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opencc-by-4.0Dec 2023View details →

Dataset for: Climate and shared evolutionary history drive trait variation among species of Neotropical understory monocots

Dataset and p-values form phylogenetically generalized least square models accompanying the manuscript "Climate and shared evolutionary history drive trait variation among species of Neotropical understory monocots".

opencc-by-4.0Dec 2023View details →

Text-fig. 4. Monocots. a, b: Large monocot leaf part and counterpart, UAPC-ALTA S 17955A, B. a: Wide leaf showing entire margin at left. b: Counterpart showing dark wide midrib, and and secondaries parallel to one another, arising at low acute angle. c–e: Monocot leaf with parallel venation. c: Overview of elongate monocot leaf with parallel veins horizontal and linear to oval structures and smaller leaf fragment of same type lacking them (at lower right), UAPC-ALTA S 59491. d: Higher magnification of the smaller fragment with weak cross veins. e: Higher magnification of larger specimen with linear to oval structures between parallel veins. f, g: Monocot leaf with parallel venation. Fig. (f) shows higher magnification and (g) shows overview, BBM-PAL-P000009. Scale bars: a, b = 5 cm, c = 4 cm, d–f = 1 cm, g = 2 cm. in The Early Eocene Flora Of Horsefly, British Columbia, Canada And Its Phytogeographic Significance

Text-fig. 4. Monocots. a, b: Large monocot leaf part and counterpart, UAPC-ALTA S 17955A, B. a: Wide leaf showing entire margin at left. b: Counterpart showing dark wide midrib, and and secondaries parallel to one another, arising at low acute angle. c–e: Monocot leaf with parallel venation. c: Overview of elongate monocot leaf with parallel veins horizontal and linear to oval structures and smaller leaf fragment of same type lacking them (at lower right), UAPC-ALTA S 59491. d: Higher magnification of the smaller fragment with weak cross veins. e: Higher magnification of larger specimen with linear to oval structures between parallel veins. f, g: Monocot leaf with parallel venation. Fig. (f) shows higher magnification and (g) shows overview, BBM-PAL-P000009. Scale bars: a, b = 5 cm, c = 4 cm, d–f = 1 cm, g = 2 cm.

opencc-by-4.0Apr 2022View details →

Supplementary files for, 'Developmental morphology and anatomy shed light on both parallel and convergent evolution of the umbellate inflorescence in Monocots, underlied by a new variant of metatopy.'

Supplementary file for forth coming manuscript. Consists of Pre-processed microscopy images, FiJI readable annotated stacks and raw laser ablation tomography video data   File name:  MainFigures.zip  File format: .zip, individual images in .bmp format. Description of data: Picolay output of main figure panels.   File name:  Supplementary_File_1 File format: .MOV (video) Description of data: Movie 1 LAT scan of Butomus umbellatus   File name:  Supplementary_File_2 File format: .AVI (video) Description of data: Three-dimensional reconstruction of Butomus umbellatus inflorescence   File name:  Supplementary_File_3 File format: .MOV (video) Description of data: Movie 3 Three-dimensional reconstruction of Butomus umbellatus vasculature   File name:  Supplementary_File_4 File format: .TIFF (Can be opened in FIJI) Description of data: Butomus umbellatus vasculature composite tiff file   File name:  Supplementary_File_5 File format: .MOV (video) Description of data: LAT scan of Ornithogalum umbellatum   File name:  Supplementary_File_6 File format: .TIFF (Can be opened in FIJI) Description of data: Ornithogalum umbellatum vasculature tiff file (Can be opened in FIJI)   File name: Supplementary_File_7 File format: .MOV (video) Description of data: LAT scan of Allium hollandicum inflorescence

Text-fig. 6. Most parsimonious tree obtained after addition of Acaciaephyllum to the data set of Doyle (2008), with modifications discussed in the text, and with relationships of other taxa fixed with a backbone constraint tree based on results of Doyle (2008). Relative parsimony of alternative positions of Acaciaephyllum is indicated as in Text-fig. 2. Gnet = Gnetales. in Early Cretaceous Monocots: A Phylogenetic Evaluation

Text-fig. 6. Most parsimonious tree obtained after addition of Acaciaephyllum to the data set of Doyle (2008), with modifications discussed in the text, and with relationships of other taxa fixed with a backbone constraint tree based on results of Doyle (2008). Relative parsimony of alternative positions of Acaciaephyllum is indicated as in Text-fig. 2. Gnet = Gnetales.

Text-fig. 4. Most parsimonious trees obtained after addition of Virginianthus (with "Liliacidites" minutus pollen) to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of Virginianthus is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation

Text-fig. 4. Most parsimonious trees obtained after addition of Virginianthus (with "Liliacidites" minutus pollen) to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of Virginianthus is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1.

Text-fig. 2. Representative most parsimonious trees obtained after addition of Liliacidites to (A) the D&E tree (Text-fig. 1) and (B) the J/M tree, with relationships among major clades based on the plastid genome analyses of Jansen et al. (2007) and Moore et al. (2007). Thicker lines indicate all most parsimonious (MP), one step less parsimonious (MP+1), and two step less parsimonious (MP+2) positions for Liliacidites. Abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation

Text-fig. 2. Representative most parsimonious trees obtained after addition of Liliacidites to (A) the D&E tree (Text-fig. 1) and (B) the J/M tree, with relationships among major clades based on the plastid genome analyses of Jansen et al. (2007) and Moore et al. (2007). Thicker lines indicate all most parsimonious (MP), one step less parsimonious (MP+1), and two step less parsimonious (MP+2) positions for Liliacidites. Abbreviations as in Text-fig. 1.

Text-fig. 3. One of two most parsimonious trees obtained after addition of Anacostia (with Similipollis pollen) to the D&E tree. Relative parsimony of alternative positions of Anacostia is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation

Text-fig. 3. One of two most parsimonious trees obtained after addition of Anacostia (with Similipollis pollen) to the D&E tree. Relative parsimony of alternative positions of Anacostia is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1.

Text-fig. 1. D&E tree of Endress and Doyle (2009), from the combined morphological and molecular analysis of Doyle and Endress (2000), with modifications based on more recent data, showing the inferred evolution of the reticulum grading character (39). Boxes under names of taxa indicate their character state; shading of branches indicates their reconstructed state based on parsimony optimization with MacClade (Maddison and Maddison 2003). Nymph = Nymphaeales, Aust = Austrobaileyales, Chlor = Chloranthaceae, Piper = Piperales, Ca = Canellales, Magnol = Magnoliales. in Early Cretaceous Monocots: A Phylogenetic Evaluation

Text-fig. 1. D&E tree of Endress and Doyle (2009), from the combined morphological and molecular analysis of Doyle and Endress (2000), with modifications based on more recent data, showing the inferred evolution of the reticulum grading character (39). Boxes under names of taxa indicate their character state; shading of branches indicates their reconstructed state based on parsimony optimization with MacClade (Maddison and Maddison 2003). Nymph = Nymphaeales, Aust = Austrobaileyales, Chlor = Chloranthaceae, Piper = Piperales, Ca = Canellales, Magnol = Magnoliales.

Text-fig. 5. Most parsimonious trees obtained after addition of the Pennipollis plant to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of the Pennipollis plant is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation

Text-fig. 5. Most parsimonious trees obtained after addition of the Pennipollis plant to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of the Pennipollis plant is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1.

Text-fig. 3. Schematic section through the Żyttawa (Zittau) Basin, on the Czech and Polish boundary; Hrádek n. Nisou and Turów parts of the basin. Explanation of the symbols. 1 – Overlying strata with the upper coal seam, 2 – middle and lower strata with the coal seam (Miocene), 3 – first sedimentary setting with basal coal seam (Miocene / Oligocene), 4 – alcalic volcanism (Tertiary), 5 – Upper Cretaceous deposits, 6 - underlying rocks of the basin. (Adapted after Václ 1967, Václ and Čadek, 1962, modified). in Some Monocot Pollen Taxa From The Lower Miocene Basal Coaly Deposits Of The Czech And Polish Parts Of The Żytawa (Zittau) Basin

Text-fig. 3. Schematic section through the Żyttawa (Zittau) Basin, on the Czech and Polish boundary; Hrádek n. Nisou and Turów parts of the basin. Explanation of the symbols. 1 – Overlying strata with the upper coal seam, 2 – middle and lower strata with the coal seam (Miocene), 3 – first sedimentary setting with basal coal seam (Miocene / Oligocene), 4 – alcalic volcanism (Tertiary), 5 – Upper Cretaceous deposits, 6 - underlying rocks of the basin. (Adapted after Václ 1967, Václ and Čadek, 1962, modified).

Text-fig. 1. Geographical position of the Zittau (Żyttava) Basin at the boundary between Poland and the Czech Republic (Bohemia). in Some Monocot Pollen Taxa From The Lower Miocene Basal Coaly Deposits Of The Czech And Polish Parts Of The Żytawa (Zittau) Basin

Text-fig. 1. Geographical position of the Zittau (Żyttava) Basin at the boundary between Poland and the Czech Republic (Bohemia).

Text-fig. 2. Sketch map of the Żytawa / Zittau Basin showing the Polish (Turów) and Czech (Hrádek) parts. Bogatynia (E of Rybarzowice) and Hrádek sites refer to the areas of the deepest depressions of the eastern and southern parts of the basin. in Some Monocot Pollen Taxa From The Lower Miocene Basal Coaly Deposits Of The Czech And Polish Parts Of The Żytawa (Zittau) Basin

Text-fig. 2. Sketch map of the Żytawa / Zittau Basin showing the Polish (Turów) and Czech (Hrádek) parts. Bogatynia (E of Rybarzowice) and Hrádek sites refer to the areas of the deepest depressions of the eastern and southern parts of the basin.

Fig. 47 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)

Fig. 47. Isolectotype of Carex capricornis Meinsh. ex Maxim. var. capitata Maxim. (LE 01012320; KPMNX0001323).

Fig. 46 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)

Fig. 46. Lectotype of Carex capricornis Meinsh. ex Maxim. var. capitata Maxim. (LE 01012319; KPM-NX0001322).

Fig. 37 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)

Fig. 37. Lectotype (LE 01012432) and syntype (LE 01012430) of Eriocaulon alpestre Hook.f. & Thomson ex Körn. var. robustium Maxim. (KPM-NX0001310).

Fig. 36 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)

Fig. 36. Syntype of Polygonatum giganteum A. Dietr var. macranthum Maxim. (LE 01012153; KPMNX0001304).

Fig. 32 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)

Fig. 32. Syntypes of Lycoris sanguinea Maxim. (LE 01012637, LE 01012635, LE 01012636; KPMNX0001294).

Fig. 4 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)

Fig. 4. Syntype of Aspidium craspedosorum Maxim. var. japonicum Maxim. (LE 01009865; KPM-NX0001854).

Fig. 6 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)

Fig. 6. Lectotype (LE 01011614) and syntype (LE 01011615) of Chamaecyparis breviramea Maxim. (KPMNX0001841).