Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

6

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

6 results for “gene wiki”

Learn how ShareScore rates datasets ↗
zenodo40/100

Wikidata 3 Topical Subsets (Gene Wiki, Music, Ships) and 4 Random Subsets

<p>This dataset contains the N-Triples files of 3 Wikidata topical subsets corresponding to 3 Wikidata WikiProject: Gene Wiki, Music, and Ships along with 4 random subsets in different sizes: two of 100K items, one 500K items, and one 1M items. Subsets are extracted from the <a href="https://academictorrents.com/details/229cfeb2331ad43d4706efd435f6d78f40a3c438">3 January 2022 dump</a>. All subsets have been extracted with <a href="https://github.com/seyedahbr/wdumper">WDumper</a> using these <a href="https://github.com/seyedahbr/RQSS_Evaluation/tree/main/WDumper%20Specification%20Files">JSON specification files</a>. The files are:</p> <ul> <li>GeneWiki.zip: contains 25 `.nt.gz` RDF files each of which corresponds to one of the main Gene Wiki WikiProject classes, e.g. protein, gene, chemical compound, etc.</li> <li>music.nt.gz: the RDF file corresponding to the Music WikiProject.</li> <li>ships.nt.gz: the RDF file corresponding to the Ships WikiProject.</li> <li>Random100K_1.zip: contains 2 `nt.gz` RDF files each of which includes (about) 50,000 random Wikidata items, 100,000 items in total.</li> <li>Random100K_2.zip: contains 2 `nt.gz` RDF files each of which includes (about) 50,000 random Wikidata items, 100,000 items in total.</li> <li>Random500K.zip: contains 10 `nt.gz` RDF files each of which includes (about) 50,000 random Wikidata items, 500,000 items in total.</li> <li>Random1M.zip: contains 20 `nt.gz` RDF files each of which includes (about) 50,000 random Wikidata items, 1,000,000 items in total.</li> </ul> <p>&nbsp;</p>

opencc-byNov 2022View details →
zenodo40/100

Output files of the RQSS extractor and framework on 3 Topical (Gene Wiki, Music, Ships) subsets and 4 Random Subsets

<p>This dataset contains the `.csv` output files of the Referencing Quality Scoring System - RQSS performed on 3 topical subsets (Gene Wiki, Music, Ships) and 4 random subsets. Subset RDF files are in <a href="https://doi.org/10.5281/zenodo.7332161">this dataset</a>.</p>

opencc-byNov 2022View details →
zenodo36/100

Gene Wiki subsets

<p>Gene Wiki Subset of Wikidata created with wdsub (https://github.com/weso/wdsub).</p> <p>Subsets are described using Shape Expressions: https://github.com/weso/genewikisub/tree/master/shex/directP31</p> <p>Input: https://dumps.wikimedia.org/wikidatawiki/entities/latest-all.json.gz downloaded between 2021/12/06 10:26:10 pm (CET) and 2021/12/07 08:40:42 am (CET)</p>

opencc-by-4.0Dec 2021View details →
zenodo36/100

Wikidata Subsets of 4 Gene Wiki Classes

<p>Chemical compound&nbsp;(Q11173), disease (Q12136), gene (Q7187), and protein (Q8054) are some of the main classes containing the Gene Wiki WikiProjects. In this repository, we put the corresponding&nbsp;subsets of each class. The subsets contain all instances of the four main classes (no sub-classes). All subsets are extracted from the Wikidata JSON dump of 3 January 2022 (<a href="https://t.co/vdmJc8V1v2">https://t.co/vdmJc8V1v2</a>)</p>

opencc-byFeb 2022View details →
zenodo36/100

Wikidata Subsets of 4 Gene Wiki Classes (wdsub)

<p>Chemical compound&nbsp;(Q11173), disease (Q12136), gene (Q7187), and protein (Q8054) are some of the main classes containing the Gene Wiki WikiProjects. In this repository, we put the corresponding&nbsp;subsets of each class. The subsets contain all instances of the four main classes (no sub-classes). All subsets are extracted from the Wikidata JSON dump of 3 January 2022 (<a href="https://t.co/vdmJc8V1v2">https://t.co/vdmJc8V1v2</a>) using wdsub (https://github.com/weso/wdsub)</p>

opencc-by-4.0Mar 2022View details →
zenodo36/100

Wikidata Subsets of 6 Wikiproject (Gene Wiki, Taxonomy, Astronomy, Music, Law, Ships)

<p>This dataset contains the N-Triples files of 6 Wikidata subsets corresponding to 6 different Wikidata WikiProject extracted from October 2016 and June 2021 dumps. For each project, there are .nt.gz files containing RDF data. The projects are:</p> <ul> <li>Gene Wiki: There is a GeneWiki_2016.zip (extracted from the 2016 dump) and a GeneWiki_2021.zip (extracted from the 2021 dump), Each of which contains 25 .nt.gz files extracted by the WDumper tool.</li> <li>Astronomy: Astronomy_2016.nt.gz (extracted from the 2016 dump) and Astronomy_2021.nt.gz (extracted from the 2021 dump).</li> <li>Taxonomy: There is a Taxonomy_2016.zip (extracted from the 2016 dump) and a Taxonomy_2021.zip (extracted from the 2021 dump), Each of which contains two .nt.gz files.</li> <li>Law: Law_2016.nt.gz (extracted from the 2016 dump) and Law_2021.nt.gz (extracted from the 2021 dump).</li> <li>Music: Music_2016.nt.gz (extracted from the 2016 dump) and Music_2021.nt.gz (extracted from the 2021 dump).</li> <li>Ships: Ships_2016.nt.gz (extracted from the 2016 dump) and Ships_2021.nt.gz (extracted from the 2021 dump).</li> </ul> <p>&nbsp;</p> <ul> </ul>

opencc-byJul 2021View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record