aquatic and aquatic datasets (the various spinosaurids were not included in these calculations), and the R2 values for these regressions are given.
FIGURE 2 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 2. Principal Components Analysis of various measurements of the skull rescaled to skull length. Principal Component 1 (83.5% of variance) plotted against Principal Component 2 (13.7% of variance), plotted using eigenvalue scale. The red point is Spinosaurus, yellow are other spinosaurids, green are terrestrial taxa, pale blue are semi-aquatic, and dark blue, fully aquatic animals. Silhouettes are from PhyloPic.org and color-coordinated with the lines of the convex hulls for the groups of taxa they represent: the red Suchomimus (representing Spinosauridae; red Xs), the light green Allosaurus (representing non-spinosaurid Theropoda; open light green circles), and the orange Paleorhinus (representing phytosaurs: light brown pluses) are by Scott Hartman; blue Peloneustes (representing Plesiosauria: solid dark blue circles) by Nobu Tamura; dark green Varanus (representing terrestrial lepidosaurs: green asterisks) and dark brown Crocodylus (representing Crocodyliformes: dark brown pluses) by Steven Traver. Additional taxa plot include thallatosuchians (solid light blue circles), the mosasauroid Plotosaurus (blue asterisk), the nothosauroid Lariosaurus (solid aqua circle), and freshwater semi-aquatic lepidosaurs (open orange squares). The inset shows a reptile skull and how measurements were taken for the data used here and in Figure 3.
FIGURE 1 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 1. Skeleton in a standing posture as if dip fishing in water following the wading model, and in a swimming posture (based on Ibrahim et al., 2020a) following the pursuit predator model. A non-exhaustive set of lines of evidence as described in the text are indicated by arrows that either directly support either model (white arrow), are ambiguous or do not contradict the model (grey arrow), or actively contradict the model (black arrow). Key traits are as follows: A) laterally compressed skull, B) nares position, C) mechanical jaw performance, D) orbit position, E) neck stiffness and posture, F) non-hydrodynamic shape, G) instability in water, H) sub-anguilliform locomotion, I) thin caudal neural spines, J) tail propulsion, K) distal tail flexibility, L) low swimming efficiency, M) somewhat reduced hind limbs, N) enlarged 1st toe, O) pachyostosis, P) pneumatic elements, Q) forelimbs not reduced, R) neck ventriflexion, S) quadrate shape, T) head posture (as determined for Irritator), U) isotopic data from teeth, V) tooth enamel ridges, W) rostral sensory system. Skeleton modified from the original by Genya Masukawa (used with permission) and scaled to the size of the neotype. Scale bar is 1 m.
FIGURE 5 in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 5. Comparison of skull shape of Spinosaurus and Baryonyx scaled to the same size. The two are very similar, which although this may be expected from their shared evolutionary history would suggest that they fundamentally forage in similar ways for similar prey, which contradicts the idea that one is an aquatic specialist. Not to scale.
FIGURE 7. A in Evaluating the ecology of Spinosaurus: Shoreline generalist or aquatic pursuit specialist?
FIGURE 7. A) Skull of a stork (Leptoptilos - scale bar is 100 mm) with a posteriorly retracted naris allowing them to forage while keeping the nares free of the water as in B) showing Ephipporhynchus senegalensis feeding. Although proportionally much further back here than in Spinosaurus, the absolute distance of the naris from the anterior tip of the jaw is less in the stork. C) Skull of crocodylian (Crocodylus - scale bar is 100 mm) with dorsally positioned naris allowing them to rest with minimal exposure of the head as in D) Crocodylus niloticus resting at the surface (image courtesy of Jonathan J. Meisenbach).
Data from: The spotted parrotfish genome provides evolutionary insight into the ecological adaptation of a keystone dietary specialist
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Data from: Distribution and protection of ecological specialists in Chinese terrestrial mammals
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Data from: We get by with a little help from our friends: shared adaptive variation provides a bridge to novel ecological specialists during adaptive radiation
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Data from: Linking niche theory to ecological impacts of successful invaders: insights from resource fluctuation-specialist herbivore interactions
1. Theories of species coexistence and invasion ecology are fundamentally connected and provide a common theoretical framework for studying the mechanisms underlying successful invasions and their ecological impacts. Temporal fluctuations in resource availability and differences in life-history traits between invasive and resident species are considered as likely drivers of the dynamics of invaded communities. Current critical issues in invasion ecology thus relate to the extent to which such mechanisms influence coexistence between invasive and resident species, and to the ability of resident species to persist in an invasive-dominated ecosystem. 2. We tested how a fluctuating resource and species traits differences may explain and help predict long-term impacts of biological invasions in forest specialist insect communities. We used a simple invasion system comprising closely related invasive and resident seed-specialized wasps (Hymenoptera: Torymidae) competing for a well-known fluctuating resource, and displaying divergent diapause, reproductive and phenological traits. 3. Based on extensive long-term field observations (1977-2010), we developed a combination of mechanistic and statistical models aiming to (i) obtain a realistic description of the population dynamics of these interacting species over time, and (ii) clarify the respective contributions of fluctuation-dependent and fluctuation-independent mechanisms to long-term impact of invasion on the population dynamics of the resident wasp species. 4. We showed that a fluctuation-dependent mechanism was unable to promote coexistence of the resident and invasive species. Earlier phenology of the invasive species was the main driver of invasion success, enabling the invader to exploit an empty niche. Phenology also had the greatest power to explain the long-term negative impact of the invasive on the resident species, through resource preemption. 5. This study provides strong support for the critical role of species differences in interspecific competition outcomes within animal communities. Our mechanisticstatistical approach allows disentangling the critical drivers of the dynamics of coexistence and exclusion within novel species assemblages, following both intentional and non-intentional species introductions.
Data from: No evidence for larger leaf trait plasticity in ecological generalists compared to specialists
Aim: Phenotypic plasticity is hypothesized to contribute to a species' capacity to occupy broader ranges of conditions and to optimally exploit resource-rich environments. Although this is supported by case studies of individual species, we do not know whether larger plasticity in functional traits is generally associated with ecological characteristics of species such as their niche breadth or niche position. Here, we test whether there is such a relationship for plasticity in leaf functional traits. Location: Central Europe. Methods: We surveyed 110–132 grassland plant species for plasticity in five leaf traits [leaf thickness, leaf greenness, specific leaf area, leaf dry matter content (LDMC) and plant height] and for biomass changes in response to experimental fertilization, shading and waterlogging. Trait plasticity and changes in biomass were compared with species niche characteristics along three environmental axes (light, nutrient and soil moisture) derived from a vegetation-plot database. Results: Although response of several traits to experimental treatments correlated with niche position and breadth (change in leaf thickness, greenness and biomass in response to fertilization; change in LDMC due to shading; and change in plant height and biomass due to waterlogging), we did not find evidence that species with broader niches or species from resource-rich environments are more plastic. Ecological generalists even turned out to be less plastic in some traits, including leaf thickness after fertilization and waterlogging. Generalists also displayed smaller plastic response averaged across all five traits ('composite plasticity'), though the relationship was not statistically significant. This composite plasticity was positively related to absolute change in biomass in all experimental treatments. Main conclusions: Our results suggest that larger species-level plasticity in leaf traits is not necessarily associated with a capacity to occupy a broader range of environments or with growth in resource-rich habitats; rather, it may indicate species' sensitivity to environmental changes.
Data from: Linking niche theory to ecological impacts of successful invaders: insights from resource fluctuation-specialist herbivore interactions
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Data from: No evidence for larger leaf trait plasticity in ecological generalists compared to specialists
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Supposed "snake specialist" consumes monitor lizards: diet and trophic implications of king cobra feeding ecology
<p>King cobra predation events on <em>Varanus nebulosus. </em>Included: photographic evidence of each event, king cobra biometric data from most recent measurements and location information.</p> <p>.csv file column headings:</p> <p>folderid: The Zenodo folder ID containing the photographic evidence of event.</p> <p>obvdate: Date of observation (yyyy-mm-dd)</p> <p>obvtime: Time of observation (24hr)</p> <p>snakeid: Unique ID given to individual king cobras captured</p> <p>svlmm: King cobra snout-to-vent length (mm)</p> <p>tlmm: King cobra tail length (mm)</p> <p>totalmm: King cobra total length (mm)</p> <p>massg: King cobra mass (g)</p> <p>easting: UTM easting (UTM Zone 47N; Datum WGS84)</p> <p>northing: UTM northing (UTM Zone 47N; Datum WGS84)</p> <p>gpsaccm: Accuracy of GPS location (m)</p> <p>notes: Comments on predation event</p>
Data from: The genetic architecture of a complex ecological trait: host plant use in the specialist moth, Heliothis subflexa
We used genetic mapping to examine the genetic architecture of differences in host plant use between two species of noctuid moths, Heliothis subflexa, a specialist on Physalis spp., and its close relative, the broad generalist H. virescens. We introgressed H. subflexa chromosomes into the H. virescens background and analyzed 1,462 backcross insects. The effects of H. subflexa-origin chromosomes were small when measured as the percent variation explained in backcross populations (0.2 to 5%), but were larger when considered in relation to the interspecific difference explained (1.5 to 165%). Most significant chromosomes had effects on more than one trait, and their effects varied between years, sexes, and genetic backgrounds. Different chromosomes could produce similar phenotypes, suggesting that the same trait might be controlled by different chromosomes in different backcross populations. It appears that many loci of small effect contribute to the use of Physalis by H. subflexa. We hypothesize that behavioral changes may have paved the way for physiological adaptation to Physalis by the generalist ancestor of H. subflexa and H. virescens.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
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OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.