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43 results for “plant community dynamics”
Figure 3 in Temporal dynamics of invertebrate and aquatic plant communities at three intermittent ponds in livestock grazed Patagonian wetlands
Figure 3. Seasonal variation of total taxa richness (A), mean density (A), and relative contribution of biomass (B) of most abundant groups of aquatic invertebrates at three ponds in a Patagonian wetland (Mallín Crespo) during the study period (May 2008 to April 2009). Livestock stocking period is indicated by the black bar.
Plant Species Composition percent cover:Nutrient Network: A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Light Availability:Nutrient Network: A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Aboveground Standing Crop Biomass:Nutrient Network A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Plant and soil organic matter responses to ten years of nutrient enrichment in the Nutrient Network:Nutrient Network. A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Plant above and belowground biomass across an N fertilization gradient after 13 years of fertilization:Nutrient Network. A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Net ecosystem exchange measurements throughout the 2020 growing season across an N fertilization gradient:Nutrient Network. A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Data from: Rate of permafrost thaw and associated plant community dynamics in peatlands of northwestern Canada
<p>This dataset was collected to document the changing plant community, and associated environmental factors, as warming climate conditions accelerate permafrost thaw in northern peatland environments. Due to the insulative properties of dry, surface peat layers, discontinuous permafrost is preferentially found in peatlands, termed peat plateaux, where the volumetric expansion of ice-rich permafrost has resulted in a raised, dry ground surface dominated by lichens and, often, stunted black spruce forests. As ground temperatures warm, and the ice-rich permafrost thaws, the ground surface sinks to, or below, the water table, and these peat plateau environments change dramatically from black spruce and lichen-dominated peat plateaux to treeless moss- and sedge-dominated collapse scar environments. Data are from a set of 17 sites distributed along a latitudinal gradient in the Mackenzie Valley of Northwestern Canada. At each site, a transect of five to nine contiguous 1x1m quadrats was sampled, spanning the transition from peat plateau to collapse scar environments and, thus, capturing the zone of active permafrost thaw within peat plateaux as they transition to collapse scars. Fourteen of these sites were sampled at two time periods: 2007 and 2008 (T1: time 1), and 2017 and 2018 (T2: time 2) enabling an assessment of 10-year changes (9 years for one site). This dataset includes quadrat-level measurements of plant community composition (percent cover by species), frost depth, water table depth, peat depth, soil moisture, and canopy cover. Site level measurements consist of maximum peat depth, along with pH and electrical conductivity of collapse scar water samples, as well as the annual rate of lateral permafrost thaw. We also include basic site location parameters, as well as several climatic parameters, interpolated for each site using BioSIM software.</p>
Metabolomics dataset for disentangling plant and environment-mediated drivers of active rhizosphere 1 bacterial community dynamics during short-term drought
Open the record for dataset details and reuse information.
Data from: Rate of permafrost thaw and associated plant community dynamics in peatlands of northwestern Canada
Open the record for dataset details and reuse information.
Plant aboveground biomass data: Herbivory by Nitrogen Interactive Effects on Community and Ecosystem Processes and Dynamics
E172 is an herbivory experiment established by Dave Tilman in fall 2004 by enclosing in deer fences three randomly selected plots from the six replicates of each control and each treatment in the N addition E001 experiment in field C. These plots still receive the nutrient treatments prescribed in the Experiment 001 protocols. From 1982-2004 a fence containing all of e001 plots in Field C was designed to exclude deer and all small mammals, including mice, voles and pocket gophers. This fence was removed in Fall of 2004 and individual plots designated for e172 were enclosed in deer fences. The purpose of E001 was to measure how adding nitrogen over a long time would affect the number of species, the type of species present, the amount of annual growth, and the change from year to year in the growth of each species in a plant community which is also relieved of grazing by large and small mammals. There are 8 different levels of nitrogen addition with other nutrients added to ensure that nitrogen remains the limiting nutrient, and a control which receives no nutrients. The plots are in a 6 by 9 grid and are 4 by 4 meters in size with 1 meter aisles between plots. Nitrogen fertilizer (NH4NO3) is applied twice per year, once in early May and once in late June.
Plant aboveground biomass carbon and nitrogen: Herbivory by Nitrogen Interactive Effects on Community and Ecosystem Processes and Dynamics
E172 is an herbivory experiment established by Dave Tilman in fall 2004 by enclosing in deer fences three randomly selected plots from the six replicates of each control and each treatment in the N addition E001 experiment in field C. These plots still receive the nutrient treatments prescribed in the Experiment 001 protocols. From 1982-2004 a fence containing all of e001 plots in Field C was designed to exclude deer and all small mammals, including mice, voles and pocket gophers. This fence was removed in Fall of 2004 and individual plots designated for e172 were enclosed in deer fences. The purpose of E001 was to measure how adding nitrogen over a long time would affect the number of species, the type of species present, the amount of annual growth, and the change from year to year in the growth of each species in a plant community which is also relieved of grazing by large and small mammals. There are 8 different levels of nitrogen addition with other nutrients added to ensure that nitrogen remains the limiting nutrient, and a control which receives no nutrients. The plots are in a 6 by 9 grid and are 4 by 4 meters in size with 1 meter aisles between plots. Nitrogen fertilizer (NH4NO3) is applied twice per year, once in early May and once in late June.
2007 pre-treatment soils pH, nutrients, texture:Nutrient Network: A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Multi-site grassland plant biomass, species richness and light (PAR):e247: Nutrient Network: A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Nutrient Network Oak Litter Decomposition:Nutrient Network. A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
In situ soil respirations throughout the 2020 growing season across an N fertilization gradient:Nutrient Network. A cross-site investigation of bottom-up control over herbaceous plant community dynamics and ecosystem function.
This experiment is one implementation of a globally distributed experiment, known as the Nutrient Network. At Cedar Creek, as in over 70 other sites in grasslands around the world, the experiment aims to describe impacts of increased nutrients (nitrogen, phosphorus, potassium, sulfur and other metals) and decreased herbivory (removal of mammals by fencing). Two overarching questions are being explored with these manipulations: 1. To what extent are plant production and diversity co-limited by multiple nutrients in herbaceous-dominated communities? 2. Under what conditions do grazers or fertilization control plant biomass, diversity, and composition? By utilizing identical protocols at diverse grassland sites around the world, NutNet aims to uncover both the generalities in ecosystem functioning, and the contingencies or differences which can obscure those common mechanisms. In addition to the standard NutNet protocol, e247 includes an additional low Nitrogen gradient (1 gram Nitrogen per meter squared per year and 5 grams Nitrogen per meter squared per year in addition to the standard 10 grams Nitrogen per meter squared per year).
Data from: Plant community dynamics and carbon sequestration in Sphagnum-dominated peatlands in the era of global change
<p>Aim: Hydroclimatic shift and anthropogenic-driven nitrogen deposition are major outcomes of global change that could compromise the functioning of many peatlands as a carbon sink. For Sphagnum-dominated peatlands, an emerging hypothesis is that the change could be triggered by shifts in competitive dominance among plant functional groups, specifically from the currently predominant decay-resistant Sphagnum to the more decomposable vascular plants. However, the relationship between Sphagnum and vascular plant occurrence is notably complex and also includes facilitative interactions that are crucial to the productivity of Sphagnum and therefore carbon sequestration.</p> <p>Location: Global</p> <p>Taxa: Northern peatlands—Sphagnum moss and vascular plants</p> <p>Methods: We use a conceptual review to examine underlying mechanisms for the competitive exclusion hypothesis and the nature of facilitative interactions between Sphagnum and vascular plants under the potential global change conditions. We complement the review with an empirical study of peatlands with contrasting hydrology to provide some critical insights into the potential effects of change in plant communities on carbon sequestration. We also propose a conceptual model that presents probable combinations of global change factors and their implications for carbon sequestration.</p> <p>Results: Vegetation structure in Sphagnum-dominated peatland appears to be driven largely by hydrology, rather than competition among plant functional groups. The peat deposit also exerts some controls (e.g., nutrient immobilization) on biotic structure, thereby acting as resistance against an abrupt shift in plant communities.<br> Main conclusions: Peatland controls that constrain vegetation shifts have developed over a millennial timescale in many peatlands, and the pace of climate change may not allow enough time for the establishment of those mechanisms in younger peatlands. Thus, the persistence of a given peatland as a carbon sink also likely depends on the successional stage of the peatland.</p>
Rainfall pulses mediate long-term plant community compositional dynamics in a semi-arid rangeland
<p>1. Semi-arid rangelands, comprising more than 40% of the Earth's land surface, provide critical ecosystem services. Worldwide, these ecosystems are experiencing rapid degradation due to overgrazing and precipitation changes. However, how plants respond to these interacting factors remains relatively unexplored, and precisely which and how rainfall factors determine plant community dynamics in rangelands has not been well developed.</p> <p>2. We used a long-term (1953‒2018) dataset from semi-arid rangeland to investigate coupled effects of grazing intensity and rainfall intensity (the total amount of precipitation) on different groups of plant cover (herbaceous, woody, and cacti plants) using linear mixed-effects models, redundancy analysis and structural equation models. We examined how rainfall intensity influenced plant cover dynamics according to pulse size (intensity over time) categories, which we analyzed at three scales: yearly, within the wet season only (June to September), and within the dry season only (October to May). </p> <p>3. Plant community cover showed a humpbacked trend in the last six decades, mostly through changes in woody plants. Although both grazing intensity and rainfall presented similar humpbacked trends with plant community cover, our models demonstrated that the reduction of plant cover from the 1990s has been mainly caused by a decrease of rainfall rather than grazing intensity, particularly due to profound reductions of the intensity of relatively small rainfall pulses (e.g., 5.1 ~ 15 mm·day<sup>-1</sup>) during the dry season. Specifically, these small rainfall pulses can increase plant cover of all subgroups of woody and herbaceous species, thereby increasing plant community cover. Moreover, rainfall pulses during the wet season had negative effects on herbaceous species and positive effects on woody plants. These results suggest a phenological niche partitioning between woody plants and herbaceous in subtropical rangelands.</p> <p>4. <i>Synthesis and applications.</i><b> </b>Our results show how critical seasonal rainfall pulses are for regulating plant community compositional dynamics, which has significant implications for rangeland management and our ability to adapt and mitigate amplified climate influences in semi-arid ecosystems.</p>
Data supporting the manuscript "Initial assemblage characteristics determine the functional dynamics of flower-strip plant communities"
<p>Original data recorded by the authors.</p>
Data from: Effect of insect herbivory on plant community dynamics under contrasting water availability levels
1. Diversity of plant communities is impacted by multiple global change drivers but also by altered biotic interactions with antagonist and mutualist organisms that can potentially affect species coexistence. 2. With a two-year outdoor mesocosm experiment in realistic mesic grassland communities, we explored the role of insect herbivory in impacting plant community dynamics under contrasting levels of water availability simulating altered rainfall regimes. We selected a grasshopper species (Calliptamus italicus) feeding predominantly on forbs while avoiding grasses. 3. High water availability reduced species coexistence, boosting productivity while decreasing individual plant survival. At the community level, herbivores were not able to promote species coexistence but asymmetrically influenced grasses and forbs, reducing forb biomass under high water availability. 4. Herbivores shaped individual plant responses to both abiotic conditions and individual-neighbours' interactions. Herbivores influenced focal plant survival by altering the effect of neighbouring plants, mitigating the negative effect of high neighbour biomass at low water availability and exacerbating it at high level of water availability. 5. Synthesis: Altered rainfall has the capacity to change the relative strength of the plant-plant interactions and also to determine the effects of herbivores on grassland communities. The complexity of the interactions between plants and herbivores and the observed context-dependence indicate the need to incorporate multiple biotic and abiotic drivers to fully understand the mechanisms underlying plant dynamics and species coexistence in a changing world.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.