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29 results for “fish sounds”

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zenodo48/100

Data: An experimental sound exposure study at sea: No spatial deterrence of free-ranging pelagic fish

<p>Data abstract:</p> <p>All data and scripts to replicate all plots and statistical results of the paper mentioned below. The data are sound recordings and processed echosounder data (raw echosounder data is available on request but &gt; 100 GB in size and require specialized software).</p> <p>&nbsp;</p> <p>Paper reference:</p> <p>Jeroen Hubert<span>,&nbsp;</span>Jozefien M. Demuynck<span>,&nbsp;</span>M. Rafa Remmelzwaal<span>,&nbsp;</span>Carlota Mu&ntilde;iz<span>,&nbsp;</span>Elisabeth Debusschere<span>,&nbsp;</span>Benoit Berges<span>,&nbsp;</span>Hans Slabbekoorn; An experimental sound exposure study at sea: No spatial deterrence of free-ranging pelagic fish.&nbsp;<em>J. Acoust. Soc. Am.</em>&nbsp;1 February 2024; 155 (2): 1151&ndash;1161.&nbsp;<a href="https://doi.org/10.1121/10.0024720" target="_blank" rel="noopener">https://doi.org/10.1121/10.0024720</a></p> <p>&nbsp;</p> <p>Paper abstract:</p> <p>Acoustic deterrent devices are used to guide aquatic animals from danger or toward migration paths. At sea,&nbsp;moderate sounds can potentially be used to deter fish to prevent injury or death due to acoustic overexposure. In&nbsp;sound exposure studies, acoustic features can be compared to improve deterrence efficacy. In this study, we played&nbsp;200&ndash;1600 Hz pulse trains from a drifting vessel and investigated changes in pelagic fish abundance and behavior by&nbsp;utilizing echosounders and hydrophones mounted to a transect of bottom-moored frames. We monitored fish presence and tracked individual fish. This revealed no changes in fish abundance or behavior, including swimming speed&nbsp;and direction of individuals, in response to the sound exposure. We did find significant changes in swimming depth&nbsp;of individually tracked fish, but this could not be linked to the sound exposures. Overall, the results clearly show that&nbsp;pelagic fish did not flee from the current sound exposures, and we found no clear changes in behavior due to the&nbsp;sound exposure. We cannot rule out that different sounds at higher levels elicit a deterrence response; however, it&nbsp;may be that pelagic fish are just more likely to respond to sound with (short-lasting) changes in school formation.</p> <p>&nbsp;</p> <p>&nbsp;</p>

opencc-by-4.0Dec 2023View details →
zenodo48/100

Finite amplitude sound propagation effects in volume backscattering measurements for fish abundance estimation

<p>The upload contains measurement and simulation data for finite-amplitude sound propagation effects in volume backscattering measurements. The experimental data are from a trawl survey conducted in the North Sea with R/V &quot;G. O. Sars&quot;, 6-7&nbsp;November 2004, passing several times over a group of Atlantic mackerel schools. The measurements are of the relative area backscattering coefficient, relative to 38 kHz, 2000 W power setting,&nbsp;at</p> <p>(1) 120 kHz with 250 W transmit power setting, 200 kHz with 120 W transmit power setting<br> (2) 120 kHz with 1000 W power setting, 200 kHz with 1000 W power setting.</p> <p>A&nbsp;Simrad EK60 echosounder system was used, alternating between the low (1) and high (2) power settings through&nbsp;the measurement series.</p> <p>The corresponding simulation data are calculated using the Bergen Code numerical solver of the KZK Equation. The medium parameters input to the simulations are based on CTD data from the field survey . The transducer and amplitude data were found by laboratory measurements on echo sounders of the same type as used in the survey.</p> <p>.m files are included for both .mat data files, with details on how to read the data.</p> <p>An article describing the data has been submitted by the authors to Acta Acustica, 2022.</p>

opencc-by-4.0Sep 2021View details →
zenodo40/100

FIG. 5. — A in Greek khrόmis between sound and smell. Anthropozoology of a fish

FIG. 5. — A, Chromis chromis (Linnaeus, 1758) and B, Umbrina cirrosa (Linnaeus, 1758) as reproduced in Aldrovandi (1613) after the original engravings in, respectively, Rondelet (1554) and Belon (1553). Notice the lack of proportion (common length for Chromis chromis is 13 cm vs 40 cm for Umbrina cirrosa; cf. Froese &amp; Pauly 2016). Image courtesy of Biblioteca Digitale Università di Bologna.

opencc-by-4.0Dec 2016View details →
zenodo40/100

FIG. 3 in Greek khrόmis between sound and smell. Anthropozoology of a fish

FIG. 3. — Shi drums (Umbrina cirrosa (Linnaeus, 1758)) in their natural environment (Image courtesy of Laguna Project).

opencc-by-4.0Dec 2016View details →
zenodo40/100

FIG. 4 in Greek khrόmis between sound and smell. Anthropozoology of a fish

FIG. 4. — Brown meagres (Sciaena umbra Linnaeus, 1758) in their natural environment (Image E. Sáez Goñalons &amp; V. Martínez Moll, wikimedia.org; CC BY 3.0).

opencc-by-4.0Dec 2016View details →
zenodo40/100

FIG. 2. — A in Greek khrόmis between sound and smell. Anthropozoology of a fish

FIG. 2. — A, Round-based zither (kithára). Detail from a red-figure vase painting, about 430 BCE – cf. Lexicon Iconographicum Mythologiae Classicae, Apollon 691a (Image by the author); B, Wide-eyed flounder, Bothus podas (Delaroche, 1809), a fish called kítharos by the ancient Greeks for its similarity to a roundbased kithára. Cf. Guasparri 2005: 216 (Image courtesy of Laguna Project).

opencc-by-4.0Dec 2016View details →
zenodo40/100

FIG. 1 in Greek khrόmis between sound and smell. Anthropozoology of a fish

FIG. 1 — Definiens and definiendum: a human finger compared to Solen marginatus Pulteney, 1799, one among other mollusks called dáktulos (lit. 'finger'), or όnux (lit. 'nail') in Ancient Greek – e.g., Thompson 1947: 184 (Image by the author).

opencc-by-4.0Dec 2016View details →
zenodo40/100

FIG. 6. — A in Greek khrόmis between sound and smell. Anthropozoology of a fish

FIG. 6. — A Mediterranean damselfish (Chromis chromis (Linnaeus, 1758)) in its natural environment (Image A. Kok, wikimedia.org;

opencc-by-4.0Dec 2016View details →
zenodo40/100

FIGURE 3 in An overview of fish bioacoustics and the impacts of anthropogenic sounds on fishes

FIGURE 3 Schematic drawing of the ear of Gadus morhua (anterior is to the left): (a) top view of the body showing the location of the ears in the cranial cavity as well as the proximity of the rostral end of the swim bladder to the ear; (b) lateral and (c) top view of the same ear. Each ear is set at an angle relative to the midline of the fish., The otolith organs,, the semicircular canals (enlarged areas are the ampullae regions that contain the sensory cells);, the dense calcarious otolith lying in close proximity to the sensory epithelium (). Also see Figure 4. Fig. © 2018 Anthony D. Hawkins, all rights reserved

opencc-by-4.0Apr 2019View details →
zenodo40/100

FIGURE 5 in An overview of fish bioacoustics and the impacts of anthropogenic sounds on fishes

FIGURE 5 The sensory epithelia of the end organs of the inner ear have numerous mechanoreceptive sensory hair cells. The apical ends of these cells, directed into the lumen of the epithelia, have ciliary bundles (inserts in the figure) consisting of a single kinocilium (longest of the cilia) and graded stereocilia. Bending of the ciliary bundle during sound stimulation results in neurotransmitter release to stimulate the 8th cranial nerve. The sensory cells on the otolith maculae are organized into orientation groups, with all of the cells in each group having their kinocilia in the same general direction. In this typical saccular epithelium (anterior to the left, dorsal to the top), the cilia on the rostral end are oriented rostrally or caudally, while the cells on the caudal end are oriented dorsally and ventrally., The approximate dividing lines between orientation groups)

opencc-by-4.0Apr 2019View details →
zenodo40/100

FIGURE 2 in An overview of fish bioacoustics and the impacts of anthropogenic sounds on fishes

FIGURE 2 Masking in the Gadus morhua and Salmo salar by ambient noise. The thresholds were determined using a pure tone signal at a frequency of 160 Hz. The ambient noise (natural sea noise, augmented by white noise from a loudspeaker) is expressed as the spectrum level at that same frequency (dB re 1 μPa/Hz). Closed symbols, thresholds to natural levels of ambient noise; open symbols, thresholds to anthropogenic noise. n.b., The thresholds in S. salar were only influenced by high noise levels, above the natural ambient levels of noise (data from Hawkins, 1993). Fig. © 2018 Anthony D. Hawkins, all rights reserved

opencc-by-4.0Apr 2019View details →
zenodo40/100

FIGURE 4 A in An overview of fish bioacoustics and the impacts of anthropogenic sounds on fishes

FIGURE 4 A frontal view of the head of Gadus morhua showing a section of the saccule (). The saccular chamber is filled with perilymph and contains the otolith (), which lies close to the sensory hair cells of the epithelium (macula). The hair cells are innervated by the eighth cranial nerve. Fig. © 2018 Anthony D. Hawkins, all rights reserved

opencc-by-4.0Apr 2019View details →
zenodo40/100

FIGURE 1 in An overview of fish bioacoustics and the impacts of anthropogenic sounds on fishes

FIGURE 1 Fish hearing sensitivity (thresholds) obtained under open sea, free-field, conditions in response to pure tone stimuli at different frequencies. The lower the thresholds (y-axis), the more sensitive the fish is to a sound. Thus, Clupea harengus has best hearing of all of these species over a wider range of frequencies. Note that the thresholds in Gadus morhua and C. harengus obtained under quiet conditions may be below natural ambient noise levels, especially at their most sensitive frequencies. In the presence of higher levels of noise, the thresholds would be raised, a phenomenon referred to as masking. Gadus morhua and C. harengus are sensitive to both sound pressure and particle motion, whereas Limanda limanda and Salmo salar are only sensitive to particle motion. The reference level for the particle velocity is based on the level that exists in a free sound field for the given sound pressure level. n.b., For the particle velocity levels in this figure to match the sound pressure levels in a free sound field it is necessary to calculate an appropriate particle velocity reference level. If the standard reference levels are used, then the curves will not match one another and so they are not included here to keep the figure relatively simple. Fig. © 2018 Anthony D. Hawkins, all rights reserved

opencc-by-4.0Apr 2019View details →
zenodo40/100

Stable isotopes reveal intertidal fish and crabs use shellfish farms as foraging habitat in Puget Sound, Washington

<p>This is the dataset used for my second thesis chapter. The data consists of carbon and nitrogen stable isotope data collected in 3 locations in North Puget Sound in 2020-2022. Locations are Samish Bay, Padilla Bay, and Drayton Harbor. Stable isotope data is presented in standard permil format, with values referenced from the Vienna Pee Dee Belemnite&nbsp;and atmospheric nitrogen standards, which are the international reference standards commonly used as isotopic references for carbon and nitrogen.&nbsp;</p> <p>Primary productivity samples, snails, oysters, and clams were collected by hand at low tide. Fish and crabs were collected via beach seine and crab pots deployed concurrently with seining.&nbsp;</p> <p>Samples were collected either within bivalve farms, or within eelgrass meadow reference sites outside of farmed areas.</p> <p>All code and data necessary to reproduce the analysis is available via&nbsp;my Github page.&nbsp;</p> <p>The metadata spreadsheet contains descriptions&nbsp;of each column in the datasheet.</p> <p>For more information, see my chapter 2&nbsp;thesis.</p>

opencc-by-4.0Jul 2023View details →
zenodo40/100

"The sound comes from a meadow in the Sierra Nevada Mountains in California. The meadow is at an elevation of 2400 meters near a mountain named Olancha Peak, which is 3700 meters in altitude. Ihave a group of friends with which Ibackpack (trek) into the mountains. Our goal was to spend some time in the mountains and hike to the top of Olancha Peak (…) By the time we reached the meadow, we were in a forest and there was still snow on the ground in some places. We took the trip in June of 2006. The Sierra Nevada Mountains are a large mountain range. Much of the range is protected by national parks or preserved areas we call 'wilderness areas' (…) Ihave been backpacking for nearly 40 years and Iwill hopefully continue with this challenging activity for 40 years more! Many of my friends are much younger than Iam and it gives me much satisfaction to be able to have as much or more stamina for this activity than they have! When we are on these trips, we hike up peaks, catch fish, drink some whiskey around campfires and enjoy our time in the beautiful solitude. My memories of this trip were of the steep, hot hike from the desert to the cool meadow; the overall beauty of the nature, the absolute solitude of our campsite near the meadow; the strenuous hike to the top of Olancha Peak; the camaraderie of my friends; and, of course the sound of the frogs in the meadow. The frog sounds were astounding to me and Iwould listen in awe of the creature's instinctual desire to reproduce and continue the existence of their kind. Surely there were different species in the meadow for some of the frog sounds were different than others. The sounds only occurred after the Sun went down for the evening. Istood next to the creek in the meadow and recorded the sounds using my digital camera." [Peter/plentz1960]16 in Collecting Sounds. Online Sharing of Field Recordings as Cultural Practice

"The sound comes from a meadow in the Sierra Nevada Mountains in California. The meadow is at an elevation of 2400 meters near a mountain named Olancha Peak, which is 3700 meters in altitude. Ihave a group of friends with which Ibackpack (trek) into the mountains. Our goal was to spend some time in the mountains and hike to the top of Olancha Peak (…) By the time we reached the meadow, we were in a forest and there was still snow on the ground in some places. We took the trip in June of 2006. The Sierra Nevada Mountains are a large mountain range. Much of the range is protected by national parks or preserved areas we call 'wilderness areas' (…) Ihave been backpacking for nearly 40 years and Iwill hopefully continue with this challenging activity for 40 years more! Many of my friends are much younger than Iam and it gives me much satisfaction to be able to have as much or more stamina for this activity than they have! When we are on these trips, we hike up peaks, catch fish, drink some whiskey around campfires and enjoy our time in the beautiful solitude. My memories of this trip were of the steep, hot hike from the desert to the cool meadow; the overall beauty of the nature, the absolute solitude of our campsite near the meadow; the strenuous hike to the top of Olancha Peak; the camaraderie of my friends; and, of course the sound of the frogs in the meadow. The frog sounds were astounding to me and Iwould listen in awe of the creature's instinctual desire to reproduce and continue the existence of their kind. Surely there were different species in the meadow for some of the frog sounds were different than others. The sounds only occurred after the Sun went down for the evening. Istood next to the creek in the meadow and recorded the sounds using my digital camera." [Peter/plentz1960]16

opencc-by-4.0Dec 2019View details →
zenodo36/100

Data & example videos: Exploring effects of sound on the time budget of fishes: an experimental approach with captive cod

<p>Data abstract:</p> <p>The daily proportions of time each individual fish spent foraging, swimming and being stationary, this data was used for the analysis in the reference below.</p> <p>&nbsp;</p> <p>Video abstract:</p> <p>Some example video clips from which the behavioural state of both individuals was scored.</p> <p>&nbsp;</p> <p>Conference proceeding abstract:</p> <p>To estimate population level effects of anthropogenic sound on fish, data on energy intake and expenditure is needed. We present an experimental design of a controlled behavioural experiment that allows to collect relatively long-term data on foraging and swimming behaviour of Atlantic cod during sound exposures. Data on such behavioural states can be used as proxies for energy intake and expenditure. The Atlantic cod exhibited natural foraging behaviour in the experimental basins and the design allowed for efficient scoring of the behaviour throughout the 6-day trials. We conducted a pilot of three trials and share the experimental design to encourage other researchers to collect data on (proxies for) energy intake and expenditure to aid estimation of population level effects of sound exposures.</p> <p>&nbsp;</p> <p>Reference:</p> <p>Hubert, J., Wille, D.A., Slabbekoorn, H.&nbsp;(2020)&nbsp;Exploring effects of sound on the time budget of fishes: an experimental approach with captive cod.&nbsp;Proceedings of Meetings on Acoustics. 37 (1). 010012. DOI:10.1121/2.0001253.</p>

opencc-by-4.0Jun 2020View details →
dryad36/100

Concentrations of estrogenic chemicals in fish and shellfish tissues from Puget Sound, WA

Open the record for dataset details and reuse information.

publicMay 2025View details →
dryad32/100

Data from: Replicate divergence between and within sounds in a marine fish: the copper rockfish (Sebastes caurinus)

The evolution of population structure in marine organisms and its relevance to conservation has recently received increasing attention. We tested the degree of genetic subdivision among ten populations of copper rockfish (Sebastes caurinus) representing paired samples of outer coast and the heads of five replicate sounds on the west coast of Vancouver Island, British Columbia using 17 microsatellite DNA loci. Overall, subdivision (FST) was low (FST = 0.031), but consistently higher between paired coast and head of inlet sites (mean FST = 0.047) compared to among five coast sites (mean FST = -0.001) or among the five head of inlet sites (mean FST = 0.026). Heterozygosity, allelic richness, and estimates of effective population size were also consistently lower in head of inlet sites than in coast sites. Bayesian analysis of population structure identified two genetic groups across all samples, a single genetic group amongst only coast samples, two genetic groups amongst head of inlet samples, and two genetic groups within each sound analysed separately. Head of inlet copper rockfish were also consistently shorter with lower condition factors, and grew more slowly than fish collected from coast sites. Our results implicate coast- head of inlet habitat transitions in driving the evolution of population structure, likely resulting from reduced physical connectivity and selection against immigrants in contrasting environments. Coast sites appear to be well served by existing marine protected areas. By contrast, head of inlet sites may require more specific local conservation measures as they appear to be less well connected to adjacent coast sites as well as to each other.

opencc-zeroDec 2012View details →
dryad32/100

Data from: Predatory fish sounds can alter crab foraging behavior and influence bivalve abundance

The risk of predation can have large effects on ecological communities via changes in prey behaviour, morphology and reproduction. Although prey can use a variety of sensory signals to detect predation risk, relatively little is known regarding the effects of predator acoustic cues on prey foraging behaviour. Here we show that an ecologically important marine crab species can detect sound across a range of frequencies, probably in response to particle acceleration. Further, crabs suppress their resource consumption in the presence of experimental acoustic stimuli from multiple predatory fish species, and the sign and strength of this response is similar to that elicited by water-borne chemical cues. When acoustic and chemical cues were combined, consumption differed from expectations based on independent cue effects, suggesting redundancies among cue types. These results highlight that predator acoustic cues may influence prey behaviour across a range of vertebrate and invertebrate taxa, with the potential for cascading effects on resource abundance.

opencc-zeroDec 2013View details →
dryad32/100

Data from: Fish sound production in the presence of harmful algal blooms in the eastern Gulf of Mexico

This paper presents the first known research to examine sound production by fishes during harmful algal blooms (HABs). Most fish sound production is species-specific and repetitive, enabling passive acoustic monitoring to identify the distribution and behavior of soniferous species. Autonomous gliders that collect passive acoustic data and environmental data concurrently can be used to establish the oceanographic conditions surrounding sound-producing organisms. Three passive acoustic glider missions were conducted off west-central Florida in October 2011, and September and October 2012. The deployment period for two missions was dictated by the presence of red tide events with the glider path specifically set to encounter toxic Karenia brevis blooms (a.k.a red tides). Oceanographic conditions measured by the glider were significantly correlated to the variation in sounds from six known or suspected species of fish across the three missions with depth consistently being the most significant factor. At the time and space scales of this study, there was no detectable effect of red tide on sound production. Sounds were still recorded within red tide-affected waters from species with overlapping depth ranges. These results suggest that the fishes studied here did not alter their sound production nor migrate out of red tide-affected areas. Although these results are preliminary because of the limited measurements, the data and methods presented here provide a proof of principle and could serve as protocol for future studies on the effects of algal blooms on the behavior of soniferous fishes. To fully capture the effects of episodic events, we suggest that stationary or vertically profiling acoustic recorders and environmental sampling be used as a complement to glider measurements.

opencc-zeroDec 2014View details →

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