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7 results for “plant circadian clock”
Data associated with the manuscript "Complex epistatic interactions between ELF3, PRR9, and PRR7 regulates the circadian clock and plant physiology"
<p>Datasets associated with the figures in the paper entilted: "<strong>Complex epistatic interactions between ELF3, PRR9, and PRR7 regulates the circadian clock and plant physiology"</strong></p>
Plant circadian clock control of Medicago truncatula nodulation involving regulation of Nodule Cysteine-Rich genes
<p>Legumes house nitrogen-fixing endosymbiotic rhizobia in specialized polyploid cells within root nodules, which undergo tightly regulated metabolic activity. By carrying out expression analysis of transcripts over time in Medicago truncatula nodules we found that the circadian clock enables coordinated control of metabolic and regulatory processes linked to nitrogen fixation. This involves the circadian clock-associated transcriptional factor LATE ELONGATED HYPOCOTYL (LHY), with lhy mutants being affected in nodulation. Rhythmic transcripts in root nodules include a subset of Nodule-specific Cysteine Rich peptides (NCRs) that have the LHY-bound conserved Evening Element in their promoters. Until now, studies have suggested that NCRs act to regulate bacteroid differentiation and keep the rhizobial population in check. However, these conclusions came from the study of a few members of this very large gene family that has complex diversified spatio-temporal expression. We suggest that rhythmic expression of NCRs may be important for temporal coordination of bacterial activity with the rhythms of the plant host, in order to ensure optimal symbiosis.</p>
Plant circadian clock control of Medicago truncatula nodulation involving regulation of Nodule Cysteine-Rich genes
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The Circadian Clock in the Ageing Plant
GEO Series GSE242964. Arabidopsis thaliana. 63 samples. Type: Expression profiling by high throughput sequencing.
A photoregulatory mechanism of the circadian clock in plants [MeRIP-seq]
GEO Series GSE152465. Arabidopsis thaliana. 24 samples. Type: Other.
A photoregulatory mechanism of the circadian clock in plants [RNA-seq]
GEO Series GSE152464. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
A photoregulatory mechanism of the circadian clock in plants
GEO Series GSE152466. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.