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4 results for “historical manuscripts”
Historic manuscript page images with noisy labels
<p>Images of digitised manuscript pages sourced from <a href="https://iiif.biblissima.fr/collections/">https://iiif.biblissima.fr/collections/</a>. This dataset aims to facilitate experiments using existing data/metadata to train computer vision models. In particular, using 'noisy' labels in some capacity.</p> <p>Each image is taken from a page of a manuscript listed on <a href="https://iiif.biblissima.fr/collections/">https://iiif.biblissima.fr/collections/</a>. Each example includes the labels included in the IIIF manifests for these images. The data includes the following columns:</p> <ul> <li>image: an IIIF URL for the image</li> <li>manifest_url: A URL for the IIIF manifest for the image</li> <li>license: for each image</li> <li>label: the text found in the manifest 'label' field.</li> <li>attribution: which institution the image comes from</li> </ul> <p> </p> <p> </p>
Data for the manuscript: Historical biogeography of Pomaderris (Rhamnaceae): continental vicariance in Australia and repeated independent dispersals to New Zealand
<p>Gondwanan biogeographic patterns include a combination of old vicariance events following the breakup of the supercontinent, and more recent long-distance dispersals across the southern landmasses. Floristic relationships between Australia and New Zealand have mostly been attributed to recent dispersal events rather than vicariance. We assessed the biogeographic history of Pomaderris (Rhamnaceae), which occurs in both Australia and New Zealand, by constructing a time-calibrated molecular phylogeny to infer (1) phylogenetic relationships and (2) the relative contributions of vicariance and dispersal events in the biogeographic history of the genus. Using hybrid capture and high throughput sequencing, we generated nuclear and plastid data sets to estimate phylogenetic relationships and fossil calibrated divergence time estimates for Pomaderris . BioGeoBEARS and biogeographical stochastic mapping (BSM) were used to assess the ancestral area of the genus and the relative contributions of vicariance vs dispersal, and the directionality of dispersal events. Our analyses indicate that Pomaderris originated in the Oligocene and had a widespread Australian distribution. Vicariance of western and eastern Australian clades coincides with the uplift of the Nullarbor Plain c. 14 Ma, followed by subsequent in-situ and within-biome diversification with little exchange across regions. A rapid radiation of southeastern Australian taxa beginning c. 10 Ma was the source for at least six independent long-distance dispersal events to New Zealand during the Pliocene–Pleistocene. Our study demonstrates the importance of dispersal in explaining not only the current cross-Tasman distributions of Pomaderris, but for the New Zealand flora more broadly. The pattern of multiple independent long-distance dispersal events for Pomaderris , without significant radiation within New Zealand, is congruent with other lowland plant groups, suggesting that this biome has a different evolutionary history compared with the younger alpine flora of New Zealand, which exhibits extensive radiations often following single long distance dispersal events.</p>
Data for the manuscript: Historical biogeography of Pomaderris (Rhamnaceae): continental vicariance in Australia and repeated independent dispersals to New Zealand
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Word-zone ROI IDs+txt for the Monk historical manuscript collection / June 2018
<p>Checkpointed state of the labeling situation in the Monk e-Science service for handwritten document indexing as of June 2018. The reason for the upload is the migration from the IBM gpfs system of the Target project (EU/SNN) to a new Lustre file system of the CIT of the university of Groningen. This valuable indexing information contains 'the human' labels for regions of interest on page scans. However, the original images are needed to make sense of this. In case of a calamity, they very often can be reconstructed because the orginal scan file names by the archives and institutions are maintained. The amount of image data would be too much for uploading to Zenodo, too.</p> <p>Example data portion:</p> <p>Monk internal ID with embeded x,y,w,h of ROIs,<br> followed by <txt>label....</txt> <br> Word zones are of the type RECOG or HUMAN.</p> <p><sub>navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=0285-y=0359-w=1216-h=<br> 0094-ybas=0433-nink=174-ns=2-segm=COCOS8cocos <txt>0,</txt><br> navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=0285-y=0430-w=0020-h=<br> 0023-ybas=0433-nink=114-ns=1-segm=COCOS8cocos <txt>x</txt><br> navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=1487-y=0243-w=0339-h=<br> 0215-ybas=0433-nink=7762-ns=8-segm=COCOS8cocos <txt>Dadap</txt><br> navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=1487-y=0243-w=0384-h=<br> 0215-ybas=0433-nink=7690-ns=3-segm=COCOS8cocos <txt>Dadap</txt><br> navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=1487-y=0243-w=0396-h=<br> 0215-ybas=0433-nink=8614-ns=9-segm=COCOS8cocos <txt>Mandor's</txt><br> navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=1487-y=0244-w=0237-h=<br> 0214-ybas=0433-nink=7758-ns=7-segm=COCOS8cocos <txt>@Tropinatus</txt><br> navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=1487-y=0245-w=0228-h=<br> 0213-ybas=0433-nink=7708-ns=6-segm=COCOS8cocos <txt>Pati</txt><br> navis-NNM001001033_0001-line-001-y1=44-y2=552-zone-RECOG-x=1487-y=0246-w=0223-h=<br> 0212-ybas=0433-nink=7705-ns=5-segm=COCOS8cocos <txt>@Tropinatus</txt></sub></p> <p> </p>
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